##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064086_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1246896 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.23497308516508 32.0 32.0 32.0 32.0 32.0 2 31.318055395157256 32.0 32.0 32.0 32.0 32.0 3 31.418402978275655 32.0 32.0 32.0 32.0 32.0 4 31.52529962402638 32.0 32.0 32.0 32.0 32.0 5 31.44030376230255 32.0 32.0 32.0 32.0 32.0 6 35.049202980842026 36.0 36.0 36.0 36.0 36.0 7 35.07147588892738 36.0 36.0 36.0 36.0 36.0 8 35.004726937932276 36.0 36.0 36.0 36.0 36.0 9 35.1438323645276 36.0 36.0 36.0 36.0 36.0 10 34.970485910613235 36.0 36.0 36.0 36.0 36.0 11 35.143416130936345 36.0 36.0 36.0 36.0 36.0 12 35.03784036519485 36.0 36.0 36.0 36.0 36.0 13 35.08729517136955 36.0 36.0 36.0 36.0 36.0 14 35.02937775083086 36.0 36.0 36.0 36.0 36.0 15 34.99393453824537 36.0 36.0 36.0 36.0 36.0 16 35.00905769206093 36.0 36.0 36.0 36.0 36.0 17 34.966377308131555 36.0 36.0 36.0 36.0 36.0 18 34.96674301625797 36.0 36.0 36.0 36.0 36.0 19 34.95920189013358 36.0 36.0 36.0 36.0 36.0 20 34.96424401072744 36.0 36.0 36.0 36.0 36.0 21 34.96002794138405 36.0 36.0 36.0 36.0 36.0 22 34.938735868909674 36.0 36.0 36.0 36.0 36.0 23 34.88970130628376 36.0 36.0 36.0 32.0 36.0 24 34.86014551333872 36.0 36.0 36.0 32.0 36.0 25 34.832698156061134 36.0 36.0 36.0 32.0 36.0 26 34.76775288396145 36.0 36.0 36.0 32.0 36.0 27 34.76119419743106 36.0 36.0 36.0 32.0 36.0 28 34.750588661764894 36.0 36.0 36.0 32.0 36.0 29 34.70921071204014 36.0 36.0 36.0 32.0 36.0 30 34.69741020903107 36.0 36.0 36.0 32.0 36.0 31 34.69630987668579 36.0 36.0 36.0 32.0 36.0 32 34.65192606279914 36.0 36.0 36.0 32.0 36.0 33 34.625398589778136 36.0 36.0 36.0 32.0 36.0 34 34.615949525862625 36.0 36.0 36.0 32.0 36.0 35 34.575496272343486 36.0 36.0 36.0 32.0 36.0 36 34.561974695564025 36.0 36.0 36.0 32.0 36.0 37 34.54637355481131 36.0 36.0 36.0 32.0 36.0 38 34.50888365990427 36.0 36.0 36.0 32.0 36.0 39 34.50552652346306 36.0 36.0 36.0 32.0 36.0 40 34.48749695243228 36.0 36.0 36.0 32.0 36.0 41 34.46350056460202 36.0 36.0 36.0 32.0 36.0 42 34.400458418344435 36.0 36.0 36.0 32.0 36.0 43 34.39337202140355 36.0 36.0 36.0 32.0 36.0 44 34.335919755937944 36.0 36.0 36.0 32.0 36.0 45 34.310243997895576 36.0 36.0 36.0 32.0 36.0 46 34.29253682744992 36.0 36.0 36.0 32.0 36.0 47 34.25796217166468 36.0 36.0 36.0 32.0 36.0 48 34.20992608846287 36.0 36.0 36.0 32.0 36.0 49 34.196556890069424 36.0 36.0 36.0 32.0 36.0 50 33.57407113343856 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 0.0 17 2.0 18 1.0 19 3.0 20 13.0 21 35.0 22 132.0 23 385.0 24 969.0 25 2285.0 26 4850.0 27 8664.0 28 14284.0 29 21959.0 30 31796.0 31 45900.0 32 66932.0 33 110342.0 34 228952.0 35 709391.