##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064106_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1786701 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.327558444306014 32.0 32.0 32.0 32.0 32.0 2 31.435316261646463 32.0 32.0 32.0 32.0 32.0 3 31.503782669847947 32.0 32.0 32.0 32.0 32.0 4 31.583460243208012 32.0 32.0 32.0 32.0 32.0 5 31.543694776014565 32.0 32.0 32.0 32.0 32.0 6 35.13352989672027 36.0 36.0 36.0 36.0 36.0 7 35.150617254929614 36.0 36.0 36.0 36.0 36.0 8 35.10071131095802 36.0 36.0 36.0 36.0 36.0 9 35.196268429916366 36.0 36.0 36.0 36.0 36.0 10 35.06223760998623 36.0 36.0 36.0 36.0 36.0 11 35.20354664826404 36.0 36.0 36.0 36.0 36.0 12 35.10659645906058 36.0 36.0 36.0 36.0 36.0 13 35.14703131637582 36.0 36.0 36.0 36.0 36.0 14 35.08961040487468 36.0 36.0 36.0 36.0 36.0 15 35.064126566224566 36.0 36.0 36.0 36.0 36.0 16 35.0797441765578 36.0 36.0 36.0 36.0 36.0 17 35.04300271841791 36.0 36.0 36.0 36.0 36.0 18 35.03358536207233 36.0 36.0 36.0 36.0 36.0 19 35.03996303802371 36.0 36.0 36.0 36.0 36.0 20 35.0280203570715 36.0 36.0 36.0 36.0 36.0 21 35.02708567354023 36.0 36.0 36.0 36.0 36.0 22 35.003983878668 36.0 36.0 36.0 36.0 36.0 23 34.95587566134457 36.0 36.0 36.0 36.0 36.0 24 34.924518987788105 36.0 36.0 36.0 36.0 36.0 25 34.89930212161968 36.0 36.0 36.0 32.0 36.0 26 34.83935084829527 36.0 36.0 36.0 32.0 36.0 27 34.82766898322663 36.0 36.0 36.0 32.0 36.0 28 34.809291537867836 36.0 36.0 36.0 32.0 36.0 29 34.77837981844752 36.0 36.0 36.0 32.0 36.0 30 34.76391629041457 36.0 36.0 36.0 32.0 36.0 31 34.74913261927989 36.0 36.0 36.0 32.0 36.0 32 34.716743876003875 36.0 36.0 36.0 32.0 36.0 33 34.68823043139283 36.0 36.0 36.0 32.0 36.0 34 34.68555287090565 36.0 36.0 36.0 32.0 36.0 35 34.6364086660275 36.0 36.0 36.0 32.0 36.0 36 34.60968791084798 36.0 36.0 36.0 32.0 36.0 37 34.59754206215813 36.0 36.0 36.0 32.0 36.0 38 34.556710943800894 36.0 36.0 36.0 32.0 36.0 39 34.554262856516004 36.0 36.0 36.0 32.0 36.0 40 34.530553237503085 36.0 36.0 36.0 32.0 36.0 41 34.51545837831848 36.0 36.0 36.0 32.0 36.0 42 34.44411627910882 36.0 36.0 36.0 32.0 36.0 43 34.42909417972005 36.0 36.0 36.0 32.0 36.0 44 34.38149975849345 36.0 36.0 36.0 32.0 36.0 45 34.336396520738504 36.0 36.0 36.0 32.0 36.0 46 34.32041455173529 36.0 36.0 36.0 32.0 36.0 47 34.282520130676595 36.0 36.0 36.0 32.0 36.0 48 34.24305241895538 36.0 36.0 36.0 32.0 36.0 49 34.229404920017394 36.0 36.0 36.0 32.0 36.0 50 33.63874593454641 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 1.0 19 3.0 20 20.0 21 61.0 22 193.0 23 582.0 24 1484.0 25 3533.0 26 6884.0 27 12501.0 28 20445.0 29 31091.0 30 44371.0 31 61982.0 32 89387.0 33 141694.0 34 296698.0 35 1075769.