##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064082_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1199201 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.319973048721607 32.0 32.0 32.0 32.0 32.0 2 31.448870539634306 32.0 32.0 32.0 32.0 32.0 3 31.5005441122881 32.0 32.0 32.0 32.0 32.0 4 31.578094080975582 32.0 32.0 32.0 32.0 32.0 5 31.53210179110925 32.0 32.0 32.0 32.0 32.0 6 35.12008662434404 36.0 36.0 36.0 36.0 36.0 7 35.137208024342875 36.0 36.0 36.0 36.0 36.0 8 35.090410198123585 36.0 36.0 36.0 36.0 36.0 9 35.182656618865394 36.0 36.0 36.0 36.0 36.0 10 35.05142757552737 36.0 36.0 36.0 36.0 36.0 11 35.18268080163376 36.0 36.0 36.0 36.0 36.0 12 35.09531429676927 36.0 36.0 36.0 36.0 36.0 13 35.12793351573256 36.0 36.0 36.0 36.0 36.0 14 35.07908682531119 36.0 36.0 36.0 36.0 36.0 15 35.055676237761645 36.0 36.0 36.0 36.0 36.0 16 35.06718056439246 36.0 36.0 36.0 36.0 36.0 17 35.02530351459013 36.0 36.0 36.0 36.0 36.0 18 35.02273430392403 36.0 36.0 36.0 36.0 36.0 19 35.019522165174976 36.0 36.0 36.0 36.0 36.0 20 35.01297947550077 36.0 36.0 36.0 36.0 36.0 21 35.01238074351172 36.0 36.0 36.0 36.0 36.0 22 34.99892011430944 36.0 36.0 36.0 36.0 36.0 23 34.948122124647995 36.0 36.0 36.0 36.0 36.0 24 34.911593636096036 36.0 36.0 36.0 32.0 36.0 25 34.88779612425273 36.0 36.0 36.0 32.0 36.0 26 34.834082860171065 36.0 36.0 36.0 32.0 36.0 27 34.82267192905943 36.0 36.0 36.0 32.0 36.0 28 34.80043462271963 36.0 36.0 36.0 32.0 36.0 29 34.773635945934004 36.0 36.0 36.0 32.0 36.0 30 34.757956339262556 36.0 36.0 36.0 32.0 36.0 31 34.74610678276619 36.0 36.0 36.0 32.0 36.0 32 34.711450374040716 36.0 36.0 36.0 32.0 36.0 33 34.681668043972614 36.0 36.0 36.0 32.0 36.0 34 34.66881782119928 36.0 36.0 36.0 32.0 36.0 35 34.63018209624575 36.0 36.0 36.0 32.0 36.0 36 34.60512958211342 36.0 36.0 36.0 32.0 36.0 37 34.590985164288554 36.0 36.0 36.0 32.0 36.0 38 34.554671818986144 36.0 36.0 36.0 32.0 36.0 39 34.551025224295174 36.0 36.0 36.0 32.0 36.0 40 34.52522804767508 36.0 36.0 36.0 32.0 36.0 41 34.51214767165805 36.0 36.0 36.0 32.0 36.0 42 34.43485787620257 36.0 36.0 36.0 32.0 36.0 43 34.42483787121592 36.0 36.0 36.0 32.0 36.0 44 34.362734020401916 36.0 36.0 36.0 32.0 36.0 45 34.32864048645723 36.0 36.0 36.0 32.0 36.0 46 34.30350625124562 36.0 36.0 36.0 32.0 36.0 47 34.266093006927115 36.0 36.0 36.0 32.0 36.0 48 34.22528917170683 36.0 36.0 36.0 32.0 36.0 49 34.201962806902266 36.0 36.0 36.0 32.0 36.0 50 33.60071580994345 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 3.0 19 1.0 20 13.0 21 38.0 22 130.0 23 384.0 24 1094.0 25 2395.0 26 4788.0 27 8539.0 28 13957.0 29 21332.0 30 30188.0 31 42087.0 32 59827.0 33 95296.0 34 199046.0 35 720083.