##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064102_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1456686 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.28891881984175 32.0 32.0 32.0 32.0 32.0 2 31.418827393137573 32.0 32.0 32.0 32.0 32.0 3 31.490915681210637 32.0 32.0 32.0 32.0 32.0 4 31.574114805798917 32.0 32.0 32.0 32.0 32.0 5 31.52061116808976 32.0 32.0 32.0 32.0 32.0 6 35.110690979387456 36.0 36.0 36.0 36.0 36.0 7 35.13235865519405 36.0 36.0 36.0 36.0 36.0 8 35.07619624270433 36.0 36.0 36.0 36.0 36.0 9 35.18090240449898 36.0 36.0 36.0 36.0 36.0 10 35.03347049398429 36.0 36.0 36.0 36.0 36.0 11 35.185013105089226 36.0 36.0 36.0 36.0 36.0 12 35.08431329744365 36.0 36.0 36.0 36.0 36.0 13 35.12838937149118 36.0 36.0 36.0 36.0 36.0 14 35.070188084460206 36.0 36.0 36.0 36.0 36.0 15 35.049287904188 36.0 36.0 36.0 36.0 36.0 16 35.052137523117544 36.0 36.0 36.0 36.0 36.0 17 35.01781784131927 36.0 36.0 36.0 36.0 36.0 18 35.013630940367385 36.0 36.0 36.0 36.0 36.0 19 35.017982598857955 36.0 36.0 36.0 36.0 36.0 20 35.007441548830705 36.0 36.0 36.0 36.0 36.0 21 35.00039198564413 36.0 36.0 36.0 36.0 36.0 22 34.988946142133585 36.0 36.0 36.0 36.0 36.0 23 34.936503817569466 36.0 36.0 36.0 36.0 36.0 24 34.90165485217816 36.0 36.0 36.0 32.0 36.0 25 34.877587208224696 36.0 36.0 36.0 32.0 36.0 26 34.819372877888576 36.0 36.0 36.0 32.0 36.0 27 34.81367501300898 36.0 36.0 36.0 32.0 36.0 28 34.79290595227798 36.0 36.0 36.0 32.0 36.0 29 34.76006290992019 36.0 36.0 36.0 32.0 36.0 30 34.746721668225 36.0 36.0 36.0 32.0 36.0 31 34.73520305680154 36.0 36.0 36.0 32.0 36.0 32 34.68935103378491 36.0 36.0 36.0 32.0 36.0 33 34.671578500788776 36.0 36.0 36.0 32.0 36.0 34 34.654836388899184 36.0 36.0 36.0 32.0 36.0 35 34.6142497422231 36.0 36.0 36.0 32.0 36.0 36 34.58890454085506 36.0 36.0 36.0 32.0 36.0 37 34.576900581182215 36.0 36.0 36.0 32.0 36.0 38 34.53011218615405 36.0 36.0 36.0 32.0 36.0 39 34.5253060714526 36.0 36.0 36.0 32.0 36.0 40 34.506097401910914 36.0 36.0 36.0 32.0 36.0 41 34.48216362345763 36.0 36.0 36.0 32.0 36.0 42 34.41013505999234 36.0 36.0 36.0 32.0 36.0 43 34.40060795531775 36.0 36.0 36.0 32.0 36.0 44 34.33399442295732 36.0 36.0 36.0 32.0 36.0 45 34.29377916723302 36.0 36.0 36.0 32.0 36.0 46 34.25545244479593 36.0 36.0 36.0 32.0 36.0 47 34.23029328214866 36.0 36.0 36.0 32.0 36.0 48 34.17801777459246 36.0 36.0 36.0 32.0 36.0 49 34.1548844431813 36.0 36.0 36.0 32.0 36.0 50 33.56860229315034 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 2.0 19 2.0 20 14.0 21 59.0 22 161.0 23 503.0 24 1272.0 25 2958.0 26 5763.0 27 10359.0 28 17120.0 29 25704.0 30 36673.0 31 51504.0 32 74329.0 33 119387.0 34 250079.0 35 860795.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.84749735338581 18.02903792313216 11.76957224398556 26.353892479496466 2 15.933810950410388 20.603003001353766 37.274589544964016 26.18859650327183 3 17.769928879369527 24.86414311997144 29.098429304994923 28.267498695664113 4 11.990573122828119 16.053974569673905 36.61647053654665 35.33898177095132 5 13.896337302617038 37.416986227642745 33.44028843553106 15.246388034209158 6 33.455185513938176 36.41080454704284 16.99930595743892 