##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064092_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 865405 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.38908603486229 32.0 32.0 32.0 32.0 32.0 2 31.45531051935221 32.0 32.0 32.0 32.0 32.0 3 31.49638955171278 32.0 32.0 32.0 32.0 32.0 4 31.568896643767946 32.0 32.0 32.0 32.0 32.0 5 31.537906529312863 32.0 32.0 32.0 32.0 32.0 6 35.11409571241211 36.0 36.0 36.0 36.0 36.0 7 35.126375512043495 36.0 36.0 36.0 36.0 36.0 8 35.08072520958395 36.0 36.0 36.0 36.0 36.0 9 35.175753548916404 36.0 36.0 36.0 36.0 36.0 10 35.04889387049994 36.0 36.0 36.0 36.0 36.0 11 35.17418780802052 36.0 36.0 36.0 36.0 36.0 12 35.09095741300316 36.0 36.0 36.0 36.0 36.0 13 35.129868674204566 36.0 36.0 36.0 36.0 36.0 14 35.06650412234734 36.0 36.0 36.0 36.0 36.0 15 35.05504474783483 36.0 36.0 36.0 36.0 36.0 16 35.068224704040304 36.0 36.0 36.0 36.0 36.0 17 35.03599932979356 36.0 36.0 36.0 36.0 36.0 18 35.034131996001875 36.0 36.0 36.0 36.0 36.0 19 35.03231203887197 36.0 36.0 36.0 36.0 36.0 20 35.028481462436666 36.0 36.0 36.0 36.0 36.0 21 35.02716300460478 36.0 36.0 36.0 36.0 36.0 22 35.002450875601596 36.0 36.0 36.0 36.0 36.0 23 34.946845696523596 36.0 36.0 36.0 36.0 36.0 24 34.94162617502788 36.0 36.0 36.0 36.0 36.0 25 34.91808228517284 36.0 36.0 36.0 36.0 36.0 26 34.85650071353875 36.0 36.0 36.0 32.0 36.0 27 34.83841091743172 36.0 36.0 36.0 32.0 36.0 28 34.81809441822037 36.0 36.0 36.0 32.0 36.0 29 34.80685690514846 36.0 36.0 36.0 32.0 36.0 30 34.798084134018175 36.0 36.0 36.0 32.0 36.0 31 34.77902947175022 36.0 36.0 36.0 32.0 36.0 32 34.74390141032234 36.0 36.0 36.0 32.0 36.0 33 34.73773666664741 36.0 36.0 36.0 32.0 36.0 34 34.73916605519959 36.0 36.0 36.0 32.0 36.0 35 34.70194995406775 36.0 36.0 36.0 32.0 36.0 36 34.67239847239154 36.0 36.0 36.0 32.0 36.0 37 34.65812191979478 36.0 36.0 36.0 32.0 36.0 38 34.63485997885383 36.0 36.0 36.0 32.0 36.0 39 34.61463245532438 36.0 36.0 36.0 32.0 36.0 40 34.6129268954998 36.0 36.0 36.0 32.0 36.0 41 34.59513060359023 36.0 36.0 36.0 32.0 36.0 42 34.5676648505613 36.0 36.0 36.0 32.0 36.0 43 34.55189651088219 36.0 36.0 36.0 32.0 36.0 44 34.50740404781576 36.0 36.0 36.0 32.0 36.0 45 34.48433623563534 36.0 36.0 36.0 32.0 36.0 46 34.448386593560244 36.0 36.0 36.0 32.0 36.0 47 34.42597743253159 36.0 36.0 36.0 32.0 36.0 48 34.375463511303955 36.0 36.0 36.0 32.0 36.0 49 34.373871193256335 36.0 36.0 36.0 32.0 36.0 50 33.8048416637297 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 3.0 20 6.0 21 20.0 22 59.0 23 224.0 24 569.0 25 1465.0 26 3002.0 27 5496.0 28 9220.0 29 14818.0 30 21024.0 31 29917.0 32 42710.0 33 67511.0 34 138931.0 35 530429.