##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064099_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2477050 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.362708059990716 32.0 32.0 32.0 32.0 32.0 2 31.428703498112675 32.0 32.0 32.0 32.0 32.0 3 31.502787186370885 32.0 32.0 32.0 32.0 32.0 4 31.576902767404775 32.0 32.0 32.0 32.0 32.0 5 31.530292081306392 32.0 32.0 32.0 32.0 32.0 6 35.12578712581498 36.0 36.0 36.0 36.0 36.0 7 35.145470620294304 36.0 36.0 36.0 36.0 36.0 8 35.08719283018106 36.0 36.0 36.0 36.0 36.0 9 35.201396822833615 36.0 36.0 36.0 36.0 36.0 10 35.06245412890333 36.0 36.0 36.0 36.0 36.0 11 35.199567227145195 36.0 36.0 36.0 36.0 36.0 12 35.11987888819362 36.0 36.0 36.0 36.0 36.0 13 35.148260228901314 36.0 36.0 36.0 36.0 36.0 14 35.09928140328213 36.0 36.0 36.0 36.0 36.0 15 35.073109545628874 36.0 36.0 36.0 36.0 36.0 16 35.08233180597889 36.0 36.0 36.0 36.0 36.0 17 35.05591005429846 36.0 36.0 36.0 36.0 36.0 18 35.048662723804526 36.0 36.0 36.0 36.0 36.0 19 35.05351930724047 36.0 36.0 36.0 36.0 36.0 20 35.042235320239804 36.0 36.0 36.0 36.0 36.0 21 35.037723098040004 36.0 36.0 36.0 36.0 36.0 22 35.02735350517753 36.0 36.0 36.0 36.0 36.0 23 34.97999031105549 36.0 36.0 36.0 36.0 36.0 24 34.954979915625444 36.0 36.0 36.0 36.0 36.0 25 34.92154296441331 36.0 36.0 36.0 36.0 36.0 26 34.86863729032518 36.0 36.0 36.0 32.0 36.0 27 34.86858036777618 36.0 36.0 36.0 32.0 36.0 28 34.841289033325936 36.0 36.0 36.0 32.0 36.0 29 34.81703114591954 36.0 36.0 36.0 32.0 36.0 30 34.80202256716659 36.0 36.0 36.0 32.0 36.0 31 34.781663268807655 36.0 36.0 36.0 32.0 36.0 32 34.75605458105407 36.0 36.0 36.0 32.0 36.0 33 34.74565148059183 36.0 36.0 36.0 32.0 36.0 34 34.727802426273186 36.0 36.0 36.0 32.0 36.0 35 34.69855432873781 36.0 36.0 36.0 32.0 36.0 36 34.667772552027614 36.0 36.0 36.0 32.0 36.0 37 34.65315637552734 36.0 36.0 36.0 32.0 36.0 38 34.630751498758606 36.0 36.0 36.0 32.0 36.0 39 34.61154478109041 36.0 36.0 36.0 32.0 36.0 40 34.59654992834218 36.0 36.0 36.0 32.0 36.0 41 34.57484386669627 36.0 36.0 36.0 32.0 36.0 42 34.5312807573525 36.0 36.0 36.0 32.0 36.0 43 34.518188167376515 36.0 36.0 36.0 32.0 36.0 44 34.45628348236814 36.0 36.0 36.0 32.0 36.0 45 34.437165983730644 36.0 36.0 36.0 32.0 36.0 46 34.4012543146081 36.0 36.0 36.0 32.0 36.0 47 34.373065137966535 36.0 36.0 36.0 32.0 36.0 48 34.32888597323429 36.0 36.0 36.0 32.0 36.0 49 34.300208716012996 36.0 36.0 36.0 32.0 36.0 50 33.74073837831291 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 7.0 18 0.0 19 9.0 20 26.0 21 81.0 22 219.0 23 620.0 24 1727.0 25 3832.0 26 8120.0 27 15291.0 28 25436.0 29 39681.0 30 58421.0 31 84658.0 32 123848.0 33 200646.0 34 420945.0 35 1493483.