##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064089_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 930025 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.244437515120563 32.0 32.0 32.0 32.0 32.0 2 31.430836805462217 32.0 32.0 32.0 32.0 32.0 3 31.49879089271794 32.0 32.0 32.0 32.0 32.0 4 31.581683288083653 32.0 32.0 32.0 32.0 32.0 5 31.524180532781376 32.0 32.0 32.0 32.0 32.0 6 35.120661272546435 36.0 36.0 36.0 36.0 36.0 7 35.13304481062337 36.0 36.0 36.0 36.0 36.0 8 35.094444772989974 36.0 36.0 36.0 36.0 36.0 9 35.19194107685277 36.0 36.0 36.0 36.0 36.0 10 35.050679282814976 36.0 36.0 36.0 36.0 36.0 11 35.19278836590414 36.0 36.0 36.0 36.0 36.0 12 35.09701459638182 36.0 36.0 36.0 36.0 36.0 13 35.1386629391683 36.0 36.0 36.0 36.0 36.0 14 35.07581409101906 36.0 36.0 36.0 36.0 36.0 15 35.05651891078197 36.0 36.0 36.0 36.0 36.0 16 35.066793903389694 36.0 36.0 36.0 36.0 36.0 17 35.02940458589823 36.0 36.0 36.0 36.0 36.0 18 35.02644660089783 36.0 36.0 36.0 36.0 36.0 19 35.01330824440203 36.0 36.0 36.0 36.0 36.0 20 35.00050428751915 36.0 36.0 36.0 36.0 36.0 21 35.00058278003279 36.0 36.0 36.0 36.0 36.0 22 34.983627321846186 36.0 36.0 36.0 36.0 36.0 23 34.94393914142093 36.0 36.0 36.0 36.0 36.0 24 34.899296255477005 36.0 36.0 36.0 32.0 36.0 25 34.87283352598048 36.0 36.0 36.0 32.0 36.0 26 34.81240289239537 36.0 36.0 36.0 32.0 36.0 27 34.816129673933496 36.0 36.0 36.0 32.0 36.0 28 34.77524045052552 36.0 36.0 36.0 32.0 36.0 29 34.74569608343862 36.0 36.0 36.0 32.0 36.0 30 34.72377194161447 36.0 36.0 36.0 32.0 36.0 31 34.71445176204941 36.0 36.0 36.0 32.0 36.0 32 34.679774199618286 36.0 36.0 36.0 32.0 36.0 33 34.631515281847264 36.0 36.0 36.0 32.0 36.0 34 34.6153888336335 36.0 36.0 36.0 32.0 36.0 35 34.56477836617295 36.0 36.0 36.0 32.0 36.0 36 34.52407085831026 36.0 36.0 36.0 32.0 36.0 37 34.51080884922448 36.0 36.0 36.0 32.0 36.0 38 34.44409666406817 36.0 36.0 36.0 32.0 36.0 39 34.431128195478614 36.0 36.0 36.0 32.0 36.0 40 34.39647321308567 36.0 36.0 36.0 32.0 36.0 41 34.369013736189885 36.0 36.0 36.0 32.0 36.0 42 34.28225262761754 36.0 36.0 36.0 32.0 36.0 43 34.28713959302169 36.0 36.0 36.0 32.0 36.0 44 34.19133571678181 36.0 36.0 36.0 32.0 36.0 45 34.147469154054995 36.0 36.0 36.0 32.0 36.0 46 34.07765812746969 36.0 36.0 36.0 32.0 36.0 47 34.02395957097927 36.0 36.0 36.0 32.0 36.0 48 33.95990752936749 36.0 36.0 36.0 32.0 36.0 49 33.91306470256176 36.0 36.0 36.0 32.0 36.0 50 33.32804064406871 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 0.0 19 1.0 20 9.0 21 30.0 22 118.0 23 327.0 24 772.0 25 1820.0 26 3794.0 27 6980.0 28 11588.0 29 17272.0 30 24661.0 31 34783.0 32 49723.0 33 79339.0 34 161031.0 35 537775.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.19537436501826 18.37543604588644 12.04648001823758 25.382709570857724 2 15.509690599715062 21.040724711701298 38.04639660224188 25.403188086341764 3 17.99215502428975 25.61218981916557 29.188234256824032 27.207420899720653 4 11.639687105185345 16.14064138060805 36.99147872369022 35.22819279051638 5 13.620816644713852 37.80898362947232 33.342652079245184 15.22754764656864 6 33.05943388618586 36.83653665224053 17.017176957608665 13.086852503964947 7 29.20072041074165 31.34915728071826 21.06620789763716 18.383914410902932 8 27.989062647845646 33.33892458689238 19.4591752470904 19.212837518171575 9 27.854281920184082 13.48924479712693 