##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064097_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 899945 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.277421397974322 32.0 32.0 32.0 32.0 32.0 2 31.416488785425777 32.0 32.0 32.0 32.0 32.0 3 31.486091927840036 32.0 32.0 32.0 32.0 32.0 4 31.57533515937085 32.0 32.0 32.0 32.0 32.0 5 31.517059375850746 32.0 32.0 32.0 32.0 32.0 6 35.09510025612676 36.0 36.0 36.0 36.0 36.0 7 35.11441810332854 36.0 36.0 36.0 36.0 36.0 8 35.07172438315675 36.0 36.0 36.0 36.0 36.0 9 35.178647584019025 36.0 36.0 36.0 36.0 36.0 10 35.03008072715555 36.0 36.0 36.0 36.0 36.0 11 35.18630027390563 36.0 36.0 36.0 36.0 36.0 12 35.080708265505116 36.0 36.0 36.0 36.0 36.0 13 35.12507653245476 36.0 36.0 36.0 36.0 36.0 14 35.06821639100167 36.0 36.0 36.0 36.0 36.0 15 35.04135141591986 36.0 36.0 36.0 36.0 36.0 16 35.0485551894838 36.0 36.0 36.0 36.0 36.0 17 35.01088622082461 36.0 36.0 36.0 36.0 36.0 18 35.0000133341482 36.0 36.0 36.0 36.0 36.0 19 35.00242459261399 36.0 36.0 36.0 36.0 36.0 20 34.99915994866353 36.0 36.0 36.0 36.0 36.0 21 34.99119835101034 36.0 36.0 36.0 36.0 36.0 22 34.97963097744862 36.0 36.0 36.0 36.0 36.0 23 34.9326236603348 36.0 36.0 36.0 36.0 36.0 24 34.90196734244871 36.0 36.0 36.0 32.0 36.0 25 34.87272888898766 36.0 36.0 36.0 32.0 36.0 26 34.81439199062165 36.0 36.0 36.0 32.0 36.0 27 34.81301412864119 36.0 36.0 36.0 32.0 36.0 28 34.796577568629196 36.0 36.0 36.0 32.0 36.0 29 34.75945196650906 36.0 36.0 36.0 32.0 36.0 30 34.74083305090867 36.0 36.0 36.0 32.0 36.0 31 34.7218930045725 36.0 36.0 36.0 32.0 36.0 32 34.685406330386854 36.0 36.0 36.0 32.0 36.0 33 34.64848185166871 36.0 36.0 36.0 32.0 36.0 34 34.6260893721283 36.0 36.0 36.0 32.0 36.0 35 34.58382456705687 36.0 36.0 36.0 32.0 36.0 36 34.55560173121691 36.0 36.0 36.0 32.0 36.0 37 34.54486107484346 36.0 36.0 36.0 32.0 36.0 38 34.49265010639539 36.0 36.0 36.0 32.0 36.0 39 34.49063109412242 36.0 36.0 36.0 32.0 36.0 40 34.456138986271384 36.0 36.0 36.0 32.0 36.0 41 34.43608220502364 36.0 36.0 36.0 32.0 36.0 42 34.352365977920876 36.0 36.0 36.0 32.0 36.0 43 34.34499441632544 36.0 36.0 36.0 32.0 36.0 44 34.26214490885554 36.0 36.0 36.0 32.0 36.0 45 34.20402357921873 36.0 36.0 36.0 32.0 36.0 46 34.19455966753524 36.0 36.0 36.0 32.0 36.0 47 34.140373022795835 36.0 36.0 36.0 32.0 36.0 48 34.08424292595659 36.0 36.0 36.0 32.0 36.0 49 34.03999911105679 36.0 36.0 36.0 32.0 36.0 50 33.46008922767503 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 4.0 20 11.0 21 43.0 22 101.0 23 278.0 24 719.0 25 1680.0 26 3506.0 27 6566.0 28 10825.0 29 16406.0 30 23576.0 31 33238.0 32 47662.0 33 75016.0 34 155424.0 35 524888.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.004929677637314 18.330710691488417 12.11427161679202 25.55008801408225 2 15.617391845447305 21.077428581270507 37.4108689588961 25.894310614386086 3 17.59506189301509 25.425695046336422 29.254616974464966 27.724626086183523 4 11.734606003700227 16.44211590708321 36.807360449805266 35.0159176394113 5 13.681613876403558 37.761085399663315 33.5128257837979 15.04447494013523 6 33.11050465362289 36.777510600659596 17.132399349292847 12.979585396424667 7 29.462199272620598 31.290759525881086 21.18200819385228 18.06503300764604 8 28.149164671174347 32.897010372856116 19.547083432876452 