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.93940001555984 17.74456026993926 11.603233560501733 26.712806153999164 2 16.308842494273744 20.258194801778508 36.32892449041133 27.10403821353642 3 18.100313580187507 24.019199769025334 28.892123603525572 28.98836304726159 4 12.512591266633304 15.58822868948172 35.597515751113164 36.30166429277181 5 14.472016912396866 36.73794767165826 33.20790186190348 15.582133554041397 6 34.843030086735446 35.357026854707094 16.31219950356686 13.487743554990598 7 30.658099245003985 30.195990998432904 20.575365668613372 18.570544087949735 8 28.593082342071835 32.69182032823908 18.91745582630789 19.797641503381197 9 27.729951430459582 13.513415972128653 17.820032850204353 40.93659974720742 10 15.648663951636316 26.410193072983418 31.747248746076224 26.193894229304043 11 37.73300879384391 20.493305370540423 22.38825241900882 19.38543341660685 12 24.954847878251275 23.079069946491128 28.678253839935326 23.28782833532227 13 29.95679647506715 18.951646858701938 25.131507295356688 25.960049370874234 14 23.978561111498742 18.825833491727035 24.80573714023577 32.38986825653845 15 25.615741026650763 26.716531751295886 21.800388344531054 25.867338877522293 16 26.198165829246484 25.221572157817278 23.200856534483936 25.379405478452306 17 24.550162964673877 25.49218218680628 24.74079634548511 25.216858503034732 18 25.437567968998113 24.490412962790682 25.47213391376318 24.59988515444802 19 26.007301330664305 24.4136640104708 24.9237306078454 24.655304051019492 20 26.29327871205857 23.63955412229958 24.57283687641803 25.49433028922382 21 27.07210545225905 23.727239481079415 24.07257702326417 25.128078043397363 22 26.348793640507758 23.692990250959987 24.51062321355819 25.447592894974065 23 25.025904491822843 23.504516845137655 24.955970383867676 26.513608279171823 24 25.364004770256948 24.24394073910111 24.82065421812457 25.57140027251737 25 25.51837635559006 23.659166844444588 24.960100218626742 25.862356581338613 26 25.219858087769996 24.442925923163358 25.15328910907447 25.183926879992175 27 25.74655745041598 24.254445097660213 24.481823001340207 25.517174450583603 28 25.3081785823705 23.92901426163058 25.167743787905767 25.59506336809315 29 25.264362598416675 24.065758416896106 24.98566406842109 25.68421491626613 30 25.167842560430138 24.40889182606129 25.030216071982824 25.39304954152575 31 25.77518447224896 24.08036573628489 24.228585178055823 25.915864613410335 32 25.462861597464997 24.404525597439335 24.13464831340733 25.997964491688343 33 25.112304354625913 24.05611007069901 24.684501156929343 26.14708441774573 34 25.918461296624823 23.896916113012765 24.83286121706548 25.35176137329693 35 26.28494160559354 23.805926218214307 24.775557277205408 25.133574898986737 36 25.415524740595302 24.4276333677415 24.420334665546996 25.736507226116203 37 26.11725906808058 24.213976706024642 24.469661850781893 25.199102375112886 38 25.41151314443925 24.15734347341717 24.70185699241499 25.729286389728596 39 25.980047367251792 24.019752127957343 24.306313575056564 25.6938869297343 40 26.13783186177836 24.226962458706502 24.571666424726935 25.063539254788203 41 25.184926161868837 24.466715696928816 24.943838427909075 25.404519713293272 42 26.24211535145583 24.59240427144444 