##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064100_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 896295 Sequences flagged as poor quality 0 Sequence length 50 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.40613525680719 32.0 32.0 32.0 32.0 32.0 2 31.51844872502915 32.0 32.0 32.0 32.0 32.0 3 31.559553495221998 32.0 32.0 32.0 32.0 32.0 4 31.619197920327572 32.0 32.0 32.0 32.0 32.0 5 31.607416085105907 32.0 32.0 32.0 32.0 32.0 6 35.179183193033545 36.0 36.0 36.0 36.0 36.0 7 35.199260288186366 36.0 36.0 36.0 36.0 36.0 8 35.158138782432125 36.0 36.0 36.0 36.0 36.0 9 35.24563341310618 36.0 36.0 36.0 36.0 36.0 10 35.149519968314 36.0 36.0 36.0 36.0 36.0 11 35.26738406439844 36.0 36.0 36.0 36.0 36.0 12 35.18247228869959 36.0 36.0 36.0 36.0 36.0 13 35.229205786041426 36.0 36.0 36.0 36.0 36.0 14 35.18340836443358 36.0 36.0 36.0 36.0 36.0 15 35.16983136132635 36.0 36.0 36.0 36.0 36.0 16 35.1754020718625 36.0 36.0 36.0 36.0 36.0 17 35.160325562454325 36.0 36.0 36.0 36.0 36.0 18 35.16657238967081 36.0 36.0 36.0 36.0 36.0 19 35.152776708561355 36.0 36.0 36.0 36.0 36.0 20 35.14628554214851 36.0 36.0 36.0 36.0 36.0 21 35.13784970350164 36.0 36.0 36.0 36.0 36.0 22 35.12877568211359 36.0 36.0 36.0 36.0 36.0 23 35.101955271422916 36.0 36.0 36.0 36.0 36.0 24 35.07477002549384 36.0 36.0 36.0 36.0 36.0 25 35.05647247836929 36.0 36.0 36.0 36.0 36.0 26 35.026175533724945 36.0 36.0 36.0 36.0 36.0 27 34.9871470888491 36.0 36.0 36.0 36.0 36.0 28 34.98400303471513 36.0 36.0 36.0 36.0 36.0 29 34.945871615930024 36.0 36.0 36.0 36.0 36.0 30 34.92657551364227 36.0 36.0 36.0 36.0 36.0 31 34.92025058713928 36.0 36.0 36.0 36.0 36.0 32 34.90260126409274 36.0 36.0 36.0 36.0 36.0 33 34.910962350565384 36.0 36.0 36.0 36.0 36.0 34 34.902218577588854 36.0 36.0 36.0 36.0 36.0 35 34.87391316475045 36.0 36.0 36.0 36.0 36.0 36 34.83198277352881 36.0 36.0 36.0 36.0 36.0 37 34.812052951316254 36.0 36.0 36.0 36.0 36.0 38 34.80187884569254 36.0 36.0 36.0 36.0 36.0 39 34.748273726842164 36.0 36.0 36.0 32.0 36.0 40 34.75635477158748 36.0 36.0 36.0 32.0 36.0 41 34.7405976826826 36.0 36.0 36.0 32.0 36.0 42 34.731049487055046 36.0 36.0 36.0 32.0 36.0 43 34.715989713208266 36.0 36.0 36.0 32.0 36.0 44 34.665106912344704 36.0 36.0 36.0 32.0 36.0 45 34.62591111185491 36.0 36.0 36.0 32.0 36.0 46 34.56409552658444 36.0 36.0 36.0 32.0 36.0 47 34.55997969418551 36.0 36.0 36.0 32.0 36.0 48 34.53323403566906 36.0 36.0 36.0 32.0 36.0 49 34.51678074741017 36.0 36.0 36.0 32.0 36.0 50 33.953968280532635 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 5.0 21 15.0 22 49.0 23 171.0 24 448.0 25 1153.0 26 2481.0 27 4575.0 28 8123.0 29 12926.0 30 19074.0 31 27230.0 32 39843.0 33 63250.0 34 135063.0 35 581887.