19.40674152309308 9 27.7104149628418 13.72097571382854 18.765445542794154 39.803163780535506 10 15.665856981258708 27.094977654016166 31.830192746611434 25.40897261811369 11 36.65768463628333 21.335414942024236 22.991627266110708 19.01527315558173 12 24.725177649745262 24.16803249087444 29.31245798354344 21.794331875836857 13 29.463232074955943 19.866613626211464 25.63087398965711 25.03928030917548 14 23.625443777119713 20.157342948735756 25.833800954502774 30.383412319641756 15 24.863208239064438 27.68605235201821 22.953679709481413 24.49705969943594 16 25.164900615154856 26.07007609430004 24.347064680155032 24.417958610390073 17 23.46276716910478 26.27549461355972 25.67123546438949 24.590502752946016 18 24.29131622780554 25.125591287448206 27.134940768470894 23.448151716275365 19 25.42224849546194 24.820655507453797 26.223631692638655 23.53346430444561 20 25.781385425695046 24.16894459630642 25.721048069871326 24.32862190812721 21 27.104323041963674 24.098694920245126 25.046419503414096 23.7505625343771 22 25.761685436332222 24.47549572473873 25.61556539566307 24.147253443265978 23 24.12888443426103 24.386568852520952 26.260475721660825 25.224070991557195 24 24.50530035335689 25.110451807898304 26.07640509367291 24.307842745071895 25 24.487990799335506 24.58144199303283 26.15266658147533 24.77790062615633 26 24.274922658416898 25.573061126520162 26.39225961880378 23.75975659625916 27 24.81556345517239 25.108817283640573 25.546531126132482 24.529088135054554 28 24.042852983729556 25.029613940887685 26.469751554037384 24.457781521345375 29 24.12921004967053 24.978609447401464 26.30904625915349 24.583134243774516 30 24.01188109570105 25.256884801598368 26.478775264829977 24.252458837870602 31 24.792134794001747 25.093736595166817 25.25965092425283 24.85447768657861 32 24.30633493716178 25.349860544709035 25.32774771371107 25.016056804418124 33 24.006680653219426 24.97588653112749 25.846971703899936 25.170461111753152 34 24.865127349784373 24.921798865014004 26.051228827355228 24.161844957846395 35 25.29877489790816 25.005083756979747 25.88282356863072 23.813317776481373 36 24.239013028345877 25.562961448364458 25.495397184526002 24.702628338763663 37 25.100259468949844 25.49551902124089 25.263274864848345 24.140946644960913 38 24.389989120541948 25.295351170903064 25.787427169307257 24.527232539247727 39 24.938188194584118 25.141875456296138 25.25333117015165 24.666605178968094 40 25.264410629318412 25.385976180263707 25.573547158321908 23.776066032095972 41 24.19820828916284 25.806236540500176 25.966806012076603 24.028749158260382 42 25.431281148082917 25.966875385444503 25.345386055659574 23.256457410813002 43 24.654669503908615 24.968914421597116 25.674076461077743 24.702339613416523 44 24.327922189763015 25.62924128796255 25.15876181893541 24.884074703339028 45 24.37692860722473 25.869255292314907 25.204208739056178 24.54960736140419 46 24.239275856398038 25.46170155078384 25.206015565620515 25.09300702719761 47 24.650055726618433 25.314219232850593 25.632577681128176 24.403147359402798 48 25.284909149095046 25.90017512356434 24.531966717633257 24.28294900970736 49 24.371597693626583 26.15293669251651 24.841628506757665 24.633837107099243 50 24.540189524588417 26.296869999644418 24.642307897450486 24.520632578316683 