##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064096_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1795143 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.330681176931307 32.0 32.0 32.0 32.0 32.0 2 31.389160640684334 32.0 32.0 32.0 32.0 32.0 3 31.475510864594074 32.0 32.0 32.0 32.0 32.0 4 31.56375118862397 32.0 32.0 32.0 32.0 32.0 5 31.51221824668007 32.0 32.0 32.0 32.0 32.0 6 35.09639454906935 36.0 36.0 36.0 36.0 36.0 7 35.121039382377894 36.0 36.0 36.0 36.0 36.0 8 35.06371581539744 36.0 36.0 36.0 36.0 36.0 9 35.17528185776843 36.0 36.0 36.0 36.0 36.0 10 35.03437999089766 36.0 36.0 36.0 36.0 36.0 11 35.17921524914728 36.0 36.0 36.0 36.0 36.0 12 35.08915390027424 36.0 36.0 36.0 36.0 36.0 13 35.13429960732933 36.0 36.0 36.0 36.0 36.0 14 35.0714333064274 36.0 36.0 36.0 36.0 36.0 15 35.04655450847091 36.0 36.0 36.0 36.0 36.0 16 35.06185468232893 36.0 36.0 36.0 36.0 36.0 17 35.028842270504356 36.0 36.0 36.0 36.0 36.0 18 35.02907846338704 36.0 36.0 36.0 36.0 36.0 19 35.02193697103796 36.0 36.0 36.0 36.0 36.0 20 35.011107193131686 36.0 36.0 36.0 36.0 36.0 21 34.99926858194584 36.0 36.0 36.0 36.0 36.0 22 34.9812466193501 36.0 36.0 36.0 36.0 36.0 23 34.9371671226192 36.0 36.0 36.0 36.0 36.0 24 34.91169004363441 36.0 36.0 36.0 36.0 36.0 25 34.88005579499795 36.0 36.0 36.0 32.0 36.0 26 34.82731904923452 36.0 36.0 36.0 32.0 36.0 27 34.80569458811917 36.0 36.0 36.0 32.0 36.0 28 34.783027313144416 36.0 36.0 36.0 32.0 36.0 29 34.7464519539669 36.0 36.0 36.0 32.0 36.0 30 34.72157594130384 36.0 36.0 36.0 32.0 36.0 31 34.719772742338634 36.0 36.0 36.0 32.0 36.0 32 34.68275842091688 36.0 36.0 36.0 32.0 36.0 33 34.671508063703 36.0 36.0 36.0 32.0 36.0 34 34.66300010639821 36.0 36.0 36.0 32.0 36.0 35 34.628802830749414 36.0 36.0 36.0 32.0 36.0 36 34.59534532903507 36.0 36.0 36.0 32.0 36.0 37 34.56919810845153 36.0 36.0 36.0 32.0 36.0 38 34.52762704698177 36.0 36.0 36.0 32.0 36.0 39 34.49009076157164 36.0 36.0 36.0 32.0 36.0 40 34.493992400605414 36.0 36.0 36.0 32.0 36.0 41 34.49256465919428 36.0 36.0 36.0 32.0 36.0 42 34.430011982332324 36.0 36.0 36.0 32.0 36.0 43 34.42368435272287 36.0 36.0 36.0 32.0 36.0 44 34.34797060735551 36.0 36.0 36.0 32.0 36.0 45 34.32127468396668 36.0 36.0 36.0 32.0 36.0 46 34.27007374899938 36.0 36.0 36.0 32.0 36.0 47 34.260101841468895 36.0 36.0 36.0 32.0 36.0 48 34.208864697687034 36.0 36.0 36.0 32.0 36.0 49 34.19094411977208 36.0 36.0 36.0 32.0 36.0 50 33.609089080925585 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 3.0 19 5.0 20 15.0 21 50.0 22 164.0 23 522.0 24 1328.0 25 3036.0 26 6488.0 27 11894.0 28 19872.0 29 30776.0 30 44844.0 31 64453.0 32 93830.0 33 153323.0 34 317618.0 35 1046921.