##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064083_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2282781 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.316219558512184 32.0 32.0 32.0 32.0 32.0 2 31.432562738168926 32.0 32.0 32.0 32.0 32.0 3 31.50092672052203 32.0 32.0 32.0 32.0 32.0 4 31.58035615330599 32.0 32.0 32.0 32.0 32.0 5 31.536855265573 32.0 32.0 32.0 32.0 32.0 6 35.12611284218679 36.0 36.0 36.0 36.0 36.0 7 35.14521191476537 36.0 36.0 36.0 36.0 36.0 8 35.101395184207334 36.0 36.0 36.0 36.0 36.0 9 35.19973444671215 36.0 36.0 36.0 36.0 36.0 10 35.070230565262285 36.0 36.0 36.0 36.0 36.0 11 35.207034752786186 36.0 36.0 36.0 36.0 36.0 12 35.12129941505558 36.0 36.0 36.0 36.0 36.0 13 35.15641754509083 36.0 36.0 36.0 36.0 36.0 14 35.0997279195858 36.0 36.0 36.0 36.0 36.0 15 35.079213906195996 36.0 36.0 36.0 36.0 36.0 16 35.08910885450685 36.0 36.0 36.0 36.0 36.0 17 35.05495489930922 36.0 36.0 36.0 36.0 36.0 18 35.05948665246469 36.0 36.0 36.0 36.0 36.0 19 35.043869298018514 36.0 36.0 36.0 36.0 36.0 20 35.04081907112421 36.0 36.0 36.0 36.0 36.0 21 35.03738992045229 36.0 36.0 36.0 36.0 36.0 22 35.01797062442696 36.0 36.0 36.0 36.0 36.0 23 34.97120135483868 36.0 36.0 36.0 36.0 36.0 24 34.94473845717132 36.0 36.0 36.0 36.0 36.0 25 34.924411934390555 36.0 36.0 36.0 36.0 36.0 26 34.870852701157055 36.0 36.0 36.0 32.0 36.0 27 34.850516102946365 36.0 36.0 36.0 32.0 36.0 28 34.82266191982499 36.0 36.0 36.0 32.0 36.0 29 34.796982715380935 36.0 36.0 36.0 32.0 36.0 30 34.780302622108735 36.0 36.0 36.0 32.0 36.0 31 34.7735696065457 36.0 36.0 36.0 32.0 36.0 32 34.722506013498446 36.0 36.0 36.0 32.0 36.0 33 34.70595252019357 36.0 36.0 36.0 32.0 36.0 34 34.695297534016625 36.0 36.0 36.0 32.0 36.0 35 34.65462389953307 36.0 36.0 36.0 32.0 36.0 36 34.61849209363491 36.0 36.0 36.0 32.0 36.0 37 34.593788015582746 36.0 36.0 36.0 32.0 36.0 38 34.55175945480534 36.0 36.0 36.0 32.0 36.0 39 34.52270980002024 36.0 36.0 36.0 32.0 36.0 40 34.510143110530535 36.0 36.0 36.0 32.0 36.0 41 34.49738761624527 36.0 36.0 36.0 32.0 36.0 42 34.43773581434224 36.0 36.0 36.0 32.0 36.0 43 34.42376075497387 36.0 36.0 36.0 32.0 36.0 44 34.34819371634861 36.0 36.0 36.0 32.0 36.0 45 34.31104823458755 36.0 36.0 36.0 32.0 36.0 46 34.25162860563497 36.0 36.0 36.0 32.0 36.0 47 34.227264901889406 36.0 36.0 36.0 32.0 36.0 48 34.16843797105373 36.0 36.0 36.0 32.0 36.0 49 34.14108931167729 36.0 36.0 36.0 32.0 36.0 50 33.559272659094326 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 2.0 18 1.0 19 4.0 20 21.0 21 63.0 22 217.0 23 637.0 24 1694.0 25 3992.0 26 8192.0 27 15322.0 28 25249.0 29 39379.0 30 56710.0 31 80581.0 32 116561.0 33 186373.0 34 387959.0 35 1359823.