##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064098_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1570886 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.352502345809945 32.0 32.0 32.0 32.0 32.0 2 31.438942736774024 32.0 32.0 32.0 32.0 32.0 3 31.508080153492998 32.0 32.0 32.0 32.0 32.0 4 31.591253598287846 32.0 32.0 32.0 32.0 32.0 5 31.54256960721529 32.0 32.0 32.0 32.0 32.0 6 35.14246609874937 36.0 36.0 36.0 36.0 36.0 7 35.15814896816192 36.0 36.0 36.0 36.0 36.0 8 35.11036319631087 36.0 36.0 36.0 36.0 36.0 9 35.20430890592952 36.0 36.0 36.0 36.0 36.0 10 35.07256541849631 36.0 36.0 36.0 36.0 36.0 11 35.211659534810295 36.0 36.0 36.0 36.0 36.0 12 35.123847943135274 36.0 36.0 36.0 36.0 36.0 13 35.15839023328236 36.0 36.0 36.0 36.0 36.0 14 35.10748456603471 36.0 36.0 36.0 36.0 36.0 15 35.07984665978308 36.0 36.0 36.0 36.0 36.0 16 35.098215911275545 36.0 36.0 36.0 36.0 36.0 17 35.06583736821131 36.0 36.0 36.0 36.0 36.0 18 35.05555718237988 36.0 36.0 36.0 36.0 36.0 19 35.05837979331409 36.0 36.0 36.0 36.0 36.0 20 35.04599569924234 36.0 36.0 36.0 36.0 36.0 21 35.04898573161897 36.0 36.0 36.0 36.0 36.0 22 35.03177187905424 36.0 36.0 36.0 36.0 36.0 23 34.98364489848404 36.0 36.0 36.0 36.0 36.0 24 34.95308634744978 36.0 36.0 36.0 36.0 36.0 25 34.92527401733798 36.0 36.0 36.0 36.0 36.0 26 34.873815795671995 36.0 36.0 36.0 32.0 36.0 27 34.86589669778711 36.0 36.0 36.0 32.0 36.0 28 34.849302877484426 36.0 36.0 36.0 32.0 36.0 29 34.82453596250778 36.0 36.0 36.0 32.0 36.0 30 34.810687089960695 36.0 36.0 36.0 32.0 36.0 31 34.79920949069506 36.0 36.0 36.0 32.0 36.0 32 34.760821600039726 36.0 36.0 36.0 32.0 36.0 33 34.73424042228398 36.0 36.0 36.0 32.0 36.0 34 34.72933872986327 36.0 36.0 36.0 32.0 36.0 35 34.69199356286834 36.0 36.0 36.0 32.0 36.0 36 34.6739222324217 36.0 36.0 36.0 32.0 36.0 37 34.65644037823241 36.0 36.0 36.0 32.0 36.0 38 34.62369388994491 36.0 36.0 36.0 32.0 36.0 39 34.624671682095325 36.0 36.0 36.0 32.0 36.0 40 34.60407311542658 36.0 36.0 36.0 32.0 36.0 41 34.587594516724955 36.0 36.0 36.0 32.0 36.0 42 34.52372037181565 36.0 36.0 36.0 32.0 36.0 43 34.522833611095905 36.0 36.0 36.0 32.0 36.0 44 34.45927011890105 36.0 36.0 36.0 32.0 36.0 45 34.433685194215236 36.0 36.0 36.0 32.0 36.0 46 34.40762728804 36.0 36.0 36.0 32.0 36.0 47 34.38061132380071 36.0 36.0 36.0 32.0 36.0 48 34.33658012102724 36.0 36.0 36.0 32.0 36.0 49 34.3255424009126 36.0 36.0 36.0 32.0 36.0 50 33.73039100227515 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 3.0 18 2.0 19 7.0 20 10.0 21 35.0 22 157.0 23 458.0 24 1142.0 25 2564.0 26 5472.0 27 9969.0 28 16633.0 29 25581.0 30 36754.0 31 52330.0 32 76610.0 33 123699.0 34 264177.0 35 955283.