##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064107_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 785429 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.27044328640781 32.0 32.0 32.0 32.0 32.0 2 31.417720761520137 32.0 32.0 32.0 32.0 32.0 3 31.486087221123743 32.0 32.0 32.0 32.0 32.0 4 31.564319626598966 32.0 32.0 32.0 32.0 32.0 5 31.521753080163833 32.0 32.0 32.0 32.0 32.0 6 35.0906332717534 36.0 36.0 36.0 36.0 36.0 7 35.11881914215034 36.0 36.0 36.0 36.0 36.0 8 35.06706907944576 36.0 36.0 36.0 36.0 36.0 9 35.16947553502608 36.0 36.0 36.0 36.0 36.0 10 35.02940940556053 36.0 36.0 36.0 36.0 36.0 11 35.17414432112896 36.0 36.0 36.0 36.0 36.0 12 35.07856088838074 36.0 36.0 36.0 36.0 36.0 13 35.10901430937742 36.0 36.0 36.0 36.0 36.0 14 35.06090174923513 36.0 36.0 36.0 36.0 36.0 15 35.03647688078744 36.0 36.0 36.0 36.0 36.0 16 35.05111346792645 36.0 36.0 36.0 36.0 36.0 17 35.01263640634608 36.0 36.0 36.0 36.0 36.0 18 35.0086666013096 36.0 36.0 36.0 36.0 36.0 19 35.00369606928188 36.0 36.0 36.0 36.0 36.0 20 34.99515678692791 36.0 36.0 36.0 36.0 36.0 21 34.97963915261596 36.0 36.0 36.0 36.0 36.0 22 34.963134796397895 36.0 36.0 36.0 36.0 36.0 23 34.92567374008345 36.0 36.0 36.0 36.0 36.0 24 34.89208445320965 36.0 36.0 36.0 32.0 36.0 25 34.864645945082245 36.0 36.0 36.0 32.0 36.0 26 34.80632495107769 36.0 36.0 36.0 32.0 36.0 27 34.7964640979643 36.0 36.0 36.0 32.0 36.0 28 34.75754142003924 36.0 36.0 36.0 32.0 36.0 29 34.733147108140905 36.0 36.0 36.0 32.0 36.0 30 34.703382482694174 36.0 36.0 36.0 32.0 36.0 31 34.690451969560584 36.0 36.0 36.0 32.0 36.0 32 34.653547297082234 36.0 36.0 36.0 32.0 36.0 33 34.629001475626694 36.0 36.0 36.0 32.0 36.0 34 34.5925233216497 36.0 36.0 36.0 32.0 36.0 35 34.55449951555137 36.0 36.0 36.0 32.0 36.0 36 34.51368105837702 36.0 36.0 36.0 32.0 36.0 37 34.48831784922635 36.0 36.0 36.0 32.0 36.0 38 34.43032024536909 36.0 36.0 36.0 32.0 36.0 39 34.39314820308392 36.0 36.0 36.0 32.0 36.0 40 34.39887882927674 36.0 36.0 36.0 32.0 36.0 41 34.36168259639 36.0 36.0 36.0 32.0 36.0 42 34.28888161756187 36.0 36.0 36.0 32.0 36.0 43 34.286979472364784 36.0 36.0 36.0 32.0 36.0 44 34.18762357896131 36.0 36.0 36.0 32.0 36.0 45 34.13974655888693 36.0 36.0 36.0 32.0 36.0 46 34.06364292634981 36.0 36.0 36.0 32.0 36.0 47 34.02631937450744 36.0 36.0 36.0 32.0 36.0 48 33.963478557578085 36.0 36.0 36.0 32.0 36.0 49 33.91520939512037 36.0 36.0 36.0 32.0 36.0 50 33.33691905952034 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 5.0 20 6.0 21 28.0 22 99.0 23 267.0 24 658.0 25 1706.0 26 3254.0 27 6043.0 28 10008.0 29 15038.0 30 21229.0 31 29737.0 32 42102.0 33 66834.0 34 135229.0 35 453186.