18.850663698972596 39.80580958371639 10 16.049526082912642 26.918598087127627 31.375407923528115 25.65646790643162 11 37.17921561248353 21.07846563264428 22.95658718851644 18.785731566355743 12 24.878067662769993 24.093786827006614 29.242901258462144 21.785244251761245 13 29.703081015636258 19.601878673316 25.84175790145997 24.85328240958777 14 23.49995645268988 20.36035667935094 25.575926616868617 30.563760251090567 15 24.652222581848797 28.339087955938698 22.8673397299073 24.141349732305205 16 24.805111298921094 26.081323157186205 25.10177222376341 24.01179332012929 17 23.106798204349346 26.43735383457434 25.868551920647292 24.58729604042902 18 24.086767933197205 24.90621179521753 28.041732390989022 22.965287880596243 19 25.376979518808117 24.580871031285216 26.269107033796978 23.77304241610969 20 25.708073886344746 24.206605643086245 25.93882086787101 24.146499602698 21 27.11195935593129 23.855917851670654 25.00577941453187 24.026343377866187 22 25.65460676283623 24.606354244621645 25.845139480271477 23.89389951227065 23 23.774460521774287 24.413479724607775 26.584295589659995 25.22776416395794 24 24.468776007449286 25.12833029756285 26.411095651500716 23.99179804348714 25 24.47199038281638 24.6658609336324 26.576394459366753 24.285754224184465 26 23.686310184348844 25.935830602080053 27.07241907318038 23.305440140390722 27 24.557300403451272 25.14699304068062 26.171428079864427 24.12427847600368 28 23.475729742168163 25.39661887383251 26.859006479667435 24.268644904331893 29 23.596287303843663 24.79446192357403 26.569196923004135 25.04005384957817 30 23.325494547796698 25.606161780060237 26.94864789014087 24.11969578200219 31 24.540866855420507 25.100891544681005 25.64586180681084 24.712379793087653 32 24.08899460101141 25.548689285572195 25.49428003987144 24.868036073544957 33 23.556502767260838 25.055673180419813 26.58763996253687 24.80018408978248 34 24.47843749529567 25.282098594184475 26.512644167596783 23.726819742923073 35 25.100188926153205 25.14674841638593 26.50353282229006 23.2495298351708 36 23.464151527729687 26.112166135092295 25.95807050332171 24.465611833856304 37 24.64545127071942 25.904718893315483 25.632026323005206 23.817803512959888 38 23.989534842458085 25.586514442283022 25.995786838548167 24.428163876710723 39 24.902579388121136 24.9934407755799 25.589900084732275 24.514079751566687 40 25.3305376344086 25.524193548387096 26.02709677419355 23.118172043010755 41 23.77806906147747 25.688426562636092 26.9142554218733 23.619248954013138 42 25.40657946377209 26.426778062719418 25.744853577630465 22.421788895878024 43 24.085929704435195 25.226017616901213 26.30911726249871 24.378935416164882 44 23.599107110215545 26.15014397632724 25.533701643201066 24.717047270256145 45 23.823210313018475 26.34684180475673 25.524591697499698 24.305356184725095 46 23.72684164686401 25.59628391092569 25.504349415597684 25.172525026612618 47 24.305832586916758 25.535833909498827 25.99798494406983 24.16034855951458 48 25.099945161879976 25.99498930119031 24.650702680616337 24.25436285631337 49 24.044214102922517 26.48814003999914 25.111072880153113 24.35657297692523 50 24.194523057866167 26.84772604106631 24.5719391661147 24.385811734952817 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 52.0 1 46.0 2 40.0 3 102.0 4 164.0 5 194.0 6 224.0 7 234.0 8 244.0 9 335.0 10 426.0 11 657.5 12 889.0 13 1561.0 14 2233.0 15 3209.5 