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.49430935675647 23.50715458911324 13.92065234856194 25.07788370556835 2 12.764326605205698 23.187327273518417 42.41108037938741 21.63726574188848 3 15.316402876734642 28.35799414031557 32.3960664692612 23.92953651368859 4 9.79030341572808 19.951913153593402 43.0506697013818 27.207113729296715 5 10.27061402774756 40.83421195030654 37.806302612421135 11.088871409524765 6 26.46006779025632 43.34080112106072 19.46258705290898 10.736544035773976 7 25.645797421607842 33.96102845603289 24.408481582514685 15.984692539844584 8 23.047434159512214 38.86108926190596 21.79628358966635 16.29519298891548 9 25.423583202608107 16.14949312827882 22.73480891058841 35.69211475852466 10 13.735697908589344 28.926959616639795 36.715888361402904 20.621454113367957 11 30.845090065212904 24.72299856632024 27.929308988670027 16.50260237979683 12 21.548247165262175 28.17946403567591 32.523923591779905 17.74836520728201 13 26.235364735231965 23.77311462533499 28.322291569507325 21.669229069925716 14 19.386607519407693 24.733736921144178 29.371389298600683 26.508266260847446 15 21.738553150847252 33.62763333039517 24.213529468865307 20.420284049892274 16 20.977274071198018 29.86402823196536 28.68907238625042 20.469625310586206 17 18.65747326494067 31.29605765958752 29.18670750143647 20.859761574035335 18 18.854834930658605 29.82371776991822 31.811355699606153 19.510091599817024 19 21.955606134141103 29.031624632514962 29.201211654644954 19.811557578698977 20 21.619604303503433 29.992759064279202 29.308942499829854 19.07869413238751 21 21.89134157838658 28.216491222198048 28.038313278552263 21.85385392086311 22 21.39264571669564 30.32252809903893 28.4447960155931 19.84003016867233 23 20.56720734229922 30.536235085675777 29.40121791481737 19.495339657207634 24 21.54329858259845 29.826350458781103 29.17466260844728 19.45568835017316 25 20.5280516269542 29.739388313421312 30.240461643511594 19.492098416112892 26 19.389920601978925 30.263856717590297 30.76171221229933 19.584510468131448 27 19.871597466761283 31.136833273081884 28.804097991172046 20.187471268984787 28 19.772945350679493 29.407426416441655 29.774842121705753 21.044786111173096 29 20.476281859605745 29.13912678683798 29.18018556783848 21.204405785717793 30 20.46345874694983 28.941457901214047 29.574420843928273 21.020662507907854 31 21.832313868662006 27.994961069913483 29.625806998712374 20.54691806271214 32 19.423459488528657 30.42798152803207 29.65043173036907 20.4981272530702 33 19.661703421459293 30.693608403858274 29.892162386820715 19.752525787861714 34 20.273128932922745 29.38010443165082 31.15644664613737 19.190319989289062 35 20.312914908477467 30.543511975025716 29.11483216219895 20.028740954297866 36 19.732544840860275 29.212976652068395 30.23269826215515 20.821780244916177 37 21.153994204813106 28.460124896653987 28.162109028508436 22.22377187002447 38 20.115149013088157 30.656304743202078 29.29236914631289 19.93617709739687 39 20.807736165255985 29.659874723572898 28.312048539594624 21.220340571576486 40 21.185502712328095 29.38786849615856 30.20379837505774 19.222830416455608 41 21.67191436470869 28.071242242816307 30.029031559827107 20.227811832647895 42 20.10130762708082 30.49772392555898 29.253581470076316 20.147386977283883 43 19.163537976625477 30.599871691166214 29.80234860952275 20.43424172268556 44 19.17213832653676 29.60096397909147 