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.15371374530267 17.56612953532941 11.516438353879538 26.76371836548838 2 16.35747313823023 20.417446703830485 36.206872110040486 27.0182080478988 3 18.16529199907605 24.26252857115458 28.704410193804364 28.867769235965007 4 12.571287048626544 15.6957841095863 35.45210519337459 36.28082364841257 5 14.452623038172918 36.629555845934085 33.19952201507504 15.718299100817962 6 34.44927359785457 35.276576511968834 16.594173772804822 13.679976117371776 7 30.44085186720158 30.329110799607406 20.760573081576815 18.469464251614202 8 28.553511879993426 32.32385563387623 19.346298076802803 19.776334409327546 9 27.901185975106362 13.63729609016813 18.138364318343672 40.32315361638184 10 15.926110001100746 26.562223771418658 31.54242704229862 25.969239185181976 11 37.42333437013478 20.74314481058638 22.499230737799586 19.334290081479253 12 25.153039653969024 23.201153436585585 28.544803656440678 23.101003253004716 13 29.859355299234817 19.134133649990996 25.002334905503037 26.004176145271153 14 24.02553704597819 18.986173270658163 25.09683547101023 31.891454212353416 15 25.571944887812574 26.60450617685468 22.062720884890513 25.760828050442232 16 26.0313611164851 25.320632559256566 23.432277733674006 25.215728590584323 17 24.454636424282857 25.36465977318212 24.921531020680455 25.259172781854573 18 25.12568848269047 24.51786406714504 25.848756874403243 24.50769057576124 19 25.93153769179453 24.361157438292196 25.333805870580388 24.373498999332888 20 26.164516185522046 23.752552766911638 24.82911367599269 25.25381737157362 21 26.95069467086835 23.769076243265307 24.385236503305116 24.894992582561223 22 26.260384023322253 23.7275245622491 24.703843735563268 25.308247678865374 23 24.902955409104973 23.689220482808825 25.236597005814755 26.171227102271448 24 25.294405094071205 24.318002531692017 25.074007795209795 25.313584579026983 25 25.37734244181004 23.86438687899024 25.162778441196288 25.59549223800343 26 25.195222592115705 24.55935233800111 25.33974234954267 24.90568272034051 27 25.620701042757737 24.265633026666045 24.721130688300164 25.392535242276054 28 25.110662272420992 24.065249878246483 25.324898427544984 25.499189421787545 29 25.08291116809473 24.335730814935268 25.207580211395335 25.373777805574665 30 24.945273689925106 24.554579956285664 25.348809864328786 25.15133648946044 31 25.509730092609967 24.30642598916701 24.595972863320032 25.58787105490299 32 25.33052358404814 24.404206951877903 24.446069658877313 25.819199805196646 33 25.039152733186004 24.05453863153067 25.01071592377934 25.895592711503983 34 25.665104200978504 24.064084164670152 25.071194898484205 25.199616735867135 35 26.017694096769645 24.05122932193199 25.105970277453242 24.825106303845118 36 25.196668498597695 24.571032083255844 24.760174097384784 25.472125320761673 37 25.775333107620156 24.40779477668572 24.594842064708523 25.222030050985605 38 25.094821432145547 24.348509210271736 25.056625991580322 25.50004336600239 39 25.655195993812256 24.24969457405068 24.550075261957478 25.545034170179587 40 25.89875562686485 24.317229255861193 25.01588614677966 24.768128970494296 41 25.008902057355105 24.575098756547288 25.282176455038147 25.133822731059464 42 26.013674378344483 24.705944160036424 24.65982919952601 24.620552262093085 43 25.313337547302922 24.079500594569982 24.990034907011925 25.61712695111517 44 25.070610456268216 24.543752631995897 24.626058531419257 25.759578380316633 45 25.134362311673865 24.69539678264285 24.67996961264461 