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.33068926146265 18.570329076007823 12.586267467284232 26.51271419524529 2 15.410890442696507 20.294175763605544 37.82396831064443 26.470965483053522 3 17.9925422028812 23.9900947882085 29.197264164787967 28.820098844122334 4 12.542566775093741 16.678087138391852 36.048786406364655 34.73055968014976 5 14.060699903513385 37.162600169862664 33.9701064819362 14.806593444687746 6 33.833716777039136 35.87369121669327 17.037611378744934 13.25498062752267 7 30.05313125430435 30.6989567878124 20.78751658185079 18.460395376032466 8 27.43050941466712 34.336755623089765 19.142829080026114 19.089905882216996 9 27.2529674413445 14.675083661508312 18.71787582968181 39.35407306746538 10 15.96021271039355 27.686323812517188 32.35814107201047 23.995322405078795 11 36.14296196578481 21.503920129881386 23.104904640024035 19.248213264309776 12 24.370177096886763 24.080600691932766 29.371205520671317 22.17801669050915 13 29.846694992714344 20.281165104188933 25.092125135342197 24.780014767754526 14 23.03657722075983 19.846152423960195 25.715910062606746 31.401360292673232 15 24.744907981982355 28.04405956268619 22.24876180703372 24.96227064829773 16 24.691529215459244 26.516469878599214 24.404378101174256 24.387622804767286 17 23.90938346785609 26.38706732685852 25.650533565209354 24.053015640076033 18 23.968574215048694 26.198168716576305 26.432279028060883 23.40097804031412 19 25.252800711805456 25.419543450754272 25.77117072353407 23.556485113906206 20 25.83987270611591 25.214496434592597 25.356858512662946 23.588772346628552 21 25.863497437615912 24.97142956188143 24.963340863526327 24.20173213697633 22 25.59452001608497 25.234225864451748 25.29396674847817 23.877287370985112 23 24.560493273646237 25.465043991116264 25.561877601392187 24.41258513384531 24 24.53440659301295 25.520770140085347 25.653194299521264 24.29162896738044 25 24.657611810601438 25.424431933736386 25.481515891064394 24.43644036459778 26 24.366709384869438 25.771441051769145 25.74752039900111 24.114329164360306 27 24.73762061593575 25.771190847633907 25.08175882590859 24.409429710521753 28 24.5568947386667 25.49487502455597 25.41768260975074 24.53054762702659 29 24.5153007573534 25.62960634725474 25.37087667642729 24.484216218964573 30 24.543256841613836 25.535207068454273 25.593101647164325 24.32843444276757 31 24.953313148588993 25.243603670233668 25.232278641921095 24.570804539256248 32 24.86407595337502 25.624903943155147 25.15250649142046 24.35851361204937 33 24.332076064749334 25.771925932089008 25.466044503610025 24.429953499551633 34 24.71939975294005 25.49998439986272 25.673550371687714 24.10706547550952 35 24.760711780618667 25.648415318606066 25.65165089515692 23.939222005618348 36 24.330898837451176 25.71867705179467 25.620334203896732 24.33008990685742 37 24.897933713826127 25.24275771376141 25.162791826376957 24.696516746035506 38 24.509958004654848 25.589078899014716 25.475596706011782 24.42536639031865 39 24.934883043706364 25.22273812467788 25.385212730798294 24.457166100817457 40 25.037209087337352 