##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064085_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1421954 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.264524028203443 32.0 32.0 32.0 32.0 32.0 2 31.41152667385865 32.0 32.0 32.0 32.0 32.0 3 31.482622503962858 32.0 32.0 32.0 32.0 32.0 4 31.571363068003606 32.0 32.0 32.0 32.0 32.0 5 31.51890567486712 32.0 32.0 32.0 32.0 32.0 6 35.10956824201064 36.0 36.0 36.0 36.0 36.0 7 35.12319526510703 36.0 36.0 36.0 36.0 36.0 8 35.07920228080515 36.0 36.0 36.0 36.0 36.0 9 35.17549161224625 36.0 36.0 36.0 36.0 36.0 10 35.03719881233852 36.0 36.0 36.0 36.0 36.0 11 35.18635694262965 36.0 36.0 36.0 36.0 36.0 12 35.08652670902153 36.0 36.0 36.0 36.0 36.0 13 35.13444949695982 36.0 36.0 36.0 36.0 36.0 14 35.06529887746017 36.0 36.0 36.0 36.0 36.0 15 35.04874489610775 36.0 36.0 36.0 36.0 36.0 16 35.05675500051338 36.0 36.0 36.0 36.0 36.0 17 35.01559614446037 36.0 36.0 36.0 36.0 36.0 18 35.01432465466534 36.0 36.0 36.0 36.0 36.0 19 35.01389637076868 36.0 36.0 36.0 36.0 36.0 20 35.006047312360316 36.0 36.0 36.0 36.0 36.0 21 35.004609853764606 36.0 36.0 36.0 36.0 36.0 22 34.99344985843424 36.0 36.0 36.0 36.0 36.0 23 34.94068162542529 36.0 36.0 36.0 36.0 36.0 24 34.90669037113718 36.0 36.0 36.0 32.0 36.0 25 34.87566616079001 36.0 36.0 36.0 32.0 36.0 26 34.8178154848891 36.0 36.0 36.0 32.0 36.0 27 34.81701377119091 36.0 36.0 36.0 32.0 36.0 28 34.79147075081191 36.0 36.0 36.0 32.0 36.0 29 34.76366394412196 36.0 36.0 36.0 32.0 36.0 30 34.73542252421667 36.0 36.0 36.0 32.0 36.0 31 34.73489648750944 36.0 36.0 36.0 32.0 36.0 32 34.70079271200053 36.0 36.0 36.0 32.0 36.0 33 34.668004731517335 36.0 36.0 36.0 32.0 36.0 34 34.64791828708945 36.0 36.0 36.0 32.0 36.0 35 34.60475163050282 36.0 36.0 36.0 32.0 36.0 36 34.580176995880315 36.0 36.0 36.0 32.0 36.0 37 34.573763989552404 36.0 36.0 36.0 32.0 36.0 38 34.52416533868184 36.0 36.0 36.0 32.0 36.0 39 34.51882901978545 36.0 36.0 36.0 32.0 36.0 40 34.49008266090183 36.0 36.0 36.0 32.0 36.0 41 34.47333528370116 36.0 36.0 36.0 32.0 36.0 42 34.39280665900585 36.0 36.0 36.0 32.0 36.0 43 34.393701905968825 36.0 36.0 36.0 32.0 36.0 44 34.316195179309595 36.0 36.0 36.0 32.0 36.0 45 34.27356370177938 36.0 36.0 36.0 32.0 36.0 46 34.24428849315801 36.0 36.0 36.0 32.0 36.0 47 34.201353911589266 36.0 36.0 36.0 32.0 36.0 48 34.15566537314147 36.0 36.0 36.0 32.0 36.0 49 34.1260223607796 36.0 36.0 36.0 32.0 36.0 50 33.51775514538445 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 4.0 20 13.0 21 61.0 22 159.0 23 452.0 24 1179.0 25 2603.0 26 5521.0 27 10153.0 28 16746.0 29 25468.0 30 35997.0 31 50930.0 32 73817.0 33 117627.0 34 245278.0 35 835945.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.61782135879175 17.83676156368378 11.498415413462444 26.047001664062027 2 16.019829191585604 20.556154110147798 36.87304141372656 26.55097528454004 3 18.104657761987244 24.65749474840518 28.87754764763012 28.360299841977454 4 11.942932049841275 15.819991363996303 36.30764426978651 35.929432316375916 5 13.963531872339049 37.25732337332994 33.43926737433138 15.339877379999633 6 34.11320080649755 36.09744639583221 16.72315009448286 13.066202703187383 7 30.106121874890118 30.67330074897148 20.94032842223707 