##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064089_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 930025 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.21378134996371 32.0 32.0 32.0 32.0 32.0 2 30.8230950780893 32.0 32.0 32.0 32.0 32.0 3 30.843013897475874 32.0 32.0 32.0 32.0 32.0 4 30.866915405499853 32.0 32.0 32.0 32.0 32.0 5 30.785870272304507 32.0 32.0 32.0 32.0 32.0 6 34.43113142119835 36.0 36.0 36.0 32.0 36.0 7 34.335507110023926 36.0 36.0 36.0 32.0 36.0 8 34.29611677105454 36.0 36.0 36.0 32.0 36.0 9 34.413210397569955 36.0 36.0 36.0 32.0 36.0 10 34.1268320744066 36.0 36.0 36.0 32.0 36.0 11 34.444005268675575 36.0 36.0 36.0 32.0 36.0 12 34.217001693502866 36.0 36.0 36.0 32.0 36.0 13 34.31262062847773 36.0 36.0 36.0 32.0 36.0 14 34.22193059326362 36.0 36.0 36.0 32.0 36.0 15 34.14840568801914 36.0 36.0 36.0 32.0 36.0 16 34.14954759280665 36.0 36.0 36.0 32.0 36.0 17 34.06875299051101 36.0 36.0 36.0 32.0 36.0 18 34.06722614983468 36.0 36.0 36.0 32.0 36.0 19 34.07714308755141 36.0 36.0 36.0 32.0 36.0 20 34.055671621730596 36.0 36.0 36.0 32.0 36.0 21 34.02393161474154 36.0 36.0 36.0 32.0 36.0 22 33.99103572484611 36.0 36.0 36.0 32.0 36.0 23 33.94925190183059 36.0 36.0 36.0 32.0 36.0 24 33.94102739173678 36.0 36.0 36.0 32.0 36.0 25 33.53972957716191 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 5.0 4 7.0 5 13.0 6 37.0 7 17.0 8 67.0 9 48.0 10 75.0 11 31.0 12 47.0 13 50.0 14 116.0 15 178.0 16 294.0 17 355.0 18 499.0 19 620.0 20 981.0 21 1428.0 22 2354.0 23 3607.0 24 5205.0 25 7455.0 26 10751.0 27 14019.0 28 19009.0 29 25756.0 30 33804.0 31 46392.0 32 66061.0 33 93506.0 34 198281.0 35 398956.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.81928719099383 17.52711165419276 11.572981496739718 25.080619658073687 2 16.038607240362975 20.234822001739822 38.58971312317133 25.136857634725875 3 18.807667452680565 24.91083419622821 28.886494646826 27.395003704265225 4 12.021084075007177 15.588968065282351 36.73981791221635 35.650129947494115 5 13.939931608490872 37.45499709658688 33.55786394821171 15.04720734671054 6 32.996377002515345 36.441504560202084 17.350921019945307 13.211197417337264 7 29.321183167725845 31.136394678907177 21.019800840817844 18.522621312549138 8 27.99206618966281 33.02201159093549 19.7116894627468 19.27423275665489 9 27.78017429170463 13.67095851831612 18.945751411104453 39.603115778874795 10 16.01535897681414 26.630331289558022 31.40736469178226 25.94694504184557 11 37.09757065812024 21.072047560491484 23.086977991653676 18.743403789734604 12 24.988917962798784 23.882973687155165 29.34727876810783 21.780829581938217 13 29.662059148525483 19.63164242761369 25.77427070343643 24.932027720424394 14 23.45341745893067 20.328296413615607 25.660638430650177 30.557647696803542 15 24.59160136161569 28.35336595358285 22.92207289205624 24.132959792745222 16 24.842884026300585 25.963488625567432 25.15426469939499 24.039362648736994 17 23.016572362468114 26.324804532626672 26.0575465415159 24.601076563389313 18 23.99151200027547 25.03238955270135 27.901178506249785 23.074919940773388 19 25.344577312399185 24.62879051184352 26.15258138416295 23.87405079159435 20 25.597173768473702 24.329760011363465 25.863397374781282 24.20966884538155 21 27.164723541849366 23.854757920901278 24.830283694429948 24.150234842819405 22 25.681345441358612 24.749677445736097 25.587834296960832 23.981142815944455 23 23.81003624342496 24.586773302111762 26.39593143880371 25.207259015659574 24 24.50351007829347 25.274285394544854 26.27275309795077 23.94945142921091 25 24.393015440537948 24.94514729793276 26.33500016679095 24.326837094738337 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 160.0 1 160.0 2 419.0 3 678.0 4 678.0 5 678.0 6 1859.0 7 3040.0 8 3040.0 9 3040.0 10 2943.5 11 2847.0 12 2847.0 13 2847.0 14 2668.5 15 2490.0 16 2490.0 17 2490.0 18 4383.0 19 6276.0 20 6276.0 21 6276.0 22 10728.5 23 15181.0 24 15181.0 25 15181.0 26 24056.0 27 32931.0 28 32931.0 29 32931.0 30 41802.5 31 50674.0 32 50674.0 33 50674.0 34 58539.0 35 66404.0 36 66404.0 37 66404.0 38 72465.0 39 78526.0 40 78526.0 41 78526.0 42 88570.0 43 98614.0 44 98614.0 45 98614.0 46 109679.0 47 120744.0 48 120744.0 49 120744.0 50 120878.0 51 121012.0 52 121012.0 53 121012.0 54 108135.5 55 95259.0 56 95259.0 57 95259.0 58 87831.0 59 80403.0 60 80403.0 61 80403.0 62 72010.0 63 63617.0 64 63617.0 65 63617.0 66 53301.5 67 42986.0 68 42986.0 69 42986.0 70 32384.0 71 21782.0 72 21782.0 73 21782.0 74 17047.0 75 12312.0 76 12312.0 77 12312.0 78 10050.5 79 7789.0 80 7789.0 81 7789.0 82 5323.5 83 2858.0 84 2858.0 85 2858.0 86 2289.0 87 1720.0 88 1720.0 89 1720.0 90 1230.0 91 740.0 92 740.0 93 740.0 94 534.0 95 328.0 96 328.0 97 328.0 98 491.0 99 654.0 100 654.