24.51428960970739 24.651190767392343 43 25.55039334146563 23.734662730445006 24.892431595316634 25.822512332772735 44 25.270074538166526 24.319861285546782 24.548512364481528 25.861551811805167 45 25.478334305092954 24.47575105523471 24.356413092208626 25.689501547463706 46 25.287155361436408 24.21953570735416 24.618609880935384 25.874699050274042 47 25.563807262928268 24.23593288848967 24.79909854998075 25.40116129860131 48 26.128454817697268 24.61259365360956 23.98623125524308 25.272720273450094 49 25.38070658886255 24.708795950250703 24.276761740391308 25.633735720495437 50 25.500490023883653 24.7993789288126 24.096262826034305 25.603868221269444 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 55.0 1 45.5 2 36.0 3 110.0 4 184.0 5 216.0 6 248.0 7 231.5 8 215.0 9 285.0 10 355.0 11 504.0 12 653.0 13 1178.0 14 1703.0 15 2219.5 16 2736.0 17 2727.0 18 2718.0 19 2654.0 20 2590.0 21 2772.5 22 2955.0 23 3402.5 24 3850.0 25 4476.0 26 5102.0 27 6407.0 28 7712.0 29 9096.5 30 10481.0 31 12644.5 32 14808.0 33 17655.5 34 20503.0 35 24344.0 36 28185.0 37 33684.0 38 39183.0 39 44043.0 40 48903.0 41 54304.0 42 59705.0 43 63067.0 44 66429.0 45 73675.5 46 80922.0 47 86412.5 48 91903.0 49 95369.0 50 98835.0 51 98658.0 52 98481.0 53 98519.0 54 98557.0 55 98083.0 56 97609.0 57 94179.5 58 90750.0 59 83319.0 60 75888.0 61 67238.0 62 58588.0 63 51011.0 64 43434.0 65 36746.5 66 30059.0 67 25417.5 68 20776.0 69 18541.5 70 16307.0 71 12665.0 72 9023.0 73 7702.5 74 6382.0 75 5038.0 76 3694.0 77 3156.0 78 2618.0 79 2118.0 80 1618.0 81 1295.0 82 972.0 83 797.5 84 623.0 85 459.0 86 295.0 87 195.0 88 95.0 89 73.5 90 52.0 91 42.0 92 32.0 93 30.0 94 28.0 95 26.0 96 24.0 97 17.5 98 11.0 99 11.0 100 11.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007779317601467966 2 6.415932042447807E-4 3 4.811949031835855E-4 4 0.0 5 0.0 6 8.019915053059759E-5 7 1.6039830106119517E-4 8 0.0 9 0.001924779612734342 10 8.019915053059758E-4 11 8.019915053059759E-5 12 0.0 13 5.613940537141831E-4 14 2.4059745159179274E-4 15 0.0052129447844888425 16 8.821906558365735E-4 17 0.0 18 3.2079660212239034E-4 19 0.0 20 5.613940537141831E-4 21 0.0 22 3.2079660212239034E-4 23 6.415932042447807E-4 24 2.4059745159179274E-4 25 0.001764381311673147 26 0.005533741386611233 27 0.005854537988733623 28 0.004330754128652269 29 0.0023257753653873297 30 0.0034485634728156963 31 0.007699118450937368 32 0.0026465719675097202 33 0.0048921481823664525 34 0.0022455762148567322 35 0.0024059745159179277 36 0.00793971590252916 37 0.004009957526529879 38 0.00761891930040677 39 0.0034485634728156963 40 0.0023257753653873297 41 0.0037693600749380864 42 8.821906558365735E-4 43 0.0012029872579589638 44 0.0014435847095507564 45 0.0013633855590201589 46 8.019915053059758E-4 47 0.0012831864084895614 48 0.0011227881074283661 49 3.2079660212239034E-4 50 0.0014435847095507564 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1246896.