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.77325723643252 19.403902227110166 12.369662659144185 25.453177877313127 2 15.757166422154201 21.03136891723098 38.150605683077934 25.06085897753688 3 17.360431256487075 25.956453688089944 29.539398015616214 27.14371703980677 4 12.028663127510548 16.49013948043035 37.660765830322354 33.82043156173674 5 13.806786298217638 37.5027552935952 33.83403645465372 14.856421953533436 6 32.14858977298785 37.69010531891187 17.0773033061935 13.084001601906786 7 28.827390033374417 31.230130070200524 21.992275479633612 17.950204416791447 8 27.09207609538608 34.01022749247189 19.77292334548085 19.124773066661177 9 27.214042363017803 13.953062128308261 19.396419647972017 39.43647586070191 10 15.683159603071434 27.2904538518058 32.004949495765075 25.021437049357697 11 36.17629841949093 22.276538624573586 22.9260208716013 18.62114208433419 12 23.611542292092157 24.444469563960634 30.208994823271418 21.734993320675787 13 28.62854764433711 21.133849354327822 25.932981864175296 24.304621137159767 14 22.84878843590309 20.054088620074072 26.405524968046617 30.691597975976226 15 25.071126038125254 27.674619621541247 22.51066941037352 24.743584929959976 16 24.912132816909256 27.277582786509996 24.045007052789746 23.765277343791002 17 22.950646938899094 26.762842897801818 26.11428917462304 24.172220988676045 18 23.522230529615136 26.685718945646503 26.794195016317836 22.99785550842052 19 25.034759116496737 25.315698363535947 26.26251085970074 23.387031660266576 20 25.620288466080186 25.157153739978433 25.60442271055735 23.618135083384033 21 26.184856987141963 24.90393815223754 25.288548878706525 23.62265598191397 22 24.861205757821406 25.270806217723678 26.133203716682115 23.7347843077728 23 24.020295338515364 25.43328238505754 26.191652718465964 24.35476955796113 24 24.313514770463758 25.49020241110552 25.87324053970912 24.3230422787216 25 24.559518806365908 25.3538645631603 25.490117710608 24.596498919865788 26 24.19290372174295 25.916991534593187 25.923531957637437 23.966572786026425 27 24.223494154177587 25.847946038935003 25.859533117444933 24.069026689442477 28 23.84111227383421 25.874141684269002 26.276048227170257 24.008697814726535 29 24.1145640725854 25.204079820038338 26.062345476654556 24.619010630721704 30 24.183622674508033 25.68458212098836 26.054068937228823 24.07772626727478 31 24.89454321709401 25.356784682442658 25.325938977182254 24.42273312328108 32 23.979736434772008 25.746096623358167 25.700799125378794 24.573367816491036 33 23.927446902742403 25.439730116108052 26.103700689203553 24.529122291945995 34 24.304012718873096 24.941732752672742 26.649842205067603 24.104412323386555 35 24.65439462437393 25.138577238693593 25.969798438245622 24.237229698686857 36 24.694247508922658 25.642068119054922 25.357188998885675 24.306495373136737 37 24.65538068000142 25.559441180555332 25.49872100046186 24.286457138981387 38 24.19848049423907 25.751173462507744 25.937457859917686 24.1128881833355 39 24.685799552832105 24.69835545891231 25.894154115470734 24.72169087278485 40 24.839694354471785 25.279018420363126 25.863155519185206 24.018131705979886 41 24.52399119885343 25.556389915016453 26.12894890894043 23.790669977189687 42 24.444256044117974 26.110347416930598 25.903120514978834 23.542276023972597 43 24.139946822726543 25.453714536709356 25.910598232214966 24.49574040834914 44 24.097742114680294 25.024464999709327 26.17989122360525 24.69790166200513 45 24.695539695907076 25.311969369472664 25.494286247187127 24.498204687433134 46 24.739828293536824 25.422302139104357 25.313138620712483 24.52473094664633 47 23.94545140380398 25.633875713367548 