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0377409209429854 2 0.0047310556167844955 3 0.0017203838606489072 4 0.003655815703878928 5 0.00913953925969732 6 0.014193166850353484 7 0.02322518211876025 8 0.03580548909975539 9 0.046665412220101614 10 0.05763285933173839 11 0.05526733152334615 12 0.06376172683530013 13 0.06472944275691514 14 0.06677239859143572 15 0.058170479288191176 16 0.06623477863498294 17 0.06300905889626623 18 0.07666460579016693 19 0.07505174592080857 20 0.07860003763339696 21 0.07311631407757856 22 0.07784736969436305 23 0.0809655654417892 24 0.07537431789468026 25 0.07720222574661971 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 930025.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.14568463687092 #Duplication Level Percentage of deduplicated Percentage of total 1 77.53158448216375 38.10342800357335 2 13.386015957742986 13.15729837606717 3 3.9683221823191506 5.8507773152926905 4 1.684723858625297 3.3118762982484466 5 0.888981501525226 2.1844802260985374 6 0.5094920591107617 1.5023601637228494 7 0.36024916132205576 1.239328417112169 8 0.2498281407495214 0.9822380014953422 9 0.16949158233599837 0.7496801868680295 >10 1.0112584452997753 9.159722332198587 >50 0.1047633156432537 3.657479982217608 >100 0.11749964699422251 12.198115183952108 >500 0.013616781511327482 4.6132042860950255 >1k 0.0041728846566971315 3.2900112270580832 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 4374 0.47030993790489506 No Hit TATCAACGCAGAGTACTTTTTTTTT 3054 0.32837826940136017 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2523 0.27128303002607457 No Hit GTACATGGGGTGGTATCAACGCAAA 1717 0.18461869304588588 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1706 0.18343592914168974 No Hit GGTATCAACGCAGAGTACTTTTTTT 1629 0.17515658181231686 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1527 0.16418913470068008 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1328 0.1427918604338593 No Hit GTATCTGATCGTCTTCGAACCTCCG 1272 0.13677051692158812 No Hit GATTAAGAGGGACGGCCGGGGGCAT 1260 0.13548022902610143 No Hit GAATAGGACCGCGGTTCTATTTTGT 1205 0.12956640950512083 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1197 0.1287062175747964 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1191 0.12806107362705305 No Hit CTATTGGAGCTGGAATTACCGCGGC 1163 0.12505040187091745 No Hit GAACTACGACGGTATCTGATCGTCT 1127 0.12117953818445741 No Hit GAATAACGCCGCCGCATCGCCAGTC 1118 0.1202118222628424 No Hit GTCCTATTCCATTATTCCTAGCTGC 1057 0.11365285879411843 No Hit ATCAGATACCGTCGTAGTTCCGACC 1017 0.10935189914249618 No Hit GTATCAACGCAGAGTACATGGGGTG 1016 0.10924437515120562 No Hit GGGTAGGCACACGCTGAGCCAGTCA 997 0.10720141931668505 No Hit GTACATGGGGAATAATTGCAATCCC 976 0.10494341549958333 No Hit CTTTAATATACGCTATTGGAGCTGG 950 0.10214779172602888 No Hit TCGTAGTTCCGACCATAAACGATGC 940 0.10107255181312332 No Hit CTCTTAATCATGGCCTCAGTTCCGA 936 0.10064245584796108 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 1.075239912905567E-4 7 0.0 0.0 0.0 0.0 1.075239912905567E-4 8 0.0 0.0 0.0 0.0 1.075239912905567E-4 9 0.0 0.0 0.0 0.0 1.075239912905567E-4 10 0.0 0.0 0.0 1.075239912905567E-4 1.075239912905567E-4 11 0.0 0.0 0.0 1.075239912905567E-4 1.075239912905567E-4 12 0.0 0.0 0.0 1.075239912905567E-4 2.150479825811134E-4 13 0.0 0.0 0.0 1.075239912905567E-4 3.225719738716701E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGC 35 0.0021721085 16.282578 5 CGCATCG 245 0.0 15.124419 13 GTATTAC 45 6.779639E-4 14.771753 1 CGGACAT 65 3.3753386E-6 14.61257 5 GCATCGC 245 0.0 14.349581 14 CGAACGA 100 6.566552E-10 14.251857 16 TTAGACC 60 2.5720386E-5 14.246489 4 CTAAACC 40 0.0052893967 14.244957 3 CGCCAGT 255 0.0 14.158708 18 GCTCGTA 95 4.8821676E-9 14.001824 9 ATCGCCA 270 0.0 13.7240095 16 AGACCGT 50 0.0014997162 13.29887 6 GCTTAGG 50 0.0015033692 13.294578 1 CCGCATC 280 0.0 13.23458 12 CGCCCCT 180 0.0 13.191903 5 TTTTCGG 140 3.6379788E-12 12.894538 16 TCGCCAG 275 0.0 12.783484 17 ATCACGA 90 5.385082E-7 12.669 12 CCGACCA 225 0.0 12.668317 9 GGACCGT 60 4.092208E-4 12.66559 6 >>END_MODULE