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.52324210681865 17.968063443232793 11.921242265784963 26.587452184163595 2 15.756699244526484 20.649031115568757 37.13181999827614 26.462449641628616 3 17.835033024625886 24.71969225895605 29.088759873666326 28.356514842751736 4 12.086241626326958 16.246590783796506 36.376539779179616 35.290627810696925 5 14.031278876543976 37.151151759583726 33.69489354962022 15.122675814252077 6 33.78215084275716 36.03832775039948 16.99098055348003 13.188540853363333 7 29.71323093593269 30.70075037821144 21.305939052968633 18.28007963288724 8 27.994546364298834 33.13503457215489 19.554116028562184 19.316303034984088 9 27.64253943485155 13.778564836140308 18.377203317212192 40.20169241179595 10 15.504812266746665 27.04328241591686 32.237149938097616 25.214755379238856 11 37.091208881620375 20.887658315521175 22.92621988793872 19.094912914919732 12 24.676512384010962 23.642090805446244 29.221374165430213 22.46002264511258 13 29.641074319986704 19.55736100158225 25.266120144871003 25.535444533560046 14 23.515080349427098 19.588782870728988 25.514860950044106 31.381275829799808 15 25.089399905408772 27.453844797622345 22.342112406843032 25.11464289012585 16 25.534970590819768 25.55075399328478 24.24789568626178 24.666379729633675 17 23.992654618763858 25.80806749422539 25.494360835976472 24.70491705103428 18 24.700563947227614 24.895113427496177 26.480221549097436 23.92410107617877 19 25.57266157012281 24.848701601443107 25.51389404270776 24.06474278572632 20 25.781837679550097 24.379634273023605 25.12772235555396 24.710805691872338 21 26.544620504494038 24.222351697346113 24.675925070842855 24.557102727316995 22 25.690757862133314 24.480703779096288 25.033959311511687 24.794579047258715 23 24.33074268392473 24.24874711896129 25.657391746264864 25.763118450849117 24 24.8794562026535 24.86009083811171 25.31221053397474 24.948242425260048 25 24.855763741344145 24.49441749148687 25.51000418660153 25.139814580567453 26 24.67654880160037 25.163845558384658 25.760400673685247 24.39920496632973 27 25.152680920804066 24.88529690149107 24.99354908766468 24.968473090040185 28 24.496085327983916 24.894325124873223 25.66718459296143 24.942404954181434 29 24.623889607492934 24.800085971288052 25.510748369987734 25.06527605123128 30 24.54519148050157 25.08475449043479 25.709897566985013 24.66015646207863 31 25.200987600143964 24.675562381860487 24.949609667331448 25.1738403506641 32 24.68812757888044 24.969943379371642 24.80376440982678 25.53816463192114 33 24.48067936368984 24.634266066574014 25.455148932645177 25.429905637090965 34 25.14177482150813 24.674192168970063 25.516221547086253 24.667811462435548 35 25.39220377973117 24.74265868518192 25.589725937306724 24.275411597780185 36 24.65187326272472 25.05986358156056 25.266573452250746 25.021689703463974 37 25.350510772654534 24.914040972636958 24.977345325524862 24.758102929183643 38 24.754973574648677 24.868097139613845 25.351880896167007 25.025048389570465 39 25.27245687790249 24.607791390748865 24.880150317947983 25.239601413400663 40 25.486203501639103 24.883510975015238 25.37247103376209 24.257814489583573 41 24.682881506295352 25.00174909816499 25.620957834140718 