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 13.0 1 14.5 2 16.0 3 57.0 4 98.0 5 125.0 6 152.0 7 167.0 8 182.0 9 253.0 10 324.0 11 495.5 12 667.0 13 1212.5 14 1758.0 15 2516.5 16 3275.0 17 3676.0 18 4077.0 19 4236.0 20 4395.0 21 4647.0 22 4899.0 23 5427.5 24 5956.0 25 6099.0 26 6242.0 27 7725.0 28 9208.0 29 11065.0 30 12922.0 31 14816.0 32 16710.0 33 19405.5 34 22101.0 35 25327.0 36 28553.0 37 32772.0 38 36991.0 39 39386.0 40 41781.0 41 45290.0 42 48799.0 43 49236.5 44 49674.0 45 54139.5 46 58605.0 47 62053.0 48 65501.0 49 67286.5 50 69072.0 51 65895.0 52 62718.0 53 61203.0 54 59688.0 55 59920.0 56 60152.0 57 58791.5 58 57431.0 59 51896.0 60 46361.0 61 40551.0 62 34741.0 63 30452.0 64 26163.0 65 22118.0 66 18073.0 67 15925.0 68 13777.0 69 12482.5 70 11188.0 71 8710.0 72 6232.0 73 5289.5 74 4347.0 75 3372.5 76 2398.0 77 2137.5 78 1877.0 79 1543.0 80 1209.0 81 959.0 82 709.0 83 565.5 84 422.0 85 328.0 86 234.0 87 167.0 88 100.0 89 75.5 90 51.0 91 44.0 92 37.0 93 28.0 94 19.0 95 19.0 96 19.0 97 16.0 98 13.0 99 14.0 100 15.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009889493246809527 2 6.667074098972715E-4 3 5.555895082477262E-4 4 0.0 5 0.0 6 1.1111790164954526E-4 7 2.222358032990905E-4 8 0.0 9 0.0010000611148459073 10 7.778253115468168E-4 11 0.0 12 0.0 13 3.3335370494863575E-4 14 0.0 15 0.004111362361033174 16 0.0010000611148459073 17 0.0 18 2.222358032990905E-4 19 1.1111790164954526E-4 20 5.555895082477262E-4 21 0.0 22 0.0 23 7.778253115468168E-4 24 5.555895082477262E-4 25 0.0011111790164954525 26 0.004555833967631355 27 0.004666951869280901 28 0.0034446549511359024 29 0.0016667685247431787 30 0.003111301246187267 31 0.009222785836912255 32 0.0016667685247431787 33 0.0036668907544349936 34 0.0024445938362899957 35 0.002222358032990905 36 0.006778192000622261 37 0.0033335370494863574 38 0.009333903738561801 39 0.004000244459383629 40 0.00211124013134136 41 0.0025557117379395406 42 0.0011111790164954525 43 0.0011111790164954525 44 0.001333414819794543 45 8.88943213196362E-4 46 0.0014445327214440882 47 0.001777886426392724 48 0.0010000611148459073 49 4.44471606598181E-4 50 0.0010000611148459073 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 899945.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.19173091865992 #Duplication Level Percentage of deduplicated Percentage of total 1 79.1804885958278 46.8683017497226 2 13.26363769551808 15.701953469514013 3 3.8267793916683868 6.7954108811012475 4 1.4649775835356946 3.4685823570605394 5 0.673938533022948 1.9945794151205374 6 0.3768386192845721 1.3383438091471032 7 0.2302265832768103 0.9539256977350385 8 0.15278843366390368 0.7235049482333846 9 0.10984286329911103 0.5851610286962513 >10 0.564281526347612 6.411210281946237 >50 0.06837587212153536 2.8023132462754266 >100 0.07989178487143403 9.067477507765979 >500 0.007365909164912296 2.924000996496331 >1k 5.666083973009459E-4 0.3652346111853762 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1136 0.1262299362738834 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1089 0.12100739489635479 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1042 0.11578485351882616 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 949 0.10545088866541844 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 934 0.10378412014067527 