25.073378169128013 25.640296748249327 24.249115995285308 41 24.69932284083293 25.210312232776356 25.634172271141004 24.456192655249716 42 24.73500478973137 25.4363046615815 25.710630892554022 24.11805965613311 43 24.508025283398236 25.208056483204107 25.794612833520148 24.489305399877512 44 24.316728988809746 25.389185991153184 25.45308737271723 24.84099764731984 45 24.589260333491257 25.24514958573591 25.452917181848644 24.712672898924186 46 24.47402631168426 24.99298008423899 25.59432397922336 24.93866962485339 47 24.67918903147154 25.030939986248896 25.720228568787302 24.56964241349226 48 24.164193798879584 25.317197293249766 25.63462569563851 24.883983212232145 49 24.511210948874744 25.21446630706583 25.62895480030136 24.64536794375806 50 24.354340335153697 25.671081611381634 25.561073915465094 24.41350413799957 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3.0 1 7.5 2 12.0 3 28.0 4 44.0 5 70.5 6 97.0 7 99.0 8 101.0 9 129.0 10 157.0 11 255.5 12 354.0 13 625.0 14 896.0 15 1175.5 16 1455.0 17 1495.5 18 1536.0 19 1550.0 20 1564.0 21 1770.0 22 1976.0 23 2477.5 24 2979.0 25 3992.0 26 5005.0 27 6182.0 28 7359.0 29 9442.5 30 11526.0 31 14045.0 32 16564.0 33 19641.0 34 22718.0 35 27245.5 36 31773.0 37 34476.5 38 37180.0 39 39627.5 40 42075.0 41 45211.5 42 48348.0 43 49822.5 44 51297.0 45 54322.5 46 57348.0 47 59895.0 48 62442.0 49 65076.0 50 67710.0 51 68500.5 52 69291.0 53 67808.0 54 66325.0 55 64906.5 56 63488.0 57 59006.5 58 54525.0 59 48567.0 60 42609.0 61 36817.0 62 31025.0 63 27030.0 64 23035.0 65 19163.0 66 15291.0 67 13123.0 68 10955.0 69 8761.5 70 6568.0 71 5098.5 72 3629.0 73 2953.0 74 2277.0 75 1863.5 76 1450.0 77 1231.0 78 1012.0 79 785.0 80 558.0 81 476.5 82 395.0 83 308.5 84 222.0 85 174.0 86 126.0 87 86.5 88 47.0 89 36.0 90 25.0 91 20.0 92 15.0 93 10.5 94 6.0 95 6.5 96 7.0 97 4.5 98 2.0 99 2.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008435356856038502 2 4.6221133457745214E-4 3 2.3110566728872607E-4 4 0.0 5 0.0 6 2.3110566728872607E-4 7 1.1555283364436303E-4 8 0.0 9 0.0015021868373767196 10 3.4665850093308913E-4 11 0.0 12 3.4665850093308913E-4 13 6.933170018661783E-4 14 3.4665850093308913E-4 15 0.0035821378429752543 16 8.088698355105412E-4 17 0.0 18 1.1555283364436303E-4 19 0.0 20 6.933170018661783E-4 21 0.0 22 1.1555283364436303E-4 23 3.4665850093308913E-4 24 4.6221133457745214E-4 25 0.0015021868373767196 26 0.005084324680351974 27 0.006355405850439967 28 0.004044349177552706 29 0.00265771517382035 30 0.004506560512130158 31 0.0075109341868835975 32 0.003697690676619617 33 0.004275454844841433 34 0.003235479342042165 35 0.003004373674753439 36 0.0075109341868835975 37 0.004159902011197069 38 0.008204251188749775 39 0.004506560512130158 40 0.0028888208411090763 41 0.0028888208411090763 42 0.0013866340037323565 43 0.0017332925046654455 44 0.0010399755027992673 45 0.0017332925046654455 46 0.0011555283364436304 47 0.002311056672887261 48 0.0015021868373767196 49 1.1555283364436303E-4 50 0.0012710811700879935 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 865405.