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.66468160745231 18.21046720832426 12.055637682764873 26.069213501458556 2 14.965999386321071 20.756989510164534 39.09032920946186 25.186681894052537 3 18.343930554883592 25.455739942400683 29.130433675483115 27.06989582723261 4 11.649811758924104 16.319107137627974 36.736866094834795 35.29421500861313 5 13.303557673577115 38.0844099212023 33.61144037207692 15.00059203314367 6 33.01367665445249 36.680221943251176 17.123828342835605 13.182273059460725 7 29.011533824190344 31.046345373038175 21.215412214216688 18.72670858855479 8 27.245492590673376 34.520879672128224 19.495842399503964 18.737785337694433 9 27.84281021619006 13.493417534567492 18.688981691324386 39.974790557918055 10 15.885305261871293 27.14164578622502 31.932561266271463 25.04048768563222 11 36.87144223093367 20.61561261425285 23.885927308515473 18.62701784629801 12 25.375049813541388 23.428724938855073 29.91167884048081 21.284546407122733 13 30.164000799569152 19.90201458322458 25.652801102081295 24.281183515124972 14 23.162275854693238 20.5592364927148 25.692743319565892 30.58574433302607 15 24.396607044635036 29.13258602073869 22.595086275388596 23.875720659237682 16 24.36654991399517 25.792154780684502 25.91209045849296 23.92920484682737 17 22.653734455947006 26.447330057841 26.49609321784655 24.40284226836544 18 23.489710718600918 24.86882964596418 28.879631386159666 22.761828249275236 19 25.66311063918098 24.12547569665927 26.127189414165798 24.08422424999395 20 25.769680796207904 24.676893852102623 26.05093051769556 23.50249483399391 21 26.594256132635795 23.77261343800649 25.04058291710645 24.59254751225127 22 25.65633005189527 25.14679894274205 25.68956034162266 23.507310663740025 23 23.738090721234705 24.873538515209116 26.694354718576246 24.69401604497993 24 24.971512311137765 25.00792562516949 26.545560567691208 23.47500149600154 25 24.415537125265143 25.004010582845908 26.758354107728078 23.822098184160872 26 23.208351477093025 26.211302862003024 27.454373219046747 23.125972441857208 27 23.952736255061243 25.657388779953656 26.472535587868297 23.917339377116807 28 23.146765266483065 25.69566728673524 26.636974676501186 24.52059277028051 29 23.745335232980523 24.686882885222857 26.243396752520027 25.324385129276592 30 23.289042128422423 25.47312988917862 26.74877261245111 24.48905536994785 31 24.77937291102976 24.750469520929492 25.79990450421773 24.670253063823015 32 23.82919829590452 25.928887372326525 25.71880387368507 24.523110458083885 33 23.504546108528555 25.36411521816355 26.875834768913048 24.25550390439485 34 24.38465103487614 25.461925521512384 26.77436440677966 23.379059036831812 35 24.456871185875276 25.645560304709814 26.594881863196346 23.302686646218564 36 23.408232308634542 26.040243503372302 26.339211249743748 24.212312938249408 37 24.346602664901102 25.880735171474228 25.4693498176077 24.303312346016973 38 24.030956425189913 26.1641128549637 25.77983146625378 24.02509925359261 39 25.002578307331685 24.965781723684394 25.49468486718216 24.53695510180176 40 25.659784468709258 25.51119927477184 25.878269638200784 22.95074661831812 41 24.321306432596646 25.349564429097814 27.000684996040263 23.328444142265276 42 25.137507448320118 26.723554007323546 25.690847606097183 22.448090938259156 43 23.5572950419968 26.122683873662016 26.419341572693234 