18.28024895390133 8 28.398196002258864 32.74960564800665 19.31301526843714 19.53918308129734 9 27.719851976252063 13.638537372339362 18.36477642422222 40.276834227186356 10 15.61380930278352 26.765686315878305 31.838896155955947 25.781608225382225 11 37.52301410594154 20.987317451900694 22.438208268340606 19.051460173817155 12 24.684535543067238 23.851314145142837 28.985949586167177 22.478200725622756 13 29.610766630870728 19.457589547867045 25.415538813276704 25.51610500798552 14 23.64151150393685 19.597903720811168 25.430254833510084 31.33032994174189 15 25.08982705522685 27.298704057039213 22.55427424873356 25.05719463900038 16 25.618557208542143 25.734244390402395 24.042468799624174 24.604729601431284 17 23.907735411975352 25.870035176946654 25.314320997725666 24.90790841335233 18 24.79891978944333 24.84034192602386 26.50946414945726 23.85127413507555 19 25.360050578324316 24.857994603197152 25.745928311273296 24.03602650720523 20 25.77452337969491 24.105112807230128 25.215849625054236 24.904514188020723 21 27.00804667380239 23.980663228205696 24.742361567251827 24.268928530740094 22 25.86077036301481 24.227453368711906 25.321371381473227 24.590404886800055 23 24.318890195394474 24.112482629414377 25.799539222360373 25.769087952830773 24 24.696227012201554 24.973522275748092 25.591476493547592 24.73877421850276 25 24.70940863391114 24.50328005356108 25.641804648336624 25.145506664191153 26 24.59847428315431 25.38798738860769 25.873679309707015 24.13985901853098 27 25.144351749873756 24.806206457112236 25.22044850668906 24.82899328632495 28 24.39317879090074 24.71795138678883 25.961061045714313 24.92780877659612 29 24.389698435917634 24.843873073028018 25.906028468549568 24.860400022504784 30 24.291093375942747 25.126238828391145 26.14297127521612 24.43969652044999 31 25.043534402727687 24.859339571154486 24.92249610370612 25.174629922411707 32 24.637074711762562 25.02303227049661 24.882517838581407 25.45737517915942 33 24.24410786724205 24.616990272143674 25.61228106696974 25.526620793644543 34 25.135590931723495 24.642526604797443 25.753837757854853 24.468044705624212 35 25.669235962642063 24.532252166085293 25.636674355800608 24.161837515472037 36 24.307667421546427 25.41276918965299 25.256565343986047 25.022998044814535 37 25.400711297277113 25.028254269436374 25.09872291405427 24.472311519232242 38 24.49064419820726 24.878590844993653 25.615098692192184 25.0156662646069 39 25.20892804773328 24.77324370684035 25.02966099608904 24.98816724933733 40 25.355819203476965 24.976124000478222 25.5496402776508 24.118416518394014 41 24.27004822390181 25.442697106495565 25.94434664946913 24.342908020133496 42 25.622780305640923 25.51911838135492 25.287883369786137 23.57021794321802 43 24.848938773787925 24.588941868151963 25.41661392182511 25.145505436235005 44 24.46949014511222 25.303284118672174 25.055101010314125 25.172124725901483 45 24.59630884825742 25.452954799109108 25.164757187534505 24.785979165098972 46 24.42272447884507 25.146736355593564 25.165583872151952 25.264955293409418 47 24.696854829294914 24.892434627399737 25.60196522181886 24.80874532148649 48 25.422154208390975 25.61470899121126 24.45438709137491 24.508749709022858 49 24.479394859597832 