16 4186.0 17 4608.0 18 5030.0 19 5074.0 20 5118.0 21 5412.0 22 5706.0 23 6239.5 24 6773.0 25 6853.0 26 6933.0 27 8780.0 28 10627.0 29 12601.0 30 14575.0 31 16896.5 32 19218.0 33 22628.5 34 26039.0 35 30372.0 36 34705.0 37 38459.0 38 42213.0 39 43431.0 40 44649.0 41 46772.5 42 48896.0 43 48262.5 44 47629.0 45 52471.5 46 57314.0 47 60734.0 48 64154.0 49 66197.0 50 68240.0 51 64286.5 52 60333.0 53 59396.5 54 58460.0 55 59730.5 56 61001.0 57 59667.0 58 58333.0 59 53128.5 60 47924.0 61 41783.5 62 35643.0 63 31225.5 64 26808.0 65 22924.5 66 19041.0 67 16801.5 68 14562.0 69 13461.0 70 12360.0 71 9516.5 72 6673.0 73 5743.0 74 4813.0 75 3692.0 76 2571.0 77 2329.0 78 2087.0 79 1706.5 80 1326.0 81 1050.0 82 774.0 83 657.0 84 540.0 85 387.0 86 234.0 87 167.5 88 101.0 89 75.5 90 50.0 91 48.0 92 46.0 93 35.0 94 24.0 95 21.0 96 18.0 97 17.0 98 16.0 99 13.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008279347329372867 2 0.0 3 3.225719738716701E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 1.075239912905567E-4 9 0.001075239912905567 10 0.001075239912905567 11 0.0 12 1.075239912905567E-4 13 7.526679390338969E-4 14 2.150479825811134E-4 15 0.005161151581946722 16 7.526679390338969E-4 17 0.0 18 4.300959651622268E-4 19 1.075239912905567E-4 20 2.150479825811134E-4 21 0.0 22 1.075239912905567E-4 23 6.451439477433402E-4 24 3.225719738716701E-4 25 0.0024730517996828043 26 0.005268675573237278 27 0.005268675573237278 28 0.004193435660331712 29 0.002903147764845031 30 0.003655815703878928 31 0.007096583425176742 32 0.003870863686460041 33 0.0047310556167844955 34 0.0033332437300072574 35 0.0034407677212978144 36 0.008924491277116206 37 0.004300959651622268 38 0.00881696728582565 39 0.003978387677750598 40 0.0026880997822639175 41 0.0045160076342033815 42 0.001075239912905567 43 9.677159216150103E-4 44 0.0011827639041961239 45 0.0017203838606489072 46 0.0016128598693583504 47 0.002795623773554474 48 0.0016128598693583504 49 5.376199564527835E-4 50 0.001827907851939464 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 930025.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.281213801165265 #Duplication Level Percentage of deduplicated Percentage of total 1 78.96384303243896 42.86253246205474 2 12.81437904576475 13.911600974246571 3 3.668638513690814 5.974144545625207 4 1.557127126401428 3.3809100185516 5 0.792227744977917 2.1501541802180673 6 0.4998260153593158 1.627869768186212 7 0.29663624733267596 1.1271242893848226 8 0.2256873187931457 0.9800465282897989 9 0.16190369429729584 0.7909496140815014 >10 0.8260064322120384 8.192445430843668 >50 0.0877870270232692 3.325092176200048 >100 0.09356841623693606 10.464595832826012 >500 0.009975310864106132 3.6769196392554666 >1k 0.0023940746073854717 1.5356145402362829 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1367 0.14698529609419103 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1334 0.14343700438160265 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1326 0.14257681245127818 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1307 0.1405338566167576 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1187 0.1276309776618908 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 1153 0.12397516195801189 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1152 0.12386763796672132 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1107 0.11902905835864627 