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 1.1111790164954526E-4 0.0 1.1111790164954526E-4 0.0 6 0.0 1.1111790164954526E-4 0.0 1.1111790164954526E-4 1.1111790164954526E-4 7 0.0 1.1111790164954526E-4 0.0 1.1111790164954526E-4 1.1111790164954526E-4 8 0.0 1.1111790164954526E-4 0.0 1.1111790164954526E-4 1.1111790164954526E-4 9 0.0 1.1111790164954526E-4 0.0 1.1111790164954526E-4 1.1111790164954526E-4 10 0.0 1.1111790164954526E-4 0.0 1.1111790164954526E-4 1.1111790164954526E-4 11 0.0 1.1111790164954526E-4 0.0 1.1111790164954526E-4 1.1111790164954526E-4 12 0.0 1.1111790164954526E-4 0.0 1.1111790164954526E-4 3.3335370494863575E-4 13 0.0 1.1111790164954526E-4 0.0 2.222358032990905E-4 3.3335370494863575E-4 14 0.0 1.1111790164954526E-4 0.0 2.222358032990905E-4 3.3335370494863575E-4 15 0.0 2.222358032990905E-4 0.0 2.222358032990905E-4 3.3335370494863575E-4 16 0.0 2.222358032990905E-4 0.0 2.222358032990905E-4 3.3335370494863575E-4 17 0.0 2.222358032990905E-4 0.0 2.222358032990905E-4 3.3335370494863575E-4 18 0.0 3.3335370494863575E-4 0.0 3.3335370494863575E-4 3.3335370494863575E-4 19 0.0 3.3335370494863575E-4 0.0 3.3335370494863575E-4 3.3335370494863575E-4 20 0.0 4.44471606598181E-4 0.0 4.44471606598181E-4 3.3335370494863575E-4 21 0.0 4.44471606598181E-4 0.0 5.555895082477262E-4 3.3335370494863575E-4 22 0.0 4.44471606598181E-4 0.0 0.0010000611148459073 3.3335370494863575E-4 23 0.0 4.44471606598181E-4 0.0 0.001333414819794543 3.3335370494863575E-4 24 0.0 4.44471606598181E-4 0.0 0.0021112401313413596 3.3335370494863575E-4 25 0.0 4.44471606598181E-4 0.0 0.0023334759346404503 3.3335370494863575E-4 26 0.0 4.44471606598181E-4 0.0 0.003111301246187267 3.3335370494863575E-4 27 0.0 4.44471606598181E-4 0.0 0.003666890754434993 3.3335370494863575E-4 28 0.0 4.44471606598181E-4 0.0 0.006111484590724988 3.3335370494863575E-4 29 0.0 4.44471606598181E-4 0.0 0.008778314230314074 3.3335370494863575E-4 30 0.0 4.44471606598181E-4 0.0 0.017223274755679512 3.3335370494863575E-4 31 0.0 4.44471606598181E-4 0.0 0.034446549511359024 3.3335370494863575E-4 32 0.0 4.44471606598181E-4 0.0 0.05255876748023491 3.3335370494863575E-4 33 0.0 4.44471606598181E-4 0.0 0.0665596230880776 3.3335370494863575E-4 34 0.0 4.44471606598181E-4 0.0 0.08411625154870575 4.44471606598181E-4 35 0.0 4.44471606598181E-4 0.0 0.10433970964892299 4.44471606598181E-4 36 0.0 4.44471606598181E-4 0.0 0.13323036407780475 4.44471606598181E-4 37 0.0 4.44471606598181E-4 0.0 0.1763441099178283 4.44471606598181E-4 38 0.0 4.44471606598181E-4 0.0 0.23834789903827455 4.44471606598181E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCTATCG 25 0.0023519788 35.20151 13 CTAGGAC 130 1.6243575E-9 20.306307 3 GAACGCT 135 2.590241E-9 19.55857 33 ACGCTCC 135 2.59206E-9 19.557482 35 ACCGAGT 80 8.990027E-5 19.248688 8 TAGGACG 300 0.0 19.065367 4 GTGTTAC 105 1.7890106E-6 18.860048 1 CGGACCG 70 8.1218063E-4 18.856907 21 CGAGTGG 95 1.5957796E-5 18.527113 10 TATACTG 120 3.1620038E-7 18.332083 5 ACGCTAT 260 0.0 17.769993 10 GGCGTTA 260 0.0 17.768019 42 GACGTGA 200 3.6379788E-12 17.598799 7 TACGCTA 265 0.0 17.433743 9 TTATACT 165 1.6589183E-9 17.332151 4 AGCGTTC 90 2.2157334E-4 17.109945 8 GCATTCG 350 0.0 16.971212 22 GTATCAA 2810 0.0 16.913637 1 TTAGGAC 300 0.0 16.865517 3 TTGCGCG 145 1.2491364E-7 16.688517 18 >>END_MODULE