30.11263158481956 21.114266109552208 45 19.757822027194536 29.95058480412995 29.870141462015905 20.421451706659617 46 20.803622930499134 28.336555873036772 29.379966997325646 21.479854199138448 47 21.603142778404443 29.137978549042316 28.866299146357655 20.392579526195583 48 19.73376653080898 30.040244075239798 28.85769083579815 21.36829855815308 49 20.843830261052734 28.147125831479404 29.829832621885227 21.17921128558263 50 18.973030990038918 29.930558034917347 29.686216930272412 21.410194044771323 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3.0 1 7.0 2 11.0 3 27.5 4 44.0 5 60.5 6 77.0 7 74.0 8 71.0 9 108.5 10 146.0 11 203.0 12 260.0 13 549.0 14 838.0 15 1118.5 16 1399.0 17 2065.5 18 2732.0 19 3024.0 20 3316.0 21 4403.5 22 5491.0 23 6829.5 24 8168.0 25 12256.5 26 16345.0 27 22309.0 28 28273.0 29 33541.0 30 38809.0 31 41952.5 32 45096.0 33 53905.5 34 62715.0 35 71700.0 36 80685.0 37 85092.0 38 89499.0 39 88893.0 40 88287.0 41 86428.0 42 84569.0 43 74896.5 44 65224.0 45 62283.0 46 59342.0 47 54857.5 48 50373.0 49 44346.5 50 38320.0 51 36101.0 52 33882.0 53 30096.5 54 26311.0 55 22985.0 56 19659.0 57 17484.0 58 15309.0 59 12399.5 60 9490.0 61 8055.5 62 6621.0 63 5609.0 64 4597.0 65 3847.0 66 3097.0 67 2759.5 68 2422.0 69 1979.5 70 1537.0 71 1359.0 72 1181.0 73 950.5 74 720.0 75 640.5 76 561.0 77 470.0 78 379.0 79 275.5 80 172.0 81 143.5 82 115.0 83 89.5 84 64.0 85 48.0 86 32.0 87 25.5 88 19.0 89 16.5 90 14.0 91 9.5 92 5.0 93 6.0 94 7.0 95 5.0 96 3.0 97 3.5 98 4.0 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009706625608756046 2 8.925632743683721E-4 3 1.1157040929604651E-4 4 0.0 5 0.0 6 1.1157040929604651E-4 7 0.0 8 0.0 9 0.0014504153208486047 10 0.0011157040929604652 11 0.0 12 4.4628163718418603E-4 13 1.1157040929604651E-4 14 1.1157040929604651E-4 15 0.004909098009026046 16 6.694224557762789E-4 17 0.0 18 5.578520464802326E-4 19 0.0 20 2.2314081859209302E-4 21 0.0 22 1.1157040929604651E-4 23 0.0010041336836644184 24 7.809928650723256E-4 25 0.0021198377766248836 26 0.005690090874098372 27 0.005690090874098372 28 0.0039049643253616277 29 0.0021198377766248836 30 0.003793393916065581 31 0.008144639878611394 32 0.002008267367328837 33 0.004462816371841861 34 0.0016735561394406976 35 0.0014504153208486047 36 0.0078099286507232555 37 0.003793393916065581 38 0.007252076604243023 39 0.0041281051439537204 40 0.0018966969580327905 41 0.0032355418695853484 42 0.0016735561394406976 43 0.0022314081859209304 44 0.0011157040929604652 45 0.0013388449115525579 46 4.4628163718418603E-4 47 0.002008267367328837 48 0.0015619857301446512 49 1.1157040929604651E-4 50 7.809928650723256E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 896295.