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.58204356243518 18.15595919674399 11.767128842971891 26.494868397848936 2 15.92940240311928 20.682485875706213 37.100533142356966 26.287578578817538 3 17.84438159224028 24.6893940406689 29.19762859185387 28.268595775236953 4 12.117938539142878 16.261141801505648 36.6029107140811 35.018008945270374 5 14.044876585570181 37.228162960265735 33.75903789326533 14.967922560898753 6 33.75746873412516 36.27115212982261 16.96416408107038 13.007215054981852 7 29.91483786856589 30.834955560110664 21.17556589084122 18.074640680482222 8 27.91889417818989 33.01659063738553 19.627204010984883 19.437311173439703 9 27.657840777504966 13.896176070473004 18.374455954690106 40.071527197331925 10 15.396671402889606 26.964259341308523 32.22598658579439 25.413082670007487 11 36.94717503370709 21.013364432555896 23.015610298901386 19.023850234835628 12 24.527017908387887 23.76356242727025 29.225200587694573 22.48421907664729 13 29.463669020553485 19.57702608160919 25.41274714697586 25.54655775086146 14 23.543558913325235 19.6183168203381 25.564268271877488 31.273855994459172 15 25.047665792608125 27.395783001757668 22.42109759598888 25.13545360964533 16 25.70379834346467 25.849068254577563 23.800456944531977 24.646676457425794 17 24.073993911716062 25.84503267582753 25.29273289086541 24.788240521591 18 24.576877022355 25.186599349790782 26.249889393135945 23.986634234718267 19 25.57117448369901 24.987045527173837 25.445640231054323 23.996139758072832 20 25.721171750119836 24.46009595889186 25.132011909240738 24.686720381747566 21 26.694680581531692 24.301827121764404 24.56492705390461 24.43856524279929 22 25.79821298071659 24.475581901655374 24.990132944253045 24.736072173374993 23 24.45972682688341 24.245259957526773 25.493611191745728 25.801402023844084 24 24.861049132364744 24.90834749207291 25.33581517099662 24.894788204565724 25 24.958971362074386 24.445747345074718 25.48874688545212 25.10653440739878 26 24.71530647843281 25.140946211258893 25.68856107541832 24.45518623488998 27 25.242760476118022 24.936353560349048 24.850154731354408 24.97073123217852 28 24.601531042605 24.797606353349355 25.678799357025767 24.922063247019878 29 24.76510960066563 24.863910305257253 25.42042819155878 24.950551902518335 30 24.704979867267202 25.035888784555887 25.66982318208585 24.58930816609107 31 25.192596011522973 24.70245579411437 24.875618723241715 25.22932947112094 32 24.910158903356123 25.02035549381887 24.773479481216608 25.2960061216084 33 24.510408085571793 24.69012565587682 25.315030958786554 25.484435299764836 34 25.199145170192487 24.60774146809444 25.461361730896677 24.731751630816397 35 25.6089913962956 24.548727269254886 25.420174620504383 24.42210671394513 36 24.723272838625107 25.199217454358404 25.066989395653472 25.010520311363017 37 25.61628286719942 24.895453292497148 24.856938597390297 24.63132524291314 38 24.770702944207937 24.843915025601945 25.370660035561972 25.014721994628143 39 25.291743086559414 24.763673935283357 24.811674434386692 25.132908543770533 40 25.581103697559342 24.879189379996905 25.22830040099386 24.311406521449893 41 24.62876502860257 25.221442312956523 25.491043634034828 24.65874902440608 42 25.645032943947545 25.258299646688098 25.033898844574594 24.062768564789764 43 24.99420696539203 24.512302877674028 25.291943480353336 25.201546676580605 44 24.734875033659844 