##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064080_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1031634 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.212918535061853 32.0 32.0 32.0 32.0 32.0 2 31.41236620739526 32.0 32.0 32.0 32.0 32.0 3 31.49155902190118 32.0 32.0 32.0 32.0 32.0 4 31.562802311672552 32.0 32.0 32.0 32.0 32.0 5 31.51269733258113 32.0 32.0 32.0 32.0 32.0 6 35.087820874457414 36.0 36.0 36.0 36.0 36.0 7 35.112642662029366 36.0 36.0 36.0 36.0 36.0 8 35.06373772093591 36.0 36.0 36.0 36.0 36.0 9 35.160424142670756 36.0 36.0 36.0 36.0 36.0 10 35.024979789343895 36.0 36.0 36.0 36.0 36.0 11 35.16717750675143 36.0 36.0 36.0 36.0 36.0 12 35.069109781182085 36.0 36.0 36.0 36.0 36.0 13 35.100359235930576 36.0 36.0 36.0 36.0 36.0 14 35.049588322990516 36.0 36.0 36.0 36.0 36.0 15 35.02846261367888 36.0 36.0 36.0 36.0 36.0 16 35.03167208525504 36.0 36.0 36.0 36.0 36.0 17 34.99923034719678 36.0 36.0 36.0 36.0 36.0 18 34.985877743463284 36.0 36.0 36.0 36.0 36.0 19 34.97891500280138 36.0 36.0 36.0 36.0 36.0 20 34.96874763724344 36.0 36.0 36.0 36.0 36.0 21 34.94846718894492 36.0 36.0 36.0 36.0 36.0 22 34.945310061514064 36.0 36.0 36.0 36.0 36.0 23 34.891727104767774 36.0 36.0 36.0 32.0 36.0 24 34.855703670100056 36.0 36.0 36.0 32.0 36.0 25 34.828675673737 36.0 36.0 36.0 32.0 36.0 26 34.768666988486224 36.0 36.0 36.0 32.0 36.0 27 34.75750799217552 36.0 36.0 36.0 32.0 36.0 28 34.7309617558165 36.0 36.0 36.0 32.0 36.0 29 34.684074972325455 36.0 36.0 36.0 32.0 36.0 30 34.666017211530445 36.0 36.0 36.0 32.0 36.0 31 34.63397968659428 36.0 36.0 36.0 32.0 36.0 32 34.577906505601796 36.0 36.0 36.0 32.0 36.0 33 34.54638079008641 36.0 36.0 36.0 32.0 36.0 34 34.51668324231268 36.0 36.0 36.0 32.0 36.0 35 34.4495635079883 36.0 36.0 36.0 32.0 36.0 36 34.408621662333736 36.0 36.0 36.0 32.0 36.0 37 34.37430910574874 36.0 36.0 36.0 32.0 36.0 38 34.315730191133675 36.0 36.0 36.0 32.0 36.0 39 34.282669047355945 36.0 36.0 36.0 32.0 36.0 40 34.23135627557836 36.0 36.0 36.0 32.0 36.0 41 34.2055331638934 36.0 36.0 36.0 32.0 36.0 42 34.113251405052566 36.0 36.0 36.0 32.0 36.0 43 34.077068029940854 36.0 36.0 36.0 32.0 36.0 44 34.01784353753366 36.0 36.0 36.0 32.0 36.0 45 33.92132965761113 36.0 36.0 36.0 32.0 36.0 46 33.885986696832404 36.0 36.0 36.0 32.0 36.0 47 33.80464583369683 36.0 36.0 36.0 32.0 36.0 48 33.74361934562064 36.0 36.0 36.0 27.0 36.0 49 33.70767830451497 36.0 36.0 36.0 27.0 36.0 50 33.127065412733586 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 5.0 20 7.0 21 49.0 22 145.0 23 425.0 24 1072.0 25 2527.0 26 5156.0 27 9297.0 28 15284.0 29 22015.0 30 29998.0 31 41259.0 32 57460.0 33 87771.0 34 172993.0 35 586171.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.247106268297884 17.64061500281133 11.710452333404424 25.40182639548636 2 15.777377332354945 20.26765436023997 37.67943708445575 26.275531222949333 3 18.400316392811757 25.333622843095725 28.65952779536054 27.60653296873198 4 11.923511633001628 15.64188462187171 36.083630434824755 36.35097331030191 5 13.49984587557215 37.93428677224674 33.22147195613948 15.344395396041618 6 33.25449385052034 36.31546908199823 16.840695131597315 13.589341935884114 7 29.797874052231705 31.094167117407917 20.639587295494334 18.468371534866048 