25.49027129303868 46 24.934914400553705 24.510044279888927 24.820337060849408 25.734704258707964 47 25.21229142987232 24.407322688810744 25.13590570866519 25.244480172651745 48 25.76992387278942 24.896074557800894 24.256552619004534 25.077448950405152 49 25.051096692203203 24.89157327778505 24.437686218361122 25.619643811650626 50 25.106780766286462 25.06758751353001 24.470599223139697 25.35503249704383 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 117.0 1 88.5 2 60.0 3 170.5 4 281.0 5 306.0 6 331.0 7 299.5 8 268.0 9 370.5 10 473.0 11 732.0 12 991.0 13 1653.5 14 2316.0 15 3004.5 16 3693.0 17 3797.0 18 3901.0 19 3836.0 20 3771.0 21 4009.0 22 4247.0 23 4620.5 24 4994.0 25 5436.0 26 5878.0 27 7090.0 28 8302.0 29 9891.5 30 11481.0 31 13380.0 32 15279.0 33 18033.5 34 20788.0 35 24372.0 36 27956.0 37 33132.5 38 38309.0 39 42199.5 40 46090.0 41 51523.5 42 56957.0 43 59753.0 44 62549.0 45 69200.5 46 75852.0 47 81694.5 48 87537.0 49 91224.0 50 94911.0 51 93839.5 52 92768.0 53 92405.0 54 92042.0 55 92301.0 56 92560.0 57 89260.5 58 85961.0 59 79051.5 60 72142.0 61 63668.5 62 55195.0 63 48181.5 64 41168.0 65 34855.5 66 28543.0 67 24406.0 68 20269.0 69 17970.0 70 15671.0 71 12325.5 72 8980.0 73 7604.5 74 6229.0 75 4950.0 76 3671.0 77 3178.5 78 2686.0 79 2241.5 80 1797.0 81 1405.0 82 1013.0 83 831.0 84 649.0 85 458.5 86 268.0 87 192.0 88 116.0 89 90.0 90 64.0 91 45.0 92 26.0 93 20.0 94 14.0 95 18.0 96 22.0 97 15.0 98 8.0 99 7.5 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009589718487559634 2 5.003331384813723E-4 3 1.6677771282712408E-4 4 0.0 5 0.0 6 2.501665692406861E-4 7 0.0 8 0.0 9 0.0015843882718576787 10 0.0010840551333763063 11 0.0 12 1.6677771282712408E-4 13 7.504997077220583E-4 14 1.6677771282712408E-4 15 0.003919276251437415 16 7.504997077220583E-4 17 8.338885641356204E-5 18 5.003331384813723E-4 19 8.338885641356204E-5 20 0.0010006662769627445 21 0.0 22 2.501665692406861E-4 23 8.338885641356203E-4 24 2.501665692406861E-4 25 0.0020847214103390504 26 0.004753164815573036 27 0.006087386518190028 28 0.004753164815573036 29 0.0021681102667526126 30 0.004336220533505225 31 0.0071714416515663345 32 0.0035857208257831672 33 0.0042528316770916634 34 0.002334887979579737 35 0.003669109682196729 36 0.008505663354183327 37 0.0032521654001289187 38 0.008755829923424014 39 0.004669775959159474 40 0.0035857208257831672 41 0.0033355542565424814 42 0.002001332553925489 43 0.0012508328462034304 44 0.0013342217026169926 45 0.0015009994154441166 46 9.172774205491823E-4 47 0.002001332553925489 48 0.002001332553925489 49 3.3355542565424815E-4 50 0.0012508328462034304 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1199201.