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.513632917111664 18.102717780983056 11.962849249313495 26.42080005259179 2 15.345612467495426 20.05378991628471 38.52223680487006 26.078360811349803 3 18.249845554619075 24.197928510032405 29.024980321792317 28.52724561355621 4 11.916376578356152 16.22879068687007 36.32830365046127 35.5265290843125 5 13.74726136023704 37.52358447210055 33.97734887972713 14.75180528793528 6 34.38454138142909 36.321603706895445 16.50488735982299 12.788967551852473 7 30.049210591696923 30.493910788115926 20.710172231500348 18.7467063886868 8 27.528057653345723 35.04567602692376 18.767975587460164 18.658290732270356 9 27.275426518872898 13.726259167941423 18.2235780011743 40.774736312011385 10 15.505339446168245 27.503022065254328 32.158228094901204 24.833410393676225 11 37.253466715465 20.53602414960814 23.3374165734986 18.873092561428255 12 24.95764956624577 23.11272485002571 29.899155553797723 22.030470029930797 13 30.10904472365588 19.908140613380052 25.211195815356508 24.771618847607563 14 22.918850807013165 20.146139182614373 25.371642737215744 31.563367273156718 15 24.55571345725429 29.07615250444412 21.90066231437343 24.46747172392816 16 24.880621858176763 25.917702057114333 25.049745534600167 24.151930550108737 17 23.49383865240819 26.65096875290715 25.73249039213032 24.122702202554336 18 24.044446722201858 25.371419913120885 27.507300274407875 23.076833090269382 19 25.864527708671513 24.56502048305928 25.226082393481963 24.34436941478724 20 26.045535344734905 24.990738847762255 25.085105114774226 23.878620692728617 21 26.258966555867698 24.3519875575372 24.497101345129607 24.8919445414655 22 25.83994701257783 25.209523698112076 24.954892172935526 23.995637116374574 23 24.19423662910207 25.15422281394662 25.78888437049127 24.862656186460033 24 25.282192946833582 24.928180968917694 25.673917923813054 24.115708160435666 25 24.794386546607573 25.02852183368651 25.833929395092014 24.343162224613895 26 23.906095670286415 26.073320071017086 26.25325824582006 23.767326012876442 27 24.576305178374657 25.558733444677063 25.495058054351933 24.36990332259635 28 23.98302695921412 25.668353869071165 25.540337433053196 24.80828173866152 29 24.389143346729046 24.925324577656312 25.286306850529943 25.399225225084702 30 24.122893755650864 25.23426545572646 25.867552347278313 24.775288441344365 31 25.173785783604245 24.847662373692636 25.106822965238386 24.871728877464726 32 24.506529745255538 25.582295736209765 25.0960813729428 24.8150931455919 33 23.998954917735983 25.411654338484098 25.963609299672324 24.6257814441076 34 24.710713139740093 25.29396625487994 26.06673485213113 23.92858575324884 35 24.768104711773557 25.441605170522628 25.869436727445116 23.9208533902587 36 23.939425677068417 25.66436659688092 25.804978000220615 24.591229725830047 37 24.796486413765557 25.40403289196246 25.028731165975614 24.770749528296367 38 24.60196800145291 25.72078624237404 25.193159515303183 24.484086240869875 39 25.421709164403065 24.633441703861006 25.047240339684784 24.897608792051145 40 25.860606172020407 25.016809639123373 25.456060689621363 23.666523499234863 41 24.756488396954136 24.922441171440525 26.314015628194483 24.007054803410863 42 25.316791348046273 25.982600499468276 25.462242125687073 23.238366026798374 43 24.26393541159621 25.37689659917075 25.889842523150254 24.469325466082786 44 23.83451467635806 25.78618174039569 25.38626685948443 24.99303672376182 45 24.12475746895352 25.829591266598374 25.33881928394084 24.70683198050727 