SRR4064081_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4064081_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1387939
Sequences flagged as poor quality	0
Sequence length	25
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	3519	0.2535414020356802	No Hit
TATCAACGCAGAGTACTTTTTTTTT	2515	0.1812039289911156	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTG	1707	0.12298811403094806	No Hit
GAATAGGACCGCGGTTCTATTTTGT	1617	0.11650367919627592	No Hit
GCGCAAGACGGACCAGAGCGAAAGC	1580	0.11383785598646627	No Hit
GTCTTGCGCCGGTCCAAGAATTTCA	1573	0.11333351105488065	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	1547	0.11146022988041981	No Hit
GTATCTGATCGTCTTCGAACCTCCG	1508	0.10865030811872856	No Hit
GATTAAGAGGGACGGCCGGGGGCAT	1504	0.10836211101496536	No Hit
GAACTACGACGGTATCTGATCGTCT	1454	0.10475964721792527	No Hit
GTCCTATTCCATTATTCCTAGCTGC	1423	0.10252611966376043	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAACGA	200	0.0	13.776883	16
CCTATAC	80	2.004801E-6	13.059106	3
AGAACCG	180	0.0	12.664288	5
GTCCTAA	235	0.0	12.530917	1
GTATTAG	205	0.0	12.511198	1
AAGACGG	305	0.0	12.4566765	5
CGAGCCG	325	0.0	12.278157	15
AAGACCG	70	1.0926514E-4	12.211992	5
ACTAGTG	55	0.0030724795	12.088637	5
CGTTATT	150	1.4551915E-11	12.027605	2
CGACCAT	190	0.0	12.000774	10
GTTATTC	190	0.0	11.996881	3
CCCTATA	95	1.0454896E-6	11.9942875	2
GTAGGAC	500	0.0	11.966888	3
ACGCGCG	80	2.8650044E-5	11.875338	13
AACCGCG	160	3.6379788E-12	11.874482	7
AATCGAA	120	1.0013537E-8	11.874481	7
ACTAGAC	80	2.8734728E-5	11.871914	3
AGGCCCG	345	0.0	11.841343	10
CGGTCCA	305	0.0	11.836829	10