13.13470398158007 7 29.999395889024814 30.79483155601139 21.034938209058097 18.170834345905707 8 28.075096486133592 32.81345464980099 19.50269309926779 19.608755764797632 9 27.81572203431253 13.502312467691699 18.4337690992257 40.24819639877007 10 15.612278382122561 26.48272708924577 31.82784892158438 26.077145607047285 11 37.126875661604494 20.896473227586455 23.034133643077507 18.942517467731548 12 24.93407977702798 23.716177485180392 28.98457799730209 22.365164740489536 13 29.54017946325781 19.46162395644333 25.464190070962882 25.534006509335978 14 23.639084633946254 19.701308107106204 25.47819192206963 31.18141533687791 15 25.17751749430358 27.52974872598631 22.30936478154518 24.983368998164927 16 25.627575639623608 25.58782763783598 24.020081322077576 24.764515400462834 17 23.846388308805054 25.88842070288312 25.330510487503826 24.934680500808 18 24.734019548481964 24.73175413232502 26.56392661150035 23.970299707692668 19 25.61567832738147 24.554845725159712 25.727232910867542 24.102243036591275 20 25.986749293082816 23.96989861170321 25.200439081553426 24.842913013660546 21 27.140509347930852 23.789546957957995 24.537546183597563 24.53239751051359 22 26.074495223397797 24.113259979515117 25.06377498482856 24.748469812258527 23 24.28570055578744 24.079339755277786 25.767502910744494 25.867456778190284 24 24.78219291964805 24.62519196061727 25.638112446187527 24.954502673547157 25 24.817887557451833 24.27376420634948 25.76409650878211 25.144251727416584 26 24.527690494219833 25.163409237418982 26.050806696878183 24.258093571483002 27 25.27914167710187 24.67836233221292 25.10442068147367 24.938075309211538 28 24.365986490763287 24.584778732872316 25.930484892213755 25.118749884150642 29 24.437493950163766 24.636100205196716 25.725860209480512 25.200545635159006 30 24.282714224614644 24.896731306427064 26.103003013104843 24.71755145585345 31 25.21952016564762 24.607747156707536 24.936186397507594 25.23654628013725 32 24.765351039787348 24.877732651217457 24.86036395989686 25.49655234909834 33 24.30433364798764 24.532120483995538 25.56766497897537 25.59588088904145 34 25.304996303179127 24.522176462955933 25.698500058696045 24.4743271751689 35 25.865393790817144 24.395993818689334 25.435708945669134 24.302903444824388 36 24.51576538693114 25.006916901749786 25.27370677966218 25.20361093165689 37 25.508291662204353 24.850409571590586 24.997665867569562 24.64363289863549 38 24.61580921728337 24.754834652415816 25.472137243163377 25.157218887137432 39 25.34948844214965 24.59507534176513 24.95213262951651 25.103303586568714 40 25.532522524254247 24.764665822722243 25.41135425619846 24.29145739682505 41 24.511446157817343 25.166718612483745 25.734941777205993 24.58689345249292 42 25.794180926476905 25.227472749265782 25.16918864963499 23.80915767462232 43 24.842912150941636 24.49520103743541 25.49227037851427 25.169616433108686 44 24.533492051069768 25.12943870763122 25.04348948357697 25.293579757722046 45 24.78823231390565 25.3414816152216 24.888529773791817 24.98175629708094 46 24.490155978941026 24.95978844914191 25.140749009213476 25.409306562703588 47 24.849725125354922 24.82137267070512 25.502998632491774 24.825903571448187 