FastQCFastQC Report
Thu 2 Feb 2017
SRR4064082_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4064082_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1199201
Sequences flagged as poor quality0
Sequence length50
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGACGT808.991179E-519.2492524
CGAACGT1851.8189894E-1219.0262894
TCTATAC1404.083631E-918.8564113
GTATCAA22750.018.7604941
GTATAGG1002.4829254E-517.600051
ATACCGT3000.017.5993166
ACCGTCG3050.017.3108028
CTATTAC1154.2727097E-617.2174421
CGTCGTA3500.016.9700610
CCCTAAG1451.2491546E-716.6897031
TATAGGG953.3483404E-416.209222
TACCGTC3300.015.9993797
GAACGTC2201.8189894E-1115.9993785
GTCCTAC2650.015.7736291
AACGCAG27400.015.6563266
TCTAGCC1552.6683483E-715.6122973
TAGGACG1552.6683483E-715.6122974
ATAGCAC1004.945111E-415.3994023
TATATAG1004.945111E-415.3994025
AATTCCG3000.015.39940142
Produced by FastQC (version 0.11.5)