46 24.300244105427694 25.041919063062984 25.31320921205531 25.344627619454013 47 25.110870581262105 25.01655886460503 25.494468030110674 24.37810252402219 48 24.796962868674154 25.66509666511616 24.708556276338843 24.829384189870844 49 24.821726698296565 25.40903563349204 24.98037754221544 24.788860125995953 50 24.331186773029103 26.413275992691297 24.580195195864345 24.67534203841526 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 10.0 1 15.0 2 20.0 3 75.0 4 130.0 5 153.5 6 177.0 7 181.0 8 185.0 9 233.0 10 281.0 11 437.5 12 594.0 13 1145.0 14 1696.0 15 2331.5 16 2967.0 17 3293.0 18 3619.0 19 3771.5 20 3924.0 21 4548.0 22 5172.0 23 6112.0 24 7052.0 25 9073.0 26 11094.0 27 15438.5 28 19783.0 29 23716.0 30 27649.0 31 32378.0 32 37107.0 33 45263.5 34 53420.0 35 62864.0 36 72308.0 37 78224.0 38 84140.0 39 84943.5 40 85747.0 41 89022.0 42 92297.0 43 92607.0 44 92917.0 45 100836.5 46 108756.0 47 114660.5 48 120565.0 49 126000.0 50 131435.0 51 130441.5 52 129448.0 53 128001.5 54 126555.0 55 125776.5 56 124998.0 57 121402.0 58 117806.0 59 108084.5 60 98363.0 61 85866.5 62 73370.0 63 62944.0 64 52518.0 65 44178.5 66 35839.0 67 30847.5 68 25856.0 69 22516.5 70 19177.0 71 14599.0 72 10021.0 73 8473.0 74 6925.0 75 5470.0 76 4015.0 77 3443.0 78 2871.0 79 2349.0 80 1827.0 81 1475.0 82 1123.0 83 927.0 84 731.0 85 516.0 86 301.0 87 223.0 88 145.0 89 109.0 90 73.0 91 59.0 92 45.0 93 38.5 94 32.0 95 31.0 96 30.0 97 23.5 98 17.0 99 14.5 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01036129155170368 2 6.127645541330134E-4 3 5.570586855754667E-4 4 0.0 5 0.0 6 1.1141173711509334E-4 7 5.570586855754667E-5 8 0.0 9 0.0016154701881688533 10 7.241762912481068E-4 11 0.0 12 1.1141173711509334E-4 13 4.4564694846037335E-4 14 2.7852934278773333E-4 15 0.004122234273258453 16 3.8994107990282664E-4 17 0.0 18 2.7852934278773333E-4 19 5.570586855754667E-5 20 5.570586855754667E-4 21 0.0 22 0.0 23 7.241762912481068E-4 24 3.3423521134528004E-4 25 0.00150405845105376 26 0.004567881221718827 27 0.005626292724312213 28 0.0033980579820103466 29 0.0022839406108594133 30 0.0035651755876829868 31 0.006517586621232961 32 0.0027852934278773333 33 0.00384370493047072 34 0.0021725288737443203 35 0.0024510582165320535 36 0.006963233569693333 37 0.00300811690210752 38 0.0069075277011357876 39 0.0037322931933556273 40 0.00233964647941696 41 0.00300811690210752 42 0.0018939995309565868 43 0.0012255291082660267 44 6.127645541330134E-4 45 6.684704226905601E-4 46 9.469997654782934E-4 47 0.0017825877938414934 48 0.0015597643196113065 49 3.3423521134528004E-4 50 0.0012812349768235734 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1795143.