FastQCFastQC Report
Thu 2 Feb 2017
SRR4064083_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4064083_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2282781
Sequences flagged as poor quality0
Sequence length50
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACCG856.1177216E-620.7057385
TTAGGAC15500.020.2957423
GATATAC11500.019.5133341
GTATCAA51450.018.8574261
TAGGACG22700.018.7047164
TGTAGGA28100.018.4759312
GACGTGA13600.018.4410487
GTAGGAC26850.018.2709543
CTGTAGG27400.018.226551
ACTGTTC12600.018.1586028
AGGACGT23200.018.0171155
CTTTAGG17900.017.8214951
AAATTTA12750.017.77203644
GGACGTG23650.017.7673176
ATACACT13200.017.6665444
GTCCTAC22950.017.1592981
TAGGACC17100.017.1109924
AATCCCG7900.016.98647919
GTCCTAT7250.016.6899051
TAGGACA9100.016.6812044
Produced by FastQC (version 0.11.5)