48 25.452218822490767 25.35645120210675 24.522346121342725 24.66898385405976 49 24.758063021347844 25.368354499028957 24.782708087769386 25.090874391853813 50 24.781229426435626 25.79402373781719 24.495027333020747 24.92971950272644 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 113.0 1 78.0 2 43.0 3 152.0 4 261.0 5 274.0 6 287.0 7 284.5 8 282.0 9 415.5 10 549.0 11 774.5 12 1000.0 13 1822.0 14 2644.0 15 3466.5 16 4289.0 17 4639.5 18 4990.0 19 5068.0 20 5146.0 21 5485.5 22 5825.0 23 6552.0 24 7279.0 25 8019.5 26 8760.0 27 10763.0 28 12766.0 29 14991.5 30 17217.0 31 20457.5 32 23698.0 33 28071.5 34 32445.0 35 37396.0 36 42347.0 37 48897.0 38 55447.0 39 60587.5 40 65728.0 41 71082.0 42 76436.0 43 78265.5 44 80095.0 45 86934.5 46 93774.0 47 99906.0 48 106038.0 49 109163.5 50 112289.0 51 108416.0 52 104543.0 53 102829.0 54 101115.0 55 101879.0 56 102643.0 57 99494.5 58 96346.0 59 87635.5 60 78925.0 61 69390.0 62 59855.0 63 52977.5 64 46100.0 65 39333.0 66 32566.0 67 28639.5 68 24713.0 69 22246.0 70 19779.0 71 15334.0 72 10889.0 73 9233.0 74 7577.0 75 5855.0 76 4133.0 77 3632.5 78 3132.0 79 2575.0 80 2018.0 81 1581.0 82 1144.0 83 962.5 84 781.0 85 538.5 86 296.0 87 219.5 88 143.0 89 110.0 90 77.0 91 62.0 92 47.0 93 44.0 94 41.0 95 41.0 96 41.0 97 30.5 98 20.0 99 17.0 100 14.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007414089240920831 2 6.864897445297064E-4 3 4.118938467178239E-4 4 0.0 5 0.0 6 2.0594692335891194E-4 7 0.0 8 0.0 9 0.001167032565700501 10 8.237876934356477E-4 11 0.0 12 6.864897445297064E-5 13 6.178407700767358E-4 14 6.864897445297064E-5 15 0.004736779237254974 16 6.178407700767358E-4 17 0.0 18 0.0 19 0.0 20 6.178407700767358E-4 21 0.0 22 1.3729794890594127E-4 23 9.610856423415891E-4 24 4.8054282117079454E-4 25 0.00212811820804209 26 0.004599481288349033 27 0.005354620007331711 28 0.0036383956460074446 29 0.0024027141058539725 30 0.0033637997481955617 31 0.006864897445297065 32 0.002883256927024767 33 0.0041875874416312095 34 0.001990820259136149 35 0.002540012054759914 36 0.007482738215373801 37 0.002883256927024767 38 0.008100578985450538 39 0.0039129915438193275 40 0.002334065131401002 41 0.0027459589781188257 42 0.0019221712846831782 43 0.001167032565700501 44 8.237876934356477E-4 45 0.0013043305146064423 46 0.0010297346167945597 47 0.0015102774379653543 48 0.0024027141058539725 49 3.432448722648532E-4 50 0.001578926412418325 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1456686.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.518334954535796 #Duplication Level Percentage of deduplicated Percentage of total 1 75.77528634944507 39.03816583426575 2 13.894384854688266 14.316311458621184 3 4.540721909572939 7.017912968183341 4 1.9292008082422578 3.9755685373434333 5 1.0048732907991702 2.5884699391129153 6 0.601294285454175 1.8586608242565867 7 0.404612945650577 1.459148968267747 8 0.2770709886132153 1.1419388798047998 9 0.2055770075187373 0.9531886619071289 >10 1.191509614661692 11.193906823714814 >50 0.0883076135602036 3.139824391643061 >100 0.07495794346649792 8.12117203801474 >500 0.009386452559380684 3.3343146182475305 >1k 0.0028159357678142053 1.8614160566170739 