25.742026272353968 24.826312580391306 24.952266287656887 50 24.682246822468223 25.807331829750545 24.720152861905976 24.790268485875252 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 42.0 1 36.0 2 30.0 3 116.0 4 202.0 5 231.0 6 260.0 7 246.5 8 233.0 9 342.5 10 452.0 11 721.5 12 991.0 13 1770.0 14 2549.0 15 3488.0 16 4427.0 17 4922.0 18 5417.0 19 5532.0 20 5647.0 21 6204.0 22 6761.0 23 7393.5 24 8026.0 25 8735.0 26 9444.0 27 11478.5 28 13513.0 29 15686.5 30 17860.0 31 20379.0 32 22898.0 33 26593.0 34 30288.0 35 34782.5 36 39277.0 37 45994.0 38 52711.0 39 57347.5 40 61984.0 41 67752.0 42 73520.0 43 75511.5 44 77503.0 45 85416.0 46 93329.0 47 99433.5 48 105538.0 49 108927.5 50 112317.0 51 107204.0 52 102091.0 53 100540.0 54 98989.0 55 99622.5 56 100256.0 57 97591.5 58 94927.0 59 86535.0 60 78143.0 61 68781.5 62 59420.0 63 51443.0 64 43466.0 65 37076.5 66 30687.0 67 26279.5 68 21872.0 69 19988.5 70 18105.0 71 13959.0 72 9813.0 73 8399.5 74 6986.0 75 5496.5 76 4007.0 77 3556.0 78 3105.0 79 2568.0 80 2031.0 81 1621.5 82 1212.0 83 1014.5 84 817.0 85 595.0 86 373.0 87 274.5 88 176.0 89 135.5 90 95.0 91 77.5 92 60.0 93 48.0 94 36.0 95 35.0 96 34.0 97 27.5 98 21.0 99 17.0 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009283000715916267 2 7.032576299936566E-4 3 3.516288149968283E-4 4 0.0 5 0.0 6 2.10977288998097E-4 7 2.8130305199746265E-4 8 7.032576299936566E-5 9 0.0014065152599873133 10 9.845606819911192E-4 11 0.0 12 2.10977288998097E-4 13 3.516288149968283E-4 14 4.21954577996194E-4 15 0.003867916964965111 16 0.0011252122079898506 17 0.0 18 6.32931866994291E-4 19 7.032576299936566E-5 20 0.0010548864449904849 21 0.0 22 7.032576299936566E-5 23 7.032576299936566E-4 24 2.8130305199746265E-4 25 0.0018284698379835071 26 0.004571174594958768 27 0.005626061039949253 28 0.002531727467977164 29 0.002391075941978432 30 0.003234985097970821 31 0.006329318669942911 32 0.002531727467977164 33 0.0040788942539632085 34 0.0021097728899809698 35 0.002391075941978432 36 0.006610621721940373 37 0.0031646593349714553 38 0.007665508166930857 39 0.00372726543896638 40 0.001687818311984776 41 0.0031646593349714553 42 0.001687818311984776 43 9.845606819911192E-4 44 0.0014065152599873133 45 9.142349189917536E-4 46 0.0011252122079898506 47 0.0019691213639822383 48 0.001476841022986679 49 2.10977288998097E-4 50 0.001195537970989216 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1421954.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.50808030520037 #Duplication Level Percentage of deduplicated Percentage of total 1 78.72989615050983 45.276051902436045 2 13.291756874176288 15.28766843434658 3 3.8364609631237645 6.618825154652634 4 1.5548012700709104 3.576545451914617 5 0.7704429486722645 2.215334748140998 6 0.42690959923874 1.4730450909649422 7 0.2726639382164602 1.0976265758699069 8 0.18267110787380283 0.8404051792837258 9 0.13215285965118587 0.6839871538844043 >10 0.6615280177446983 6.7722542979839515 >50 0.062118885275431794 2.5238272900742422 >100 0.06738685806240972 8.212040205143396 >500 0.008130712168850774 3.18224734550743 >1k 0.003079815215473778 2.2401411697970732 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1691 0.11892086523192734 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1648 