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.62390557505559 #Duplication Level Percentage of deduplicated Percentage of total 1 63.053601281221894 20.570547343657868 2 15.175785786250259 9.901868050357985 3 7.117369712780637 6.96589192357548 4 4.0428165594121195 5.275698627661283 5 2.5129872114833716 4.099172874937788 6 1.6639584718330016 3.257089443953618 7 1.1807191909028596 2.6963769976269645 8 0.8664293058163204 2.2613046288330074 9 0.6500461462129594 1.9086339684132332 >10 3.2218087146691525 18.81849520704271 >50 0.29070225862958615 6.6941140095232 >100 0.2035257499191099 12.48204932511023 >500 0.017847114664041624 4.075698085108187 >1k 0.002402496204774834 0.9930595141984756 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCATAGGGTCTTCTCGTCTTATTATTATATTTCAGCCTCTTCACTGAAAG 1746 0.1948019346308972 No Hit GTATTAGAGGCACTGCCTGCCCAGTGACTAAAGTTTAACGGCCGCGGTAT 1566 0.1747192609576088 No Hit CCATTGGGATGTCCTGATCCAACATCGAGGTCGTAAACCCTAATTGTCGA 1206 0.13455391361103208 No Hit CTCTAATACTTGTAATGCTAGAGGTGATGTTTTTGGTAAACAGGCGGGGT 1155 0.1288638227369337 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 1106 0.12339687268142743 No Hit GCCTAAAGGAAAGATCCAAAAAGATAAAAGGAACTCGGCAAACAAGAACC 1066 0.11893405630958556 No Hit GTATTGGAATTAGTGAAATTGGAGTTCCTTGTGGAAGGAAGTGGGCAAGT 1024 0.11424809911915162 No Hit GATATATTTTGATCAACGGACCAAGTTACCCTAGGGATAACAGCGCAATC 994 0.11090098684027022 No Hit ACCTATAACTTCTCTGTTAACCCAACACCGGAATGCCTAAAGGAAAGATC 977 0.10900428988223744 No Hit CCTCTAGCATTACAAGTATTAGAGGCACTGCCTGCCCAGTGACTAAAGTT 968 0.10800015619857302 No Hit CTTCTACACCATTGGGATGTCCTGATCCAACATCGAGGTCGTAAACCCTA 963 0.10744230415209279 No Hit ATCGTAAATAGATAGAAACCGACCTGGATTGCTCCGGTCTGAACTCAGAT 925 0.10320262859884301 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 2.2314081859209302E-4 0.0 16 0.0 0.0 0.0 2.2314081859209302E-4 0.0 17 0.0 0.0 0.0 2.2314081859209302E-4 0.0 18 0.0 0.0 0.0 3.347112278881395E-4 0.0 19 0.0 0.0 0.0 3.347112278881395E-4 0.0 20 0.0 0.0 0.0 3.347112278881395E-4 0.0 21 0.0 0.0 0.0 3.347112278881395E-4 0.0 22 0.0 0.0 0.0 3.347112278881395E-4 0.0 23 0.0 0.0 0.0 7.809928650723255E-4 0.0 24 0.0 0.0 0.0 0.001115704092960465 0.0 25 0.0 0.0 0.0 0.001115704092960465 0.0 26 0.0 0.0 0.0 0.001338844911552558 0.0 27 0.0 0.0 0.0 0.001561985730144651 0.0 28 0.0 0.0 0.0 0.0027892602324011626 0.0 29 0.0 0.0 0.0 0.006359513329874651 0.0 30 0.0 0.0 0.0 0.014838864436374185 0.0 31 0.0 0.0 0.0 0.04072319939305697 0.0 32 0.0 0.0 0.0 0.06961993540073302 0.0 33 0.0 0.0 0.0 0.09818196018052092 0.0 34 0.0 0.0 0.0 0.13500019524821627 0.0 35 0.0 0.0 0.0 0.1732688456367602 0.0 36 0.0 0.0 0.0 0.24110365448875648 0.0 37 0.0 0.0 0.0 0.34151702285519836 0.0 38 0.0 0.0 0.0 0.47651721810341463 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGTGCG 20 7.853541E-4 44.00229 26 ATCCGGT 30 0.0057427716 29.334858 23 AGAACGT 30 0.005745904 29.331585 5 GCGATAT 30 0.005745904 29.331585 13 CTAGGTA 60 9.745372E-6 25.668001 23 GTATCAA 1390 0.0 25.63876 1 GGTATCA 535 0.0 24.671427 1 AATCGGT 50 0.0025783076 22.00237 30 CTGTAGG 1350 0.0 21.346876 1 TAGGACG 1365 0.0 21.273457 4 TAGGACC 435 0.0 21.240112 4 TTAGGAC 790 0.0 20.88483 3 GGACGTG 1340 0.0 20.849503 6 TATGCAC 65 4.932776E-4 20.306482 3 ATATCGT 65 4.932776E-4 20.306482 11 CTCTAGG 195 0.0 20.306482 1 TGTAGGA 1440 0.0 20.012697 2 ACCGGTA 55 0.004481374 20.00104 34 GACCGTT 55 0.004484269 19.998808 7 GACGTGA 665 0.0 19.848442 7 >>END_MODULE