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.49691852596288 #Duplication Level Percentage of deduplicated Percentage of total 1 62.17209412428528 28.28638700961103 2 16.342594422332613 14.870753738714445 3 7.80943722795247 10.65915987881325 4 4.375004772591191 7.961969427571206 5 2.645826564010459 6.018847780830608 6 1.773979087372067 4.842634920295735 7 1.2063974056846578 3.842115513345749 8 0.8024917263778457 2.9208720554217713 9 0.6197827598082155 2.5378385154111722 >10 2.1879757698261924 15.405057052999046 >50 0.04907963874752885 1.522824241373824 >100 0.01533650101154804 1.1315398656121636 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 1.1555283364436305E-4 0.0 6 0.0 0.0 0.0 1.1555283364436305E-4 0.0 7 0.0 0.0 0.0 1.1555283364436305E-4 0.0 8 0.0 0.0 0.0 1.1555283364436305E-4 0.0 9 0.0 0.0 0.0 2.311056672887261E-4 0.0 10 0.0 0.0 0.0 2.311056672887261E-4 0.0 11 0.0 0.0 0.0 4.622113345774522E-4 0.0 12 0.0 0.0 0.0 4.622113345774522E-4 0.0 13 0.0 0.0 0.0 4.622113345774522E-4 0.0 14 0.0 0.0 0.0 4.622113345774522E-4 0.0 15 0.0 0.0 0.0 4.622113345774522E-4 0.0 16 0.0 0.0 0.0 4.622113345774522E-4 0.0 17 0.0 0.0 0.0 4.622113345774522E-4 0.0 18 0.0 0.0 0.0 4.622113345774522E-4 0.0 19 0.0 0.0 0.0 4.622113345774522E-4 0.0 20 0.0 0.0 0.0 5.777641682218152E-4 0.0 21 0.0 0.0 0.0 5.777641682218152E-4 0.0 22 0.0 0.0 0.0 5.777641682218152E-4 0.0 23 0.0 0.0 0.0 5.777641682218152E-4 0.0 24 0.0 0.0 0.0 5.777641682218152E-4 0.0 25 0.0 0.0 0.0 6.933170018661783E-4 0.0 26 0.0 0.0 0.0 9.244226691549044E-4 0.0 27 0.0 0.0 0.0 0.0011555283364436304 0.0 28 0.0 0.0 0.0 0.002195503839242898 0.0 29 0.0 0.0 0.0 0.004853219013063248 0.0 30 0.0 0.0 0.0 0.010399755027992674 0.0 31 0.0 0.0 0.0 0.028310444242868944 0.0 32 0.0 0.0 0.0 0.046105580624100855 0.0 33 0.0 0.0 0.0 0.06678953784644184 0.0 34 0.0 0.0 0.0 0.08932234040709264 0.0 35 0.0 0.0 0.0 0.11624615064622922 0.0 36 0.0 0.0 0.0 0.15518745558437957 0.0 37 0.0 0.0 0.0 0.2188570669224236 0.0 38 0.0 0.0 0.0 0.31857916235750894 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1040 0.0 31.100893 1 GGTATCA 330 0.0 30.671337 1 GTATAAC 60 9.737276E-6 25.67058 1 TATCAAC 1520 0.0 20.840462 2 GCGTTAT 65 4.931304E-4 20.307264 43 CGGTTCG 55 0.0044831457 19.99958 41 AGTACCG 55 0.004484645 19.998425 5 ATCAACG 1575 0.0 19.97303 3 TCAACGC 1585 0.0 19.847015 4 CTTAGTA 100 1.1235297E-6 19.79844 2 CAACGCA 1650 0.0 19.33181 5 TTAGGAC 345 0.0 19.128927 3 AGTCGAC 60 0.0074088695 18.334007 26 AACGCAG 1770 0.0 18.145464 6 TGGACCG 85 1.4311016E-4 18.116219 5 TAGGACG 430 0.0 17.905565 4 ATTAGTC 75 0.00129115 17.598614 3 CTATTAG 90 2.2118796E-4 17.113718 1 GACGTGA 305 0.0 16.588856 7 CATTATA 135 1.0854637E-6 16.295012 2 >>END_MODULE