0.11589685742295461 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1641 0.11540457708195904 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1574 0.11069275096100156 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1534 0.10787972044102694 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 1.4065152599873133E-4 6 0.0 0.0 0.0 0.0 2.10977288998097E-4 7 0.0 0.0 0.0 0.0 2.10977288998097E-4 8 0.0 0.0 0.0 0.0 2.10977288998097E-4 9 0.0 0.0 0.0 0.0 2.10977288998097E-4 10 0.0 0.0 0.0 2.8130305199746265E-4 2.10977288998097E-4 11 0.0 0.0 0.0 3.516288149968283E-4 2.10977288998097E-4 12 0.0 0.0 0.0 3.516288149968283E-4 5.626061039949253E-4 13 0.0 0.0 0.0 3.516288149968283E-4 7.032576299936566E-4 14 0.0 0.0 0.0 4.21954577996194E-4 7.032576299936566E-4 15 0.0 0.0 0.0 4.922803409955596E-4 0.0010548864449904849 16 2.8130305199746265E-4 0.0 0.0 6.329318669942909E-4 0.0010548864449904849 17 2.8130305199746265E-4 0.0 0.0 6.329318669942909E-4 0.0010548864449904849 18 2.8130305199746265E-4 0.0 0.0 9.142349189917536E-4 0.0011955379709892163 19 2.8130305199746265E-4 0.0 0.0 9.845606819911192E-4 0.0012658637339885818 20 2.8130305199746265E-4 0.0 0.0 0.0010548864449904849 0.0015471667859860445 21 2.8130305199746265E-4 0.0 0.0 0.0013361894969879475 0.0017581440749841416 22 2.8130305199746265E-4 0.0 0.0 0.001476841022986679 0.0018987956009828728 23 2.8130305199746265E-4 0.0 0.0 0.0023910759419784326 0.0018987956009828728 24 3.516288149968283E-4 0.0 0.0 0.0035162881499682832 0.0018987956009828728 25 3.516288149968283E-4 0.0 0.0 0.004149220016962574 0.0018987956009828728 26 3.516288149968283E-4 0.0 0.0 0.004711826120957499 0.0020394471269816043 27 3.516288149968283E-4 0.0 0.0 0.005485409513950522 0.0020394471269816043 28 3.516288149968283E-4 0.0 0.0 0.008720394611921343 0.0020394471269816043 29 3.516288149968283E-4 0.0 0.0 0.016315577015852834 0.0020394471269816043 30 3.516288149968283E-4 0.0 0.0 0.02981812351173104 0.0020394471269816043 31 3.516288149968283E-4 0.0 0.0 0.056190284636493164 0.0023207501789790667 32 3.516288149968283E-4 0.0 0.0 0.08804785527520581 0.002461401704977798 33 3.516288149968283E-4 0.0 0.0 0.1169517438679451 0.002461401704977798 34 3.516288149968283E-4 0.0 0.0 0.1500751782406463 0.002742704756975261 35 3.516288149968283E-4 0.0 0.0 0.1875588099193082 0.002742704756975261 36 3.516288149968283E-4 0.0 0.0 0.24114704132482484 0.002742704756975261 37 3.516288149968283E-4 0.0 0.0 0.318294403335129 0.002742704756975261 38 3.516288149968283E-4 0.0 0.0 0.42596314648715783 0.0028130305199746265 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTACT 65 4.9331225E-4 20.307467 4 TACCGTC 395 0.0 20.05041 7 ATACCGT 410 0.0 19.316856 6 CGTCGTA 415 0.0 19.084126 10 ACCGTCG 405 0.0 19.012133 8 ATACGAA 410 0.0 18.779617 40 GTATAAG 235 0.0 18.72583 1 AATCACG 130 3.5861376E-8 18.616486 34 ATAACGC 500 0.0 18.480442 3 GTATCAA 3865 0.0 18.217106 1 CCTATAC 170 1.2732926E-10 18.118082 3 ATCGTTT 465 0.0 17.97766 29 CATCGTT 475 0.0 17.599804 28 TAATAGT 125 4.854537E-7 17.599802 4 CGTTTAT 490 0.0 17.510624 31 GCATCGT 480 0.0 17.417086 27 CCGTCGT 445 0.0 17.303785 9 TGGCGAG 345 0.0 17.216593 18 TATACTG 205 5.456968E-12 17.17054 5 TAACGCC 475 0.0 17.13665 4 >>END_MODULE