26.032990120243007 24.387682762585467 48 24.382175520529287 25.950969681848758 25.50018207523785 24.16667272238411 49 24.214817945795723 25.507249185216047 25.842488424678358 24.435444444309876 50 24.26054111926699 25.91523503702442 25.562996414231005 24.26122742947759 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 28.0 1 37.5 2 47.0 3 121.0 4 195.0 5 269.0 6 343.0 7 340.5 8 338.0 9 486.5 10 635.0 11 918.5 12 1202.0 13 2430.0 14 3658.0 15 4868.0 16 6078.0 17 6295.0 18 6512.0 19 6508.5 20 6505.0 21 7681.5 22 8858.0 23 10736.5 24 12615.0 25 15760.5 26 18906.0 27 23528.5 28 28151.0 29 34212.5 30 40274.0 31 45873.5 32 51473.0 33 59162.0 34 66851.0 35 76677.0 36 86503.0 37 99700.5 38 112898.0 39 121946.5 40 130995.0 41 140682.0 42 150369.0 43 151150.5 44 151932.0 45 160301.5 46 168671.0 47 173895.5 48 179120.0 49 183954.0 50 188788.0 51 186631.0 52 184474.0 53 177364.5 54 170255.0 55 164951.5 56 159648.0 57 150460.0 58 141272.0 59 129190.5 60 117109.0 61 102113.0 62 87117.0 63 75464.0 64 63811.0 65 52464.0 66 41117.0 67 34412.0 68 27707.0 69 24403.5 70 21100.0 71 17508.0 72 13916.0 73 12461.5 74 11007.0 75 8796.0 76 6585.0 77 5527.5 78 4470.0 79 3381.0 80 2292.0 81 1836.5 82 1381.0 83 1138.0 84 895.0 85 654.0 86 413.0 87 301.0 88 189.0 89 154.0 90 119.0 91 97.0 92 75.0 93 66.0 94 57.0 95 55.5 96 54.0 97 41.0 98 28.0 99 21.0 100 14.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008397085242526392 2 4.8444722553036884E-4 3 3.6333541914777655E-4 4 0.0 5 0.0 6 8.074120425506146E-5 7 1.2111180638259221E-4 8 4.037060212753073E-5 9 0.0012514886659534526 10 0.001211118063825922 11 0.0 12 1.2111180638259221E-4 13 7.67041440423084E-4 14 1.6148240851012293E-4 15 0.00440039563190085 16 6.459296340404917E-4 17 0.0 18 2.4222361276518442E-4 19 8.074120425506146E-5 20 6.863002361680225E-4 21 0.0 22 8.074120425506146E-5 23 0.0011303768595708604 24 4.8444722553036884E-4 25 0.0017359358914838215 26 0.005894107910619487 27 0.006176702125512202 28 0.004279283825518258 29 0.003148906965947397 30 0.004077430814880604 31 0.00831634403827133 32 0.0037140953957328273 33 0.005369290082961587 34 0.004077430814880604 35 0.0037140953957328273 36 0.008477826446781453 37 0.004602248642538503 38 0.0077511556084859014 39 0.005167437072323934 40 0.0025433479340344362 41 0.004037060212753073 42 0.0022203831170141903 43 0.002099271310631598 44 0.0016955652893562907 45 0.0017763064936113524 46 0.0012918592680809834 47 0.002664459740417028 48 0.002099271310631598 49 5.248178276578995E-4 50 0.0014533416765911062 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2477050.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.387077786388666 #Duplication Level Percentage of deduplicated Percentage of total 1 83.03008024369582 50.96973994529848 2 10.556754925980108 12.960966716259653 3 2.7214514754772394 5.011858602510106 4 1.124584381256987 2.761397955583217 5 0.6324567562599163 1.9412336046527268 6 0.3895750372627747 1.4348923869651131 7 0.2653003021208945 1.1400207198133439 8 0.20050157629099224 0.9846564688054946 9 0.14624441013275621 0.807976528257963 >10 0.803403175219229 8.97000643149509 >50 0.0652783246575336 2.7674486235258935 >100 