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.330301652266186 18.390124780838374 12.16321834850488 26.116355218390563 2 14.988619099936393 20.703907354742395 39.10184635171625 25.20562719360497 3 18.247245016147033 25.140180447280763 29.221797008198802 27.3907775283734 4 11.96321504340539 16.58976485260741 36.73580601906184 34.71121408492536 5 13.458233619431736 37.8985982448601 33.971852753286456 14.671315382421705 6 33.15033952127522 36.627689218332264 17.232550060825144 12.989421199567369 7 29.16857041351791 30.961954705207994 21.349241428977574 18.520233452296523 8 27.037384242020696 34.94515459220774 19.45487519603291 18.562585969738652 9 27.556989301952513 13.922750293176703 18.713194112547438 39.80706629232335 10 15.551168081108798 27.701147864362497 32.49433471134297 24.25334934318573 11 36.51955072324096 20.881118636049028 23.869448654710485 18.729881985999526 12 24.983780719711124 23.63546680205732 30.1627360009322 21.218016477299358 13 30.00792455855302 20.297076762206736 25.482427762326328 24.21257091691392 14 22.89073605589688 20.54657160692578 25.97991479668386 30.582777540493478 15 24.20877168772739 29.21003116943424 22.609733712711126 23.97146343012724 16 24.1375231792083 26.08867260071922 25.86543377153153 23.908370448540953 17 22.97452098996794 26.734934275342226 26.354959148512275 23.93558558617756 18 23.428603219410736 25.51912625756863 28.385677450895358 22.66659307212528 19 25.53285905781547 24.721874206011968 26.03290724467535 23.71235949149721 20 25.65809446000793 25.15515175675113 25.988702297433157 23.19805148580778 21 26.009634739381482 24.483995617626046 25.100699541480324 24.405670101512147 22 25.423607046858738 25.609608651922045 25.574344569944664 23.392439731274553 23 23.757942670401903 25.448348822590148 26.334291966102512 24.459416540905437 24 24.7328464978951 25.275608142738864 26.45864454150002 23.532900817866015 25 24.449007181272705 25.414818926177844 26.422729146469838 23.713444746079606 26 23.344745482782113 26.27961737538086 27.04083621922717 23.334800922609855 27 24.060889199251044 25.900515105767973 26.18956663299218 23.849029061988805 28 23.45949431635981 25.992249501903892 26.285543559972176 24.262712621764127 29 23.958666907899033 25.31270767412428 25.87944310369677 24.84918231427992 30 23.547857445757124 25.692733504592812 26.512246922060577 24.24716212758948 31 24.7112523525639 25.146498578823596 25.856736306062867 24.285512762549637 32 23.864541885028913 26.137845624920875 25.783793232000697 24.213819258049522 33 23.52044396975833 25.787693226990406 26.572648441873977 24.119214361377296 34 24.244684966156647 25.80155367076952 26.596831941501442 23.356929421572396 35 24.234949122189104 25.973398448520275 26.51306071167605 23.278591717614567 36 23.439229097064693 26.061257623907945 26.45321914885601 24.046294130171354 37 24.045973748562005 25.946359871274904 25.601153724502712 24.40651265566037 38 24.09898562775509 26.35887065330059 25.66154997340745 23.880593745536878 39 24.803410730729432 25.214682053272515 25.76609578749171 24.215811428506342 40 25.342264720931375 25.511184823825445 26.05632013513608 23.0902303201071 41 24.262105775936693 25.392997452153406 26.769561819449848 23.575334952460057 42 24.628165499646038 26.50950438421263 26.02153731311899 22.84079280302234 43 23.629711369931606 26.030500944256246 26.44031384966109 