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.42878300111974 #Duplication Level Percentage of deduplicated Percentage of total 1 72.21634960023944 36.41782623123475 2 14.929636294935353 15.057667780058722 3 5.446431278250372 8.239707031841974 4 2.552382765201096 5.148542264084961 5 1.3413927820946125 3.382240276375876 6 0.8343094882173047 2.524392728225143 7 0.5508004364912669 1.9443336982118082 8 0.38220053437566487 1.5419126248753927 9 0.27124248060495587 1.2310585375601475 >10 1.3197245569250293 11.740163144136131 >50 0.08330902971181696 2.9341068689956598 >100 0.06455478296375235 6.647821703195636 >500 0.006110555788637524 2.2477988040515062 >1k 0.0015554142007440973 0.9424283071523027 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.2282347423018667E-4 2 0.0 0.0 0.0 0.0 2.2282347423018667E-4 3 0.0 0.0 0.0 0.0 2.2282347423018667E-4 4 0.0 0.0 0.0 5.570586855754667E-5 2.2282347423018667E-4 5 0.0 0.0 0.0 5.570586855754667E-5 2.7852934278773333E-4 6 0.0 0.0 0.0 5.570586855754667E-5 2.7852934278773333E-4 7 0.0 0.0 0.0 1.1141173711509334E-4 2.7852934278773333E-4 8 0.0 0.0 0.0 1.1141173711509334E-4 2.7852934278773333E-4 9 0.0 0.0 0.0 1.1141173711509334E-4 2.7852934278773333E-4 10 0.0 0.0 0.0 1.1141173711509334E-4 2.7852934278773333E-4 11 0.0 0.0 0.0 1.1141173711509334E-4 2.7852934278773333E-4 12 0.0 0.0 0.0 1.1141173711509334E-4 6.127645541330134E-4 13 0.0 0.0 0.0 1.6711760567264002E-4 7.241762912481067E-4 14 0.0 0.0 0.0 1.6711760567264002E-4 7.798821598056534E-4 15 0.0 0.0 0.0 1.6711760567264002E-4 9.469997654782934E-4 16 0.0 0.0 0.0 1.6711760567264002E-4 9.469997654782934E-4 17 0.0 0.0 0.0 2.2282347423018667E-4 9.469997654782934E-4 18 0.0 0.0 0.0 2.2282347423018667E-4 9.469997654782934E-4 19 0.0 0.0 0.0 2.2282347423018667E-4 9.469997654782934E-4 20 0.0 0.0 0.0 3.3423521134528004E-4 0.0011141173711509333 21 0.0 0.0 0.0 5.013528170179201E-4 0.0014483525824962133 22 0.0 0.0 0.0 5.570586855754667E-4 0.0015597643196113068 23 0.0 0.0 0.0 9.469997654782934E-4 0.0016154701881688535 24 0.0 0.0 0.0 0.0013926467139386666 0.0016154701881688535 25 0.0 0.0 0.0 0.0016711760567264 0.0016154701881688535 26 0.0 0.0 0.0 0.0018939995309565868 0.00183829366239904 27 0.0 0.0 0.0 0.0022839406108594133 0.0018939995309565868 28 0.0 0.0 0.0 0.00300811690210752 0.0018939995309565868 29 0.0 0.0 0.0 0.0051806457758518405 0.0018939995309565868 30 0.0 0.0 0.0 0.009971350471800854 0.0018939995309565868 31 0.0 0.0 0.0 0.021112524183310187 0.0020054112680716802 32 0.0 0.0 0.0 0.03303358005462517 0.0020054112680716802 33 0.0 0.0 0.0 0.043617695080559044 0.0020054112680716802 34 0.0 0.0 0.0 0.05821263264263627 0.002061117136629227 35 0.0 0.0 0.0 0.0737545699701918 0.002061117136629227 36 0.0 0.0 0.0 0.0970396230272463 0.002061117136629227 37 0.0 0.0 0.0 0.13586661341185632 0.002061117136629227 38 0.0 0.0 0.0 0.1841636014512493 0.0021168230051867736 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2425 0.0 26.218573 1 TTAGGAC 1155 0.0 21.520826 3 TAGGACG 1780 0.0 20.637589 4 TGTTACG 65 4.938059E-4 20.304876 2 GTAGGAC 1695 0.0 20.244982 3 GACGTGA 1025 0.0 20.172813 7 TACACCG 135 2.6047928E-9 19.552843 5 AGGACGT 1895 0.0 19.385176 5 TAGGACA 715 0.0 19.381927 4 GGTATCA 1140 0.0 19.298258 1 ATCGATT 80 8.9877736E-5 19.251085 29 TGTAGGA 1765 0.0 19.192808 2 GGACGTG 1915 0.0 19.182718 6 GTCCTAC 1635 0.0 19.107046 1 TTTAGGA 1410 0.0 19.032824 2 ATACCGT 395 0.0 18.934084 6 TAGACTA 130 3.59596E-8 18.612804 5 AAATTCG 155 7.221388E-10 18.451626 21 TCCTACA 1790 0.0 18.433199 2 CGTCGTA 370 0.0 18.431417 10 >>END_MODULE