8 28.9334201858411 32.67311856724381 18.85891701902031 19.534544227894777 9 28.18126741790864 13.299600145401671 18.13604749787956 40.38308493881013 10 15.790810367005648 26.73971689160436 31.466752744957198 26.002719996432795 11 37.521482930460735 20.772212598860254 22.110576144811187 19.595728325867825 12 24.924779378693177 23.820509639096112 29.382667462816197 21.872043519394513 13 30.302231329734486 19.77032396399086 25.55332499052468 24.374119715749977 14 23.891659041208495 19.671646478589263 25.65323681312716 30.78345766707508 15 25.65577997588203 26.926723252125832 23.164009941876472 24.253486830115666 16 25.409959219756757 25.7144297309008 24.564886339733256 24.31072470960919 17 23.159667091235843 25.794904006653525 26.032197465380165 25.01323143673047 18 24.078667663146998 25.124002671497852 27.52767220062212 23.26965746473303 19 26.101408057508767 24.810349406863285 25.89067440584548 23.19756812978246 20 25.930858797938793 24.149208823335545 26.418922324713947 23.50101005401172 21 26.57027589241921 23.25960563533191 25.592506644798448 24.577611827450433 22 25.633074584735642 24.31787691735037 25.869883834545654 24.179164663368333 23 24.28377420821366 24.30820173648707 26.340533314980373 25.067490740318892 24 25.1803456665665 25.03038880218683 25.941083528009074 23.848182003237596 25 24.779835073811594 24.53100145112557 25.886936283276775 24.802227191786066 26 24.15146577120572 24.898674160723477 26.730052066116507 24.219808001954295 27 24.55955314541193 25.250638349848675 26.115730840295242 24.074077664444154 28 24.299309124079453 24.586148165596956 26.44851777209722 24.666024938226368 29 24.27274154868003 24.86356330953244 26.235878923705958 24.62781621808157 30 24.25239121394276 25.120663364964145 26.706372402187306 23.920573018905785 31 24.562260675682225 24.757500848238088 25.327710726576512 25.352527749503174 32 23.77852246851732 25.283176893347125 25.642231138262055 25.296069499873497 33 24.101114500723643 24.72733653036159 26.137499357783135 25.034049611131632 34 24.460768490326256 25.16849924438279 26.4470869236056 23.92364534168535 35 25.04926798390466 24.605395680315002 26.220067215779714 24.12526912000062 36 24.332302215949134 25.23209835134315 25.85803927423037 24.577560158477347 37 25.183792880158514 25.309035707777078 25.16333913663876 24.34383227542565 38 24.62682226483356 25.451409825640347 25.712183460553383 24.209584448972706 39 25.095798625618098 24.646201837743835 25.752260343488842 24.505739193149225 40 25.680856529388674 25.29902433586499 25.381032468822855 23.63908666592349 41 24.279345519616673 25.253757038843656 26.322876084362402 24.14402135717727 42 25.202547474336235 26.18906369655199 25.472804645166292 23.135584183945486 43 24.22737873902937 25.20962216634452 25.60046451302711 24.962534581599 44 24.037025225349232 25.765373136064508 25.43850890976434 24.759092728821923 45 24.56490846453449 25.5620760317248 25.134787742021786 24.738227761718925 46 24.429977530616714 25.308978253747 25.154852630701434 25.10619158493485 47 24.82575914728126 25.28445606804069 25.2042907355242 24.685494049153853 48 25.003416972417035 25.948052325722287 24.23762740945023 24.810903292410444 49 24.93297015402809 25.65600069792464 25.304808894661846 24.10622025338542 50 