25.11765825536664 24.889630731642416 25.257835979331105 45 24.85071871458946 25.247826031600525 25.006429599073122 24.895025654736898 46 24.703300788672752 24.96264801539532 25.040757747154913 25.293293448777014 47 24.826892091561145 24.90302965099587 25.42720746402723 24.842870793415756 48 25.50662158695277 25.260003042944344 24.603159951287427 24.630215418815453 49 24.7823828457716 25.284267778910902 24.852343721154664 25.08100565416283 50 24.81446539679387 25.48836119694487 24.848459384823403 24.848714021437857 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 80.0 1 63.5 2 47.0 3 134.0 4 221.0 5 244.5 6 268.0 7 261.5 8 255.0 9 337.0 10 419.0 11 614.5 12 810.0 13 1467.5 14 2125.0 15 2808.5 16 3492.0 17 3676.5 18 3861.0 19 3960.0 20 4059.0 21 4648.0 22 5237.0 23 6043.5 24 6850.0 25 8259.5 26 9669.0 27 12231.0 28 14793.0 29 17282.5 30 19772.0 31 22539.0 32 25306.0 33 29286.0 34 33266.0 35 38591.0 36 43916.0 37 51299.0 38 58682.0 39 64311.5 40 69941.0 41 76535.5 42 83130.0 43 85599.0 44 88068.0 45 96845.0 46 105622.0 47 111087.5 48 116553.0 49 120145.0 50 123737.0 51 121302.5 52 118868.0 53 116926.0 54 114984.0 55 114219.0 56 113454.0 57 109494.5 58 105535.0 59 96054.0 60 86573.0 61 75572.5 62 64572.0 63 55735.0 64 46898.0 65 39622.5 66 32347.0 67 27402.5 68 22458.0 69 20007.0 70 17556.0 71 13670.0 72 9784.0 73 8342.0 74 6900.0 75 5276.5 76 3653.0 77 3298.0 78 2943.0 79 2364.0 80 1785.0 81 1448.5 82 1112.0 83 889.0 84 666.0 85 478.5 86 291.0 87 207.5 88 124.0 89 97.5 90 71.0 91 57.5 92 44.0 93 36.0 94 28.0 95 28.0 96 28.0 97 21.5 98 15.0 99 16.5 100 18.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00821192626326799 2 7.002417743871929E-4 3 3.182917156305423E-4 4 0.0 5 0.0 6 2.546333725044338E-4 7 0.0 8 0.0 9 9.548751468916268E-4 10 8.912168037655183E-4 11 0.0 12 1.273166862522169E-4 13 5.72925088134976E-4 14 1.273166862522169E-4 15 0.0033738921856837478 16 0.0010821918331438438 17 0.0 18 4.456084018827592E-4 19 0.0 20 3.182917156305423E-4 21 0.0 22 1.273166862522169E-4 23 8.912168037655183E-4 24 4.456084018827592E-4 25 0.0020370669800354704 26 0.0047107173913320255 27 0.006302175969484737 28 0.0038831589306926157 29 0.0029919421269270973 30 0.0038831589306926157 31 0.007066076086998037 32 0.003628525558188182 33 0.005601934195097543 34 0.0029919421269270973 35 0.003246575499431531 36 0.0073207094595024716 37 0.003628525558188182 38 0.006811442714493604 39 0.004392425675701484 40 0.00248267538191823 41 0.0030556004700532055 42 0.002291700352539904 43 0.0021643836662876875 44 0.0014641418919004944 45 0.0016551169212788198 46 0.0012095085193960604 47 0.0028646254406748803 48 0.00248267538191823 49 5.092667450088676E-4 50 0.0012731668625221692 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1570886.