23.89947383615106 44 23.311329239161243 26.376351052696368 25.876297827583052 24.43602188055934 45 23.5940526093758 26.428091743770338 25.886245049280493 24.091610597573364 46 23.710080652403516 25.454504833843604 25.912196600692404 24.923217913060466 47 24.6279909231888 25.612859984054246 25.90255570060541 23.856593392151538 48 24.232108374833096 26.088645945406054 25.305159054190923 24.374086625569927 49 24.210685863202343 25.964561522323947 25.456276204423308 24.36847641005041 50 23.88718114510682 26.917488157866494 25.08582890991918 24.109501787107508 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 45.0 1 48.0 2 51.0 3 159.0 4 267.0 5 301.5 6 336.0 7 349.5 8 363.0 9 542.5 10 722.0 11 1096.0 12 1470.0 13 2697.0 14 3924.0 15 5440.0 16 6956.0 17 7671.0 18 8386.0 19 8480.5 20 8575.0 21 9356.5 22 10138.0 23 11459.0 24 12780.0 25 14422.0 26 16064.0 27 21547.5 28 27031.0 29 33284.0 30 39537.0 31 46925.5 32 54314.0 33 65600.5 34 76887.0 35 90070.5 36 103254.0 37 109730.5 38 116207.0 39 116502.0 40 116797.0 41 119022.0 42 121247.0 43 121523.0 44 121799.0 45 129877.5 46 137956.0 47 145750.5 48 153545.0 49 158004.5 50 162464.0 51 159317.5 52 156171.0 53 154077.0 54 151983.0 55 150184.0 56 148385.0 57 143682.5 58 138980.0 59 125993.0 60 113006.0 61 99125.5 62 85245.0 63 72892.5 64 60540.0 65 50946.5 66 41353.0 67 34972.0 68 28591.0 69 25230.5 70 21870.0 71 17130.5 72 12391.0 73 10508.0 74 8625.0 75 6869.5 76 5114.0 77 4422.5 78 3731.0 79 3052.0 80 2373.0 81 1935.0 82 1497.0 83 1199.0 84 901.0 85 675.0 86 449.0 87 310.0 88 171.0 89 134.0 90 97.0 91 82.5 92 68.0 93 49.0 94 30.0 95 37.5 96 45.0 97 32.5 98 20.0 99 25.0 100 30.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009593561537440516 2 3.942559535934459E-4 3 3.942559535934459E-4 4 0.0 5 0.0 6 3.5044973652750746E-4 7 8.761243413187686E-5 8 4.380621706593843E-5 9 0.001226574077846276 10 8.761243413187688E-4 11 4.380621706593843E-5 12 1.7522486826375373E-4 13 1.7522486826375373E-4 14 2.628373023956306E-4 15 0.0042053968383300895 16 0.0010513492095825224 17 0.0 18 1.314186511978153E-4 19 4.380621706593843E-5 20 7.008994730550149E-4 21 0.0 22 2.190310853296922E-4 23 7.008994730550149E-4 24 4.818683877253227E-4 25 0.0016646362485056604 26 0.005519583350308242 27 0.006264289040429195 28 0.0038987533188685206 29 0.002540760589824429 30 0.0037235284506047664 31 0.007228025815879841 32 0.0029788227604838134 33 0.004512040357791658 34 0.002540760589824429 35 0.0024969543727584908 36 0.006965188513484211 37 0.003811140884736644 38 0.008191762591330486 39 0.004512040357791658 40 0.0019712797679672296 41 0.0030226289775497515 42 0.0019712797679672296 43 0.0014017989461100298 44 0.0010513492095825224 45 0.0014017989461100298 46 9.637367754506454E-4 47 0.0017960548997034756 48 0.0016208300314397219 49 3.5044973652750746E-4 50 0.001839861116769414 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2282781.