24.305948678976062 26.459349530449078 24.26116492055245 24.97353687002241 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 41.0 1 33.5 2 26.0 3 95.0 4 164.0 5 195.0 6 226.0 7 273.0 8 320.0 9 462.0 10 604.0 11 872.0 12 1140.0 13 2126.5 14 3113.0 15 4423.0 16 5733.0 17 6368.0 18 7003.0 19 7156.0 20 7309.0 21 7459.0 22 7609.0 23 7887.0 24 8165.0 25 7697.5 26 7230.0 27 8755.0 28 10280.0 29 12080.5 30 13881.0 31 15955.0 32 18029.0 33 21498.5 34 24968.0 35 28411.0 36 31854.0 37 35408.0 38 38962.0 39 40697.5 40 42433.0 41 46370.0 42 50307.0 43 51918.5 44 53530.0 45 60193.5 46 66857.0 47 69630.5 48 72404.0 49 75452.5 50 78501.0 51 74951.5 52 71402.0 53 69740.0 54 68078.0 55 67683.5 56 67289.0 57 65586.0 58 63883.0 59 58877.0 60 53871.0 61 48148.5 62 42426.0 63 36747.0 64 31068.0 65 26371.5 66 21675.0 67 18222.5 68 14770.0 69 13866.0 70 12962.0 71 10305.5 72 7649.0 73 7385.0 74 7121.0 75 6091.0 76 5061.0 77 5123.0 78 5185.0 79 4659.5 80 4134.0 81 3057.0 82 1980.0 83 1633.5 84 1287.0 85 964.5 86 642.0 87 443.0 88 244.0 89 169.5 90 95.0 91 77.0 92 59.0 93 43.0 94 27.0 95 23.0 96 19.0 97 14.5 98 10.0 99 9.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009111758627575284 2 4.846680121050683E-4 3 4.846680121050683E-4 4 0.0 5 0.0 6 1.938672048420273E-4 7 0.0 8 0.0 9 8.724024217891228E-4 10 0.0014540040363152048 11 9.693360242101366E-5 12 1.938672048420273E-4 13 6.785352169470956E-4 14 1.938672048420273E-4 15 0.0036834768919985186 16 6.785352169470956E-4 17 0.0 18 2.90800807263041E-4 19 0.0 20 5.81601614526082E-4 21 0.0 22 1.938672048420273E-4 23 0.00106626962663115 24 3.877344096840546E-4 25 0.002035605650841287 26 0.005912949747681833 27 0.006591484964628929 28 0.004362012108945614 29 0.0019386720484202732 30 0.004362012108945614 31 0.008142422603365148 32 0.003392676084735478 33 0.004943613723471696 34 0.0026172072653673686 35 0.0030049416750514233 36 0.006494551362207915 37 0.0036834768919985186 38 0.0085301570130492 39 0.0041681449041035875 40 0.002811074470209396 41 0.003586543289577505 42 0.002326406458104328 43 0.0015509376387362185 44 0.0012601368314731774 45 0.001163203229052164 46 7.754688193681092E-4 47 0.0015509376387362185 48 0.0018417384459992593 49 3.877344096840546E-4 50 9.693360242101366E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1031634.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.489890669317155 #Duplication Level Percentage of deduplicated Percentage of total 1 75.15912361868354 40.20253305165076 2 14.287724607503954 15.284976543373977 3 4.849985760391066 7.782756242131892 4 2.081431447939158 4.4534216234377615 5 1.0640717755238747 2.8458541468539122 6 0.6400985789716029 2.054328180406579 7 0.3841513606154254 1.4383749995851973 8 0.246291537602112 1.053928593529199 9 0.19334591384281913 0.9307846613530448 >10 0.9041835725341085 9.023253581681445 >50 0.09909273608140476 3.7263936429718947 >100 0.08429552404701812 8.683843631647516 >500 0.005291277107451569 1.8728767289828276 >1k 9.12289156457167E-4 0.6466743723939665 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1565 0.15170108778888636 No Hit GCCTAGTACCCTGGAAACGGTTCGTCCGGAGATAGGGTCGGACGGCTGGA 1442 0.1397782546911017 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1369 0.1327021017143677 