24.694411561398944 42 25.641601130151574 25.31333553109904 25.16965986310793 23.87540347564146 43 24.847804051879553 24.57360787652161 25.50181146340385 25.07677660819499 44 24.64285474413825 25.06128726769607 25.031119379761655 25.264738608404024 45 24.656176399473434 25.220185909892805 25.156715950101642 24.966921740532115 46 24.537661514833676 24.849637147824062 25.207675921458705 25.405025415883557 47 24.85032135363116 24.720022432906973 25.637543999673134 24.792112213788737 48 25.3886616472 25.2441448884053 24.732795117549998 24.634398346844698 49 24.726533728253106 25.326972975756313 24.854143859154235 25.092349436836344 50 24.69840406299569 25.63193262071953 24.785773694185025 24.88388962209976 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 99.0 1 76.0 2 53.0 3 164.0 4 275.0 5 305.5 6 336.0 7 324.0 8 312.0 9 435.5 10 559.0 11 813.0 12 1067.0 13 1922.0 14 2777.0 15 3642.5 16 4508.0 17 4835.5 18 5163.0 19 5106.5 20 5050.0 21 5719.5 22 6389.0 23 7500.5 24 8612.0 25 10013.0 26 11414.0 27 13926.0 28 16438.0 29 19712.0 30 22986.0 31 26700.5 32 30415.0 33 35572.5 34 40730.0 35 46509.0 36 52288.0 37 60196.5 38 68105.0 39 72936.0 40 77767.0 41 84466.5 42 91166.0 43 94170.0 44 97174.0 45 106645.0 46 116116.0 47 123253.0 48 130390.0 49 135244.5 50 140099.0 51 136622.0 52 133145.0 53 131273.0 54 129401.0 55 128658.0 56 127915.0 57 123397.0 58 118879.0 59 108808.5 60 98738.0 61 86740.0 62 74742.0 63 64428.5 64 54115.0 65 45849.0 66 37583.0 67 32612.5 68 27642.0 69 24487.5 70 21333.0 71 16501.0 72 11669.0 73 9861.5 74 8054.0 75 6362.0 76 4670.0 77 4050.5 78 3431.0 79 2804.5 80 2178.0 81 1741.0 82 1304.0 83 1109.0 84 914.0 85 629.0 86 344.0 87 235.5 88 127.0 89 105.5 90 84.0 91 60.0 92 36.0 93 36.5 94 37.0 95 37.5 96 38.0 97 27.5 98 17.0 99 17.0 100 17.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008899082722850662 2 3.9178351610034355E-4 3 2.2387629491448205E-4 4 0.0 5 0.0 6 3.3581444237172305E-4 7 1.1193814745724102E-4 8 1.6790722118586153E-4 9 0.0011193814745724103 10 9.514742533865487E-4 11 0.0 12 1.1193814745724102E-4 13 4.477525898289641E-4 14 2.7984536864310256E-4 15 0.003693958866088954 16 7.835670322006871E-4 17 0.0 18 5.037216635575846E-4 19 0.0 20 7.275979584720667E-4 21 0.0 22 2.2387629491448205E-4 23 0.0010634124008437897 24 3.3581444237172305E-4 25 0.002742484612702405 26 0.006156598110148256 27 0.007387917732177908 28 0.004981247561847225 29 0.0032462062762599895 30 0.003917835161003436 31 0.008283422911835836 32 0.004085742382189297 33 0.004925278488118605 34 0.0036379897923603335 35 0.003693958866088954 36 0.007779701248278251 37 0.005261092930490328 38 0.008899082722850662 39 0.004925278488118605 40 0.0029103918338882666 41 0.003693958866088954 42 0.0021268248016875794 43 0.0013432577694868922 44 0.001846979433044477 45 0.0016231031381299947 46 0.0012872886957582719 47 0.0022387629491448205 48 0.003190237202531369 49 5.037216635575846E-4 50 0.0021827938754162 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1786701.