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 1104 0.1187064863847746 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1068 0.11483562269831457 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 1058 0.11376038278540901 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1017 0.10935189914249618 No Hit GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAG 983 0.10569608343861724 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 979 0.105265987473455 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 968 0.10408322356925889 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA 944 0.10150264777828552 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 1.075239912905567E-4 0.0 11 0.0 0.0 0.0 1.075239912905567E-4 0.0 12 0.0 0.0 0.0 1.075239912905567E-4 3.225719738716701E-4 13 0.0 0.0 0.0 1.075239912905567E-4 3.225719738716701E-4 14 0.0 0.0 0.0 2.150479825811134E-4 3.225719738716701E-4 15 0.0 0.0 1.075239912905567E-4 3.225719738716701E-4 3.225719738716701E-4 16 0.0 0.0 1.075239912905567E-4 4.300959651622268E-4 3.225719738716701E-4 17 0.0 0.0 1.075239912905567E-4 4.300959651622268E-4 3.225719738716701E-4 18 0.0 0.0 1.075239912905567E-4 4.300959651622268E-4 3.225719738716701E-4 19 0.0 0.0 1.075239912905567E-4 6.451439477433402E-4 3.225719738716701E-4 20 0.0 0.0 1.075239912905567E-4 7.526679390338969E-4 4.300959651622268E-4 21 0.0 0.0 1.075239912905567E-4 0.001075239912905567 4.300959651622268E-4 22 0.0 0.0 1.075239912905567E-4 0.0012902878954866805 4.300959651622268E-4 23 0.0 0.0 1.075239912905567E-4 0.002150479825811134 4.300959651622268E-4 24 0.0 0.0 1.075239912905567E-4 0.004085911669041155 4.300959651622268E-4 25 0.0 0.0 1.075239912905567E-4 0.005161151581946722 4.300959651622268E-4 26 0.0 0.0 1.075239912905567E-4 0.006558963468723959 4.300959651622268E-4 27 0.0 0.0 1.075239912905567E-4 0.00849439531195398 4.300959651622268E-4 28 0.0 0.0 1.075239912905567E-4 0.012902878954866805 4.300959651622268E-4 29 0.0 0.0 1.075239912905567E-4 0.020859654310368 4.300959651622268E-4 30 0.0 0.0 1.075239912905567E-4 0.0384935888820193 4.300959651622268E-4 31 0.0 0.0 1.075239912905567E-4 0.06999811833015242 4.300959651622268E-4 32 0.0 0.0 1.075239912905567E-4 0.10300798365635333 4.300959651622268E-4 33 0.0 0.0 1.075239912905567E-4 0.13128679336576973 5.376199564527835E-4 34 0.0 0.0 1.075239912905567E-4 0.1644041826832612 5.376199564527835E-4 35 0.0 0.0 1.075239912905567E-4 0.20483320340851052 5.376199564527835E-4 36 0.0 0.0 1.075239912905567E-4 0.2592403430015322 5.376199564527835E-4 37 0.0 0.0 1.075239912905567E-4 0.34160372033009867 5.376199564527835E-4 38 0.0 0.0 1.075239912905567E-4 0.44988037955968924 5.376199564527835E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCTTA 65 5.934926E-7 27.07368 17 GATATAC 420 0.0 22.000914 1 GTCCTAA 335 0.0 21.015799 1 CGCTTCG 315 0.0 20.955505 32 GACGCTT 85 6.1172723E-6 20.703402 16 CGCTTAC 85 6.1172723E-6 20.703402 18 CGCGGGA 330 0.0 20.666414 44 CTCGACG 75 5.471408E-5 20.533083 13 AACGTAT 130 1.6207196E-9 20.31072 31 GTAAACG 325 0.0 20.308537 27 GCATATA 65 4.9296045E-4 20.308537 1 AACGCTT 335 0.0 19.70443 30 TAAACGC 340 0.0 19.41257 28 ACGTATG 115 2.0169864E-7 19.133287 32 AAACGCT 345 0.0 19.13123 29 CGGGCCC 345 0.0 19.13123 37 GATTTCG 265 0.0 19.094107 41 ACGCTTC 350 0.0 18.859955 31 ATTTCGT 270 0.0 18.74051 42 CGACGAG 60 0.007409072 18.334097 28 >>END_MODULE