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 1189 0.11525405327858523 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 1061 0.10284655216869548 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 1.938672048420273E-4 0.0 0.0 0.0 3 0.0 1.938672048420273E-4 0.0 0.0 0.0 4 0.0 1.938672048420273E-4 0.0 0.0 0.0 5 0.0 1.938672048420273E-4 0.0 0.0 0.0 6 0.0 1.938672048420273E-4 0.0 0.0 0.0 7 0.0 2.9080080726304094E-4 0.0 0.0 0.0 8 0.0 2.9080080726304094E-4 0.0 0.0 0.0 9 0.0 2.9080080726304094E-4 0.0 0.0 0.0 10 0.0 2.9080080726304094E-4 0.0 0.0 0.0 11 0.0 2.9080080726304094E-4 0.0 0.0 0.0 12 0.0 2.9080080726304094E-4 0.0 0.0 3.877344096840546E-4 13 0.0 2.9080080726304094E-4 0.0 9.693360242101366E-5 4.8466801210506825E-4 14 0.0 3.877344096840546E-4 0.0 2.9080080726304094E-4 4.8466801210506825E-4 15 0.0 3.877344096840546E-4 0.0 2.9080080726304094E-4 5.816016145260819E-4 16 0.0 4.8466801210506825E-4 0.0 3.877344096840546E-4 5.816016145260819E-4 17 0.0 7.754688193681092E-4 0.0 3.877344096840546E-4 5.816016145260819E-4 18 0.0 7.754688193681092E-4 0.0 3.877344096840546E-4 5.816016145260819E-4 19 0.0 7.754688193681092E-4 0.0 4.8466801210506825E-4 5.816016145260819E-4 20 0.0 7.754688193681092E-4 0.0 5.816016145260819E-4 5.816016145260819E-4 21 0.0 7.754688193681092E-4 0.0 7.754688193681092E-4 5.816016145260819E-4 22 0.0 8.724024217891229E-4 0.0 0.0014540040363152048 5.816016145260819E-4 23 0.0 9.693360242101365E-4 0.0 0.002811074470209396 5.816016145260819E-4 24 0.0 0.0010662696266311503 0.0 0.004943613723471696 5.816016145260819E-4 25 0.0 0.0010662696266311503 0.0 0.006203750554944874 5.816016145260819E-4 26 0.0 0.0010662696266311503 0.0 0.0072700201815760245 5.816016145260819E-4 27 0.0 0.0010662696266311503 0.0 0.00930562583241731 5.816016145260819E-4 28 0.0 0.0010662696266311503 0.0 0.012310567507468733 5.816016145260819E-4 29 0.0 0.0010662696266311503 0.0 0.02045299011083388 5.816016145260819E-4 30 0.0 0.0010662696266311503 0.0 0.034314495257038835 5.816016145260819E-4 31 0.0 0.0010662696266311503 0.0 0.06620565045355233 5.816016145260819E-4 32 0.0 0.0010662696266311503 0.0 0.09858147366217089 5.816016145260819E-4 33 0.0 0.0010662696266311503 0.0 0.1285339568102641 6.785352169470956E-4 34 0.0 0.0010662696266311503 0.0 0.16090978001888268 8.724024217891229E-4 35 0.0 0.0010662696266311503 0.0 0.19968322098728813 8.724024217891229E-4 36 0.0 0.0010662696266311503 0.0 0.2500886942462152 8.724024217891229E-4 37 0.0 0.0010662696266311503 0.0 0.3309313186653406 8.724024217891229E-4 38 0.0 0.0011632032290521638 0.0 0.43406867164129914 8.724024217891229E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCGTA 140 0.0 26.713669 10 TACGTCC 75 2.0659354E-6 23.46385 6 TAGGCTG 355 0.0 21.687536 5 ACTAGGC 325 0.0 21.657888 3 ACCGTCG 175 0.0 21.368862 8 ATACCGT 175 0.0 21.368862 6 GTCGTAG 200 0.0 20.898502 11 GATATAC 300 0.0 20.533854 1 TTATTCG 75 5.470569E-5 20.533854 22 AACGGTT 355 0.0 20.450232 16 ACGTATG 65 4.9258117E-4 20.311161 32 ACGTTGC 65 4.9322576E-4 20.307222 15 GTACTAG 360 0.0 20.167177 1 CGGTTTA 55 0.0044787447 20.003416 31 GCCTAGT 385 0.0 20.000505 1 CCTAGTA 435 0.0 19.21515 2 AAACGGT 390 0.0 19.179043 15 CGGTTCG 405 0.0 19.010984 18 ACTGTTC 375 0.0 18.77108 8 CCGTCGT 190 1.8189894E-12 18.524988 9 >>END_MODULE