23.90067951164795 44 23.339996435028393 26.430062896284788 25.456952967838863 24.772987700847953 45 23.595146545797153 26.707112118357056 25.575615594204375 24.122125741641415 46 23.96829741859503 25.55660947894452 25.246586243116788 25.228506859343668 47 24.97373993045697 25.681138458365215 25.568840851883024 23.776280759294792 48 24.684911798221325 26.18666564809687 24.572614477696504 24.555808075985308 49 24.473280809953298 26.087050627173973 25.09587129565027 24.34379726722246 50 24.13708369301442 27.080993814758507 24.450547351855956 24.331375140371115 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 22.0 1 19.0 2 16.0 3 59.0 4 102.0 5 123.5 6 145.0 7 150.0 8 155.0 9 228.0 10 301.0 11 486.0 12 671.0 13 1250.0 14 1829.0 15 2561.5 16 3294.0 17 3678.0 18 4062.0 19 4026.5 20 3991.0 21 4115.5 22 4240.0 23 4575.5 24 4911.0 25 5235.5 26 5560.0 27 7562.5 28 9565.0 29 11405.0 30 13245.0 31 15349.5 32 17454.0 33 21344.0 34 25234.0 35 29879.5 36 34525.0 37 37210.0 38 39895.0 39 39105.0 40 38315.0 41 38926.5 42 39538.0 43 38773.5 44 38009.0 45 41558.0 46 45107.0 47 47848.0 48 50589.0 49 52802.0 50 55015.0 51 53493.5 52 51972.0 53 51414.0 54 50856.0 55 51430.5 56 52005.0 57 50599.5 58 49194.0 59 45080.5 60 40967.0 61 36108.5 62 31250.0 63 27184.0 64 23118.0 65 19678.5 66 16239.0 67 13652.5 68 11066.0 69 9922.0 70 8778.0 71 6885.0 72 4992.0 73 4227.5 74 3463.0 75 2735.5 76 2008.0 77 1732.5 78 1457.0 79 1198.5 80 940.0 81 758.5 82 577.0 83 469.0 84 361.0 85 278.5 86 196.0 87 142.5 88 89.0 89 66.5 90 44.0 91 37.0 92 30.0 93 23.5 94 17.0 95 13.5 96 10.0 97 7.5 98 5.0 99 5.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007893775248940388 2 2.5463791125614156E-4 3 3.8195686688421234E-4 4 0.0 5 0.0 6 3.8195686688421234E-4 7 0.0 8 0.0 9 0.001145870600652637 10 6.365947781403539E-4 11 0.0 12 0.0 13 7.639137337684247E-4 14 1.2731895562807078E-4 15 0.004710801358238619 16 0.0010185516450245662 17 0.0 18 0.0 19 2.5463791125614156E-4 20 7.639137337684247E-4 21 0.0 22 1.2731895562807078E-4 23 0.0015278274675368493 24 2.5463791125614156E-4 25 8.912326893964955E-4 26 0.004456163446982477 27 0.006238628825775468 28 0.004074206580098265 29 0.0025463791125614156 30 0.002673698068189486 31 0.006875223603915822 32 0.003437611801957911 33 0.004074206580098265 34 0.002673698068189486 35 0.00331029284632984 36 0.007639137337684246 37 0.004328844491354407 38 0.008530370027080741 39 0.003819568668842123 40 0.002673698068189486 41 0.0029283359794456277 42 0.0021644222456772035 43 0.0015278274675368493 44 0.001145870600652637 45 0.001145870600652637 46 5.092758225122831E-4 47 0.0020371032900491325 48 0.001782465378792991 49 1.2731895562807078E-4 50 0.0014005085119087786 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 785429.