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.88032076936583 #Duplication Level Percentage of deduplicated Percentage of total 1 76.98682104997202 43.02048255286201 2 13.6199921777742 15.221790635405515 3 4.172275504529422 6.994442805938152 4 1.8219805755011271 4.07251435978227 5 0.9116039741559806 2.5470361245232436 6 0.5744691191272868 1.9260911189356689 7 0.3680920610102345 1.4398371709336215 8 0.252219008233504 1.127526326737562 9 0.18518722147396957 0.931348920451771 >10 0.9726610786193259 9.576543436706931 >50 0.0683393796332064 2.64442460434794 >100 0.05768657421413645 6.605476599618888 >500 0.006756307856160917 2.558625729527983 >1k 0.0019159678995083198 1.3338596142284473 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 2.2387629491448205E-4 13 0.0 0.0 0.0 0.0 2.2387629491448205E-4 14 0.0 0.0 0.0 5.596907372862051E-5 2.2387629491448205E-4 15 0.0 0.0 0.0 5.596907372862051E-5 4.477525898289641E-4 16 0.0 0.0 0.0 5.596907372862051E-5 5.037216635575846E-4 17 0.0 0.0 0.0 5.596907372862051E-5 5.037216635575846E-4 18 0.0 0.0 0.0 1.6790722118586153E-4 5.037216635575846E-4 19 0.0 0.0 0.0 1.6790722118586153E-4 5.037216635575846E-4 20 0.0 0.0 0.0 2.2387629491448205E-4 6.156598110148257E-4 21 0.0 0.0 0.0 2.2387629491448205E-4 6.156598110148257E-4 22 0.0 0.0 0.0 3.917835161003436E-4 6.716288847434461E-4 23 0.0 0.0 0.0 0.0011193814745724103 8.395361059293077E-4 24 0.0 0.0 0.0 0.0020148866542303383 8.955051796579282E-4 25 0.0 0.0 0.0 0.0027984536864310255 8.955051796579282E-4 26 0.0 0.0 0.0 0.0033021753499886102 8.955051796579282E-4 27 0.0 0.0 0.0 0.003973804234732057 8.955051796579282E-4 28 0.0 0.0 0.0 0.006772257921163082 8.955051796579282E-4 29 0.0 0.0 0.0 0.013376608621140302 8.955051796579282E-4 30 0.0 0.0 0.0 0.023451041892291996 9.514742533865487E-4 31 0.0 0.0 0.0 0.048525186922713986 9.514742533865487E-4 32 0.0 0.0 0.0 0.0730956102895784 0.0010634124008437897 33 0.0 0.0 0.0 0.09816975532000038 0.0010634124008437897 34 0.0 0.0 0.0 0.1274415808800689 0.0011753505483010308 35 0.0 0.0 0.0 0.16214240659181361 0.0011753505483010308 36 0.0 0.0 0.0 0.21133922239927105 0.0011753505483010308 37 0.0 0.0 0.0 0.2806289356753033 0.0011753505483010308 38 0.0 0.0 0.0 0.37739946415208814 0.0012313196220296513 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACCG 65 1.8154315E-5 23.689928 5 AATCGAT 65 4.930258E-4 20.309631 38 GTCCTAC 555 0.0 19.02618 1 GTATCAA 3295 0.0 18.627396 1 CGTATTA 60 0.007416556 18.332003 15 TAGGACG 505 0.0 18.29519 4 ACGACGG 470 0.0 18.253485 6 CGACGGT 460 0.0 18.172087 7 TACGACG 475 0.0 18.061342 5 GTAGGAC 610 0.0 17.670355 3 ACGGTAT 490 0.0 17.05951 9 GACGGTA 495 0.0 16.88719 8 TATGGCG 540 0.0 16.702494 16 CTACGAC 515 0.0 16.658518 4 TCCTACA 695 0.0 16.458778 2 TGGCGAG 550 0.0 16.398354 18 ATGGCGA 590 0.0 16.032288 17 AGGACGT 510 0.0 15.95918 5 TGTAGGA 650 0.0 15.906094 2 TTAGGAC 410 0.0 15.559412 3 >>END_MODULE