0.05781369575244834 7.18097081199653 >500 0.00549618948633257 2.2915625282843486 >1k 0.0010595064070020317 0.7772686765520288 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.6148240851012293E-4 2 0.0 0.0 0.0 0.0 1.6148240851012293E-4 3 0.0 0.0 0.0 0.0 1.6148240851012293E-4 4 0.0 0.0 0.0 4.037060212753073E-5 1.6148240851012293E-4 5 0.0 0.0 0.0 4.037060212753073E-5 1.6148240851012293E-4 6 0.0 0.0 0.0 4.037060212753073E-5 1.6148240851012293E-4 7 0.0 0.0 0.0 4.037060212753073E-5 1.6148240851012293E-4 8 0.0 0.0 0.0 4.037060212753073E-5 1.6148240851012293E-4 9 0.0 0.0 0.0 4.037060212753073E-5 1.6148240851012293E-4 10 0.0 0.0 0.0 8.074120425506146E-5 1.6148240851012293E-4 11 0.0 0.0 0.0 8.074120425506146E-5 1.6148240851012293E-4 12 0.0 0.0 0.0 8.074120425506146E-5 1.6148240851012293E-4 13 0.0 0.0 0.0 8.074120425506146E-5 2.825942148927151E-4 14 0.0 0.0 0.0 8.074120425506146E-5 2.825942148927151E-4 15 0.0 0.0 0.0 8.074120425506146E-5 3.2296481702024586E-4 16 0.0 0.0 0.0 8.074120425506146E-5 3.2296481702024586E-4 17 0.0 0.0 0.0 8.074120425506146E-5 3.2296481702024586E-4 18 0.0 0.0 0.0 8.074120425506146E-5 3.633354191477766E-4 19 0.0 0.0 0.0 8.074120425506146E-5 3.633354191477766E-4 20 0.0 0.0 0.0 8.074120425506146E-5 3.633354191477766E-4 21 0.0 0.0 0.0 1.211118063825922E-4 3.633354191477766E-4 22 0.0 0.0 0.0 2.0185301063765365E-4 3.633354191477766E-4 23 0.0 0.0 0.0 2.422236127651844E-4 3.633354191477766E-4 24 0.0 4.037060212753073E-5 0.0 5.248178276578995E-4 3.633354191477766E-4 25 0.0 4.037060212753073E-5 0.0 6.05559031912961E-4 3.633354191477766E-4 26 0.0 4.037060212753073E-5 0.0 7.266708382955532E-4 4.4407662340283804E-4 27 0.0 4.037060212753073E-5 0.0 8.881532468056761E-4 4.844472255303688E-4 28 0.0 4.037060212753073E-5 0.0 0.0017359358914838215 4.844472255303688E-4 29 0.0 4.037060212753073E-5 0.0 0.004158172019135665 4.844472255303688E-4 30 0.0 4.037060212753073E-5 0.0 0.009648573908479846 4.844472255303688E-4 31 0.0 4.037060212753073E-5 0.0 0.023051613814820047 4.844472255303688E-4 32 0.0 4.037060212753073E-5 0.0 0.03871540744030197 4.844472255303688E-4 33 0.0 4.037060212753073E-5 0.0 0.055832542742375 4.844472255303688E-4 34 0.0 4.037060212753073E-5 0.0 0.07508931995720716 5.248178276578995E-4 35 0.0 4.037060212753073E-5 0.0 0.09935205183585313 5.651884297854302E-4 36 0.0 4.037060212753073E-5 0.0 0.13140630992511254 5.651884297854302E-4 37 0.0 4.037060212753073E-5 0.0 0.17795361417815547 5.651884297854302E-4 38 0.0 4.037060212753073E-5 0.0 0.24581659635453462 5.651884297854302E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3935 0.0 26.947891 1 GGTATCA 1615 0.0 26.291008 1 ATCAACG 6045 0.0 17.322 3 TTTACGG 115 4.2798492E-6 17.215994 3 AACGCAG 6070 0.0 17.17783 6 TCAACGC 6160 0.0 16.962564 4 CAACGCA 6200 0.0 16.81765 5 TACCGTC 385 0.0 16.570084 7 TATCAAC 6440 0.0 16.566978 2 TAGGACG 465 0.0 16.08439 4 TCTATAC 260 0.0 16.075619 3 CTAACGT 110 5.6289733E-5 15.998701 3 GTATAGA 285 0.0 15.43859 1 ACGCAGA 7065 0.0 14.790023 7 CGCAGAG 7100 0.0 14.717114 8 CCCTTAT 630 0.0 14.66666 1 CGATTTA 555 0.0 14.6657715 18 GTCCTAA 530 0.0 14.5282955 1 CGCAATA 395 0.0 14.482175 36 AGAGTAC 7295 0.0 14.44463 11 >>END_MODULE