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1729 0.11869407682918624 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1645 0.1129275629751367 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1523 0.1045523880918743 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 1463 0.10043344962469605 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.864897445297065E-5 2 0.0 0.0 0.0 0.0 6.864897445297065E-5 3 0.0 0.0 0.0 1.372979489059413E-4 6.864897445297065E-5 4 0.0 0.0 0.0 1.372979489059413E-4 6.864897445297065E-5 5 0.0 0.0 0.0 1.372979489059413E-4 6.864897445297065E-5 6 0.0 0.0 0.0 1.372979489059413E-4 6.864897445297065E-5 7 0.0 0.0 0.0 1.372979489059413E-4 6.864897445297065E-5 8 0.0 0.0 0.0 1.372979489059413E-4 6.864897445297065E-5 9 0.0 0.0 0.0 1.372979489059413E-4 6.864897445297065E-5 10 0.0 0.0 0.0 2.0594692335891194E-4 6.864897445297065E-5 11 0.0 0.0 0.0 2.0594692335891194E-4 6.864897445297065E-5 12 0.0 0.0 0.0 2.745958978118826E-4 2.0594692335891194E-4 13 0.0 0.0 0.0 2.745958978118826E-4 2.0594692335891194E-4 14 0.0 0.0 0.0 3.432448722648532E-4 2.0594692335891194E-4 15 0.0 0.0 0.0 3.432448722648532E-4 2.745958978118826E-4 16 0.0 0.0 0.0 4.118938467178239E-4 2.745958978118826E-4 17 0.0 0.0 0.0 4.118938467178239E-4 2.745958978118826E-4 18 0.0 0.0 0.0 4.118938467178239E-4 3.432448722648532E-4 19 0.0 0.0 0.0 4.118938467178239E-4 3.432448722648532E-4 20 0.0 0.0 0.0 4.118938467178239E-4 6.178407700767358E-4 21 0.0 0.0 0.0 5.491917956237652E-4 6.178407700767358E-4 22 0.0 0.0 0.0 8.237876934356477E-4 6.178407700767358E-4 23 0.0 0.0 0.0 0.0015789264124183248 6.178407700767358E-4 24 0.0 0.0 0.0 0.0024713630803069432 6.178407700767358E-4 25 0.0 0.0 0.0 0.0032265017992896203 6.178407700767358E-4 26 0.0 0.0 0.0 0.003981640518272297 6.178407700767358E-4 27 0.0 0.0 0.0 0.005217322058425769 6.178407700767358E-4 28 0.0 0.0 0.0 0.008100578985450536 6.178407700767358E-4 29 0.0 0.0 0.0 0.013935741813953042 6.178407700767358E-4 30 0.0 0.0 0.0 0.024027141058539727 6.178407700767358E-4 31 0.0 0.0 0.0 0.05313430622659928 6.178407700767358E-4 32 0.0 0.0 0.0 0.08272201421582963 6.178407700767358E-4 33 0.0 0.0 0.0 0.11031890194592384 6.864897445297064E-4 34 0.0 0.0 0.0 0.1407990466030428 7.551387189826771E-4 35 0.0 0.0 0.0 0.17649651331858754 7.551387189826771E-4 36 0.0 0.0 0.0 0.23182758672768186 7.551387189826771E-4 37 0.0 0.0 0.0 0.3059684791368902 7.551387189826771E-4 38 0.0 0.0 0.0 0.4040678636301852 7.551387189826771E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTACGG 35 3.2189643E-4 31.42727 42 TAGATCG 50 2.3626544E-6 30.798725 5 GTATCGA 45 4.07126E-5 29.332119 9 TCGTACG 45 0.0013986882 24.443434 41 CCCTATA 65 4.933064E-4 20.30755 2 TATCGAG 65 4.934206E-4 20.306854 10 TATGCGA 80 8.9930385E-5 19.249205 17 TTAGATC 140 4.08545E-9 18.856363 4 TACCGTA 85 1.4315412E-4 18.116898 12 GTATCAA 3280 0.0 18.043795 1 GTGTATA 220 0.0 18.001108 1 TAGGACG 360 0.0 17.721489 4 GGCGTTA 370 0.0 17.24253 42 CGCAATA 445 0.0 16.809448 36 ACCGTCG 460 0.0 16.738438 8 TAATACT 265 0.0 16.603088 4 GACAGTA 120 6.4108663E-6 16.499317 7 TAATCCC 325 0.0 16.245481 5 AGTATCG 95 3.3479568E-4 16.209856 8 TTAGGAC 340 0.0 16.1758 3 >>END_MODULE