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.07669991510141 #Duplication Level Percentage of deduplicated Percentage of total 1 75.16489056063514 39.895043404382704 2 14.224343964978543 15.099624722366997 3 4.694554482975087 7.475143785838881 4 2.055002969553974 4.3629110375863425 5 1.102920489978938 2.926968993841436 6 0.649901804654898 2.0696785835970526 7 0.39808072242625014 1.4790167732343402 8 0.2730953381997297 1.1595999451072148 9 0.21419819176444221 1.0232039831974782 >10 1.0293250669769 9.929477537481846 >50 0.09889385323844943 3.7258575789296646 >100 0.088762493892501 8.828417080210333 >500 0.006030060725147226 2.0250565742257467 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 898 0.11433242215400756 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 824 0.10491081943753032 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 815 0.10376494883687767 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 1.2731895562807078E-4 0.0 10 0.0 0.0 0.0 1.2731895562807078E-4 0.0 11 0.0 0.0 0.0 2.5463791125614156E-4 0.0 12 0.0 0.0 0.0 2.5463791125614156E-4 0.0 13 0.0 0.0 0.0 2.5463791125614156E-4 0.0 14 0.0 0.0 0.0 2.5463791125614156E-4 0.0 15 0.0 0.0 0.0 2.5463791125614156E-4 1.2731895562807078E-4 16 0.0 0.0 0.0 3.8195686688421234E-4 1.2731895562807078E-4 17 0.0 0.0 0.0 3.8195686688421234E-4 1.2731895562807078E-4 18 0.0 0.0 0.0 3.8195686688421234E-4 1.2731895562807078E-4 19 0.0 0.0 0.0 3.8195686688421234E-4 1.2731895562807078E-4 20 0.0 0.0 0.0 5.092758225122831E-4 2.5463791125614156E-4 21 0.0 0.0 0.0 5.092758225122831E-4 5.092758225122831E-4 22 0.0 0.0 0.0 0.0010185516450245662 5.092758225122831E-4 23 0.0 0.0 0.0 0.0014005085119087786 5.092758225122831E-4 24 0.0 0.0 0.0 0.002164422245677203 5.092758225122831E-4 25 0.0 0.0 0.0 0.0025463791125614156 5.092758225122831E-4 26 0.0 0.0 0.0 0.002673698068189486 6.365947781403539E-4 27 0.0 0.0 0.0 0.0030556549350736987 6.365947781403539E-4 28 0.0 0.0 0.0 0.004201525535726336 7.639137337684247E-4 29 0.0 0.0 0.0 0.0064932667370316095 7.639137337684247E-4 30 0.0 0.0 0.0 0.011840662873410582 7.639137337684247E-4 31 0.0 0.0 0.0 0.023554006791193093 7.639137337684247E-4 32 0.0 0.0 0.0 0.03845032459967737 7.639137337684247E-4 33 0.0 0.0 0.0 0.049781711650575676 7.639137337684247E-4 34 0.0 0.0 0.0 0.06264092616901082 0.0012731895562807078 35 0.0 0.0 0.0 0.07791920084437931 0.0012731895562807078 36 0.0 0.0 0.0 0.10287371614748118 0.0012731895562807078 37 0.0 0.0 0.0 0.13712251521143223 0.0012731895562807078 38 0.0 0.0 0.0 0.1885593732851728 0.0012731895562807078 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCACGAG 35 3.2165716E-4 31.429026 35 CGTAAAT 70 1.1319116E-6 25.141619 16 TCTAGAT 190 0.0 21.998917 2 GTATTAC 65 4.927451E-4 20.309278 1 CTACTAG 55 0.0044818637 20.000288 35 CTATACC 55 0.0044835154 19.999016 4 ATACACT 450 0.0 19.554594 4 TTAGGAC 530 0.0 19.508474 3 CTAGGAC 170 5.456968E-12 19.410809 3 TGTAGGA 930 0.0 19.396896 2 CACGTAT 80 8.973686E-5 19.25273 28 CTAGATA 195 0.0 19.178545 3 GATATAC 460 0.0 19.13193 1 CCTAATA 70 8.1225514E-4 18.856215 2 CTTGCAC 70 8.1225514E-4 18.856215 3 TAGGACC 760 0.0 18.814863 4 ACTGTTC 480 0.0 18.790743 8 AATCGTA 95 1.5966256E-5 18.525404 13 GTAGGAC 905 0.0 18.47423 3 GTCCTAC 715 0.0 18.46298 1 >>END_MODULE