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.334859437092945 #Duplication Level Percentage of deduplicated Percentage of total 1 79.54827134593249 47.199854987746335 2 12.325133293751648 14.626201030563768 3 3.489817494350811 6.212034914652398 4 1.4895854350259112 3.5353736962721363 5 0.8230962266307212 2.441914945516772 6 0.5083338208896249 1.8097149485763762 7 0.33154432283946683 1.3770495054992151 8 0.24625448269470596 1.1689180093155533 9 0.18703413776365233 0.9987879846729769 >10 0.933287111290298 9.657853655083096 >50 0.05587628143910564 2.3041906107805157 >100 0.05709110152336399 6.697815626518428 >500 0.004249950789281271 1.7058475674480398 >1k 4.249950789281271E-4 0.264442517354466 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.338885641356202E-5 2 0.0 0.0 0.0 0.0 8.338885641356202E-5 3 0.0 0.0 0.0 0.0 8.338885641356202E-5 4 0.0 0.0 0.0 0.0 8.338885641356202E-5 5 0.0 0.0 0.0 0.0 8.338885641356202E-5 6 0.0 0.0 0.0 0.0 8.338885641356202E-5 7 0.0 0.0 0.0 0.0 8.338885641356202E-5 8 0.0 0.0 0.0 8.338885641356202E-5 8.338885641356202E-5 9 0.0 0.0 0.0 8.338885641356202E-5 8.338885641356202E-5 10 0.0 0.0 0.0 8.338885641356202E-5 8.338885641356202E-5 11 0.0 0.0 0.0 8.338885641356202E-5 8.338885641356202E-5 12 0.0 0.0 0.0 8.338885641356202E-5 6.671108513084962E-4 13 0.0 0.0 0.0 8.338885641356202E-5 6.671108513084962E-4 14 0.0 0.0 0.0 8.338885641356202E-5 6.671108513084962E-4 15 0.0 0.0 0.0 1.6677771282712405E-4 0.0010006662769627443 16 0.0 0.0 0.0 1.6677771282712405E-4 0.0010840551333763063 17 0.0 0.0 0.0 1.6677771282712405E-4 0.0011674439897898683 18 0.0 0.0 0.0 2.5016656924068607E-4 0.0011674439897898683 19 0.0 0.0 0.0 2.5016656924068607E-4 0.0011674439897898683 20 0.0 0.0 0.0 2.5016656924068607E-4 0.0013342217026169924 21 0.0 0.0 0.0 4.169442820678102E-4 0.0014176105590305544 22 0.0 0.0 0.0 9.172774205491824E-4 0.0014176105590305544 23 0.0 0.0 0.0 0.0021681102667526126 0.0014176105590305544 24 0.0 0.0 0.0 0.0033355542565424814 0.0014176105590305544 25 0.0 0.0 0.0 0.0035857208257831672 0.0014176105590305544 26 0.0 0.0 0.0 0.004419609389918788 0.0015843882718576787 27 0.0 0.0 0.0 0.005503664523295094 0.0015843882718576787 28 0.0 0.0 0.0 0.010090051626041006 0.0015843882718576787 29 0.0 0.0 0.0 0.01767843755967515 0.0016677771282712407 30 0.0 0.0 0.0 0.030603710303777266 0.0016677771282712407 31 0.0 0.0 0.0 0.06429280829485633 0.0016677771282712407 32 0.0 0.0 0.0 0.09956629455779306 0.0016677771282712407 33 0.0 0.0 0.0 0.13258828169756362 0.0016677771282712407 34 0.0 0.0 0.0 0.1693627673759445 0.0016677771282712407 35 0.0 0.0 0.0 0.21222463957251536 0.0016677771282712407 36 0.0 0.0 0.0 0.27068022791842233 0.0016677771282712407 37 0.0 0.0 0.0 0.3654933576606424 0.0016677771282712407 38 0.0 0.0 0.0 0.4954965848093856 0.0016677771282712407 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGACGT 80 8.991179E-5 19.249252 4 CGAACGT 185 1.8189894E-12 19.026289 4 TCTATAC 140 4.083631E-9 18.856411 3 GTATCAA 2275 0.0 18.760494 1 GTATAGG 100 2.4829254E-5 17.60005 1 ATACCGT 300 0.0 17.599316 6 ACCGTCG 305 0.0 17.310802 8 CTATTAC 115 4.2727097E-6 17.217442 1 CGTCGTA 350 0.0 16.97006 10 CCCTAAG 145 1.2491546E-7 16.689703 1 TATAGGG 95 3.3483404E-4 16.20922 2 TACCGTC 330 0.0 15.999379 7 GAACGTC 220 1.8189894E-11 15.999378 5 GTCCTAC 265 0.0 15.773629 1 AACGCAG 2740 0.0 15.656326 6 TCTAGCC 155 2.6683483E-7 15.612297 3 TAGGACG 155 2.6683483E-7 15.612297 4 ATAGCAC 100 4.945111E-4 15.399402 3 TATATAG 100 4.945111E-4 15.399402 5 AATTCCG 300 0.0 15.399401 42 >>END_MODULE