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.75729746900827 #Duplication Level Percentage of deduplicated Percentage of total 1 77.25693640858734 42.303810484692725 2 12.805407892544332 14.023790583680723 3 4.136867256639203 6.795710128847792 4 1.7743231312407002 3.886285580139568 5 0.9736686586961807 2.6657732190238526 6 0.6387278682107012 2.0985007128815325 7 0.43487082358720336 1.6668645733429979 8 0.31537505003358507 1.3815268343193907 9 0.23469206356353817 1.156599282434765 >10 1.2899160866281227 12.53169888470567 >50 0.07540136437457325 2.834199546661926 >100 0.05836052674427759 6.472023475824834 >500 0.004863369782709586 1.836051830015614 >1k 5.894993676011619E-4 0.34716486342858527 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 8.019915053059759E-5 10 0.0 0.0 0.0 0.0 8.019915053059759E-5 11 0.0 0.0 0.0 0.0 8.019915053059759E-5 12 0.0 0.0 0.0 0.0 8.019915053059759E-5 13 0.0 0.0 0.0 0.0 8.019915053059759E-5 14 0.0 0.0 0.0 0.0 8.019915053059759E-5 15 0.0 0.0 0.0 0.0 1.6039830106119517E-4 16 0.0 0.0 0.0 8.019915053059759E-5 1.6039830106119517E-4 17 0.0 0.0 0.0 8.019915053059759E-5 1.6039830106119517E-4 18 0.0 0.0 0.0 2.4059745159179274E-4 1.6039830106119517E-4 19 0.0 0.0 0.0 2.4059745159179274E-4 1.6039830106119517E-4 20 0.0 0.0 0.0 2.4059745159179274E-4 1.6039830106119517E-4 21 0.0 0.0 0.0 4.811949031835855E-4 1.6039830106119517E-4 22 0.0 0.0 0.0 6.415932042447807E-4 1.6039830106119517E-4 23 0.0 0.0 0.0 9.62389806367171E-4 2.4059745159179274E-4 24 0.0 0.0 0.0 0.001523783860081354 2.4059745159179274E-4 25 0.0 0.0 0.0 0.0017643813116731467 2.4059745159179274E-4 26 0.0 0.0 0.0 0.0025663728169791227 2.4059745159179274E-4 27 0.0 0.0 0.0 0.003047567720162708 2.4059745159179274E-4 28 0.0 0.0 0.0 0.004330754128652269 2.4059745159179274E-4 29 0.0 0.0 0.0 0.009222902311018721 3.2079660212239034E-4 30 0.0 0.0 0.0 0.017724012267262064 3.2079660212239034E-4 31 0.0 0.0 0.0 0.03673121094301369 3.2079660212239034E-4 32 0.0 0.0 0.0 0.057262193478846674 3.2079660212239034E-4 33 0.0 0.0 0.0 0.07707138365990428 3.2079660212239034E-4 34 0.0 0.0 0.0 0.09567758658300292 3.2079660212239034E-4 35 0.0 0.0 0.0 0.11877494193581502 3.2079660212239034E-4 36 0.0 0.0 0.0 0.15406256816927796 3.2079660212239034E-4 37 0.0 0.0 0.0 0.21124456249759402 3.2079660212239034E-4 38 0.0 0.0 0.0 0.28398519202884603 3.2079660212239034E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATAGCG 40 7.033043E-4 27.499474 5 TTTAGCG 55 1.593864E-4 23.999542 41 GTATCAA 1960 0.0 22.113596 1 ACCGTCG 255 0.0 21.568213 8 CGTCGTA 260 0.0 21.151743 10 CCGTCGT 260 0.0 20.307304 9 TTAATAC 115 2.0210791E-7 19.130835 3 CCGCTAG 335 0.0 18.389185 36 TATGCGA 60 0.007416478 18.331512 17 TACCGTC 325 0.0 18.276573 7 GGTATAT 75 0.0012903726 17.601076 1 GTATAGA 200 3.6379788E-12 17.601074 1 CGCTAGA 350 0.0 17.600368 37 ATACCGT 325 0.0 17.599663 6 CGCAATA 340 0.0 17.471655 36 GTCGTAG 315 0.0 17.458582 11 TCGTTTA 320 0.0 17.18924 30 GTATTAC 90 2.2144073E-4 17.112158 1 CGTATTG 390 0.0 16.926147 27 AATAACG 365 0.0 16.875711 2 >>END_MODULE