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.63644304502768 #Duplication Level Percentage of deduplicated Percentage of total 1 73.5920475338482 38.73623618582371 2 14.723931201467119 15.500307321698603 3 5.092354645477072 8.041303057852083 4 2.3490987277031294 4.945928055515711 5 1.2710285081250585 3.345120983826557 6 0.7097088647953654 2.24139301442115 7 0.4451533845598511 1.6401903540880138 8 0.32474319002747476 1.367466114091342 9 0.23401087922878572 1.1085750284798548 >10 1.116027014132882 10.336108824856126 >50 0.07497973920866147 2.7455092840150597 >100 0.058115984347874856 6.203445086163344 >500 0.006537385829692096 2.2980902505086074 >1k 0.002262941248739338 1.4903264386599784 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 4.380621706593843E-5 0.0 8 0.0 0.0 0.0 4.380621706593843E-5 0.0 9 0.0 0.0 0.0 8.761243413187686E-5 0.0 10 0.0 0.0 0.0 8.761243413187686E-5 0.0 11 0.0 0.0 0.0 8.761243413187686E-5 0.0 12 0.0 0.0 0.0 8.761243413187686E-5 4.380621706593843E-5 13 0.0 0.0 0.0 8.761243413187686E-5 1.314186511978153E-4 14 0.0 0.0 0.0 8.761243413187686E-5 1.314186511978153E-4 15 0.0 0.0 0.0 8.761243413187686E-5 3.06643519461569E-4 16 0.0 0.0 0.0 8.761243413187686E-5 4.380621706593843E-4 17 0.0 0.0 0.0 2.1903108532969216E-4 4.8186838772532276E-4 18 0.0 0.0 0.0 2.628373023956306E-4 4.8186838772532276E-4 19 0.0 0.0 0.0 2.628373023956306E-4 4.8186838772532276E-4 20 0.0 0.0 0.0 3.5044973652750746E-4 5.694808218571996E-4 21 0.0 0.0 0.0 4.380621706593843E-4 5.694808218571996E-4 22 0.0 0.0 0.0 6.13287038923138E-4 5.694808218571996E-4 23 0.0 0.0 0.0 0.001226574077846276 5.694808218571996E-4 24 0.0 0.0 0.0 0.0019712797679672296 6.570932559890765E-4 25 0.0 0.0 0.0 0.002321729504494737 6.570932559890765E-4 26 0.0 0.0 0.0 0.0025845668068903674 7.447056901209534E-4 27 0.0 0.0 0.0 0.0031102414116816286 7.447056901209534E-4 28 0.0 0.0 0.0 0.005169133613780735 7.447056901209534E-4 29 0.0 0.0 0.0 0.009330724235044887 7.447056901209534E-4 30 0.0 0.0 0.0 0.016295912748529096 7.447056901209534E-4 31 0.0 0.0 0.0 0.03811140884736643 7.447056901209534E-4 32 0.0 0.0 0.0 0.06356282096267667 7.447056901209534E-4 33 0.0 0.0 0.0 0.08691153465882184 7.447056901209534E-4 34 0.0 0.0 0.0 0.11122398513041767 7.447056901209534E-4 35 0.0 0.0 0.0 0.14057415056459643 7.447056901209534E-4 36 0.0 0.0 0.0 0.1846432049329305 7.885119071868918E-4 37 0.0 0.0 0.0 0.2520171667803438 7.885119071868918E-4 38 0.0 0.0 0.0 0.339410569826891 8.323181242528302E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACCG 85 6.1177216E-6 20.705738 5 TTAGGAC 1550 0.0 20.295742 3 GATATAC 1150 0.0 19.513334 1 GTATCAA 5145 0.0 18.857426 1 TAGGACG 2270 0.0 18.704716 4 TGTAGGA 2810 0.0 18.475931 2 GACGTGA 1360 0.0 18.441048 7 GTAGGAC 2685 0.0 18.270954 3 CTGTAGG 2740 0.0 18.22655 1 ACTGTTC 1260 0.0 18.158602 8 AGGACGT 2320 0.0 18.017115 5 CTTTAGG 1790 0.0 17.821495 1 AAATTTA 1275 0.0 17.772036 44 GGACGTG 2365 0.0 17.767317 6 ATACACT 1320 0.0 17.666544 4 GTCCTAC 2295 0.0 17.159298 1 TAGGACC 1710 0.0 17.110992 4 AATCCCG 790 0.0 16.986479 19 GTCCTAT 725 0.0 16.689905 1 TAGGACA 910 0.0 16.681204 4 >>END_MODULE