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.66072239410973 #Duplication Level Percentage of deduplicated Percentage of total 1 78.91114848337784 45.50073826500423 2 12.690558717322691 14.634935664513863 3 3.6612961736019334 6.33338946806032 4 1.5475909509795907 3.5694084881628183 5 0.8314653077795704 2.397144514610541 6 0.5097544616291733 1.7635686300695175 7 0.35097557655503736 1.4166253700796831 8 0.2416918526181585 1.1148901454986977 9 0.19769164109821788 1.0259138553300284 >10 0.9308521253867243 9.489228814365614 >50 0.06315197272591284 2.5328725361276563 >100 0.05548370415580205 6.535141682766661 >500 0.006448852008328217 2.4219320942937097 >1k 0.0018901807610617186 1.264210471116755 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 1.273166862522169E-4 5 0.0 0.0 0.0 0.0 1.273166862522169E-4 6 0.0 0.0 0.0 0.0 1.273166862522169E-4 7 0.0 0.0 0.0 0.0 1.273166862522169E-4 8 0.0 0.0 0.0 6.365834312610845E-5 1.273166862522169E-4 9 0.0 0.0 0.0 1.9097502937832534E-4 1.273166862522169E-4 10 0.0 0.0 0.0 1.9097502937832534E-4 1.273166862522169E-4 11 0.0 0.0 0.0 1.9097502937832534E-4 1.273166862522169E-4 12 0.0 0.0 0.0 1.9097502937832534E-4 2.546333725044338E-4 13 0.0 0.0 0.0 1.9097502937832534E-4 2.546333725044338E-4 14 0.0 0.0 0.0 1.9097502937832534E-4 2.546333725044338E-4 15 0.0 0.0 0.0 1.9097502937832534E-4 2.546333725044338E-4 16 0.0 0.0 0.0 1.9097502937832534E-4 2.546333725044338E-4 17 0.0 0.0 0.0 2.546333725044338E-4 2.546333725044338E-4 18 0.0 0.0 0.0 3.1829171563054224E-4 2.546333725044338E-4 19 0.0 0.0 0.0 3.819500587566507E-4 2.546333725044338E-4 20 0.0 0.0 0.0 3.819500587566507E-4 3.1829171563054224E-4 21 0.0 0.0 0.0 5.092667450088676E-4 3.819500587566507E-4 22 0.0 0.0 0.0 7.639001175133014E-4 6.365834312610845E-4 23 0.0 0.0 0.0 0.001273166862522169 7.002417743871929E-4 24 0.0 0.0 0.0 0.0022280420094137957 7.002417743871929E-4 25 0.0 0.0 0.0 0.002546333725044338 7.002417743871929E-4 26 0.0 0.0 0.0 0.003119258813179314 7.002417743871929E-4 27 0.0 0.0 0.0 0.00369218390131429 7.639001175133014E-4 28 0.0 0.0 0.0 0.0052836424794670015 7.639001175133014E-4 29 0.0 0.0 0.0 0.010058018213925135 7.639001175133014E-4 30 0.0 0.0 0.0 0.019861403055345835 7.639001175133014E-4 31 0.0 0.0 0.0 0.04023207285570054 7.639001175133014E-4 32 0.0 0.0 0.0 0.06467687661612619 7.639001175133014E-4 33 0.0 0.0 0.0 0.08632071327900306 7.639001175133014E-4 34 0.0 0.0 0.0 0.11031990863754594 8.912168037655183E-4 35 0.0 0.0 0.0 0.13845689629928587 8.912168037655183E-4 36 0.0 0.0 0.0 0.17569702702805934 8.912168037655183E-4 37 0.0 0.0 0.0 0.23407172767470077 8.912168037655183E-4 38 0.0 0.0 0.0 0.3165092820230112 8.912168037655183E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2500 0.0 23.58388 1 TTAACGG 135 1.1277734E-10 21.187101 35 TACGCTA 385 0.0 21.142078 9 TAGGACG 250 0.0 21.11855 4 TTAGACG 95 6.8735426E-7 20.840672 4 CGTCGTA 415 0.0 20.673937 10 ACGCTAT 400 0.0 20.349249 10 ATACGCT 415 0.0 19.613733 8 ATATACG 415 0.0 19.61311 6 TACCGTC 415 0.0 19.61311 7 GTCGTAG 430 0.0 19.441143 11 ACCGTCG 410 0.0 19.31636 8 ATACCGT 415 0.0 19.083025 6 AACGCAG 3175 0.0 18.43023 6 TAATACG 60 0.0074160052 18.332073 4 CGATTAA 85 1.4315824E-4 18.11698 41 CGCTATT 455 0.0 17.88945 11 TAACGGC 150 9.591531E-9 17.601593 36 TATACGC 465 0.0 17.504175 7 TAAACGC 455 0.0 17.408167 28 >>END_MODULE