##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064079_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2492581 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.265115556926737 32.0 32.0 32.0 32.0 32.0 2 31.419162707250035 32.0 32.0 32.0 32.0 32.0 3 31.497543309525348 32.0 32.0 32.0 32.0 32.0 4 31.585395620042036 32.0 32.0 32.0 32.0 32.0 5 31.52543809007611 32.0 32.0 32.0 32.0 32.0 6 35.12981684446764 36.0 36.0 36.0 36.0 36.0 7 35.14900418481887 36.0 36.0 36.0 36.0 36.0 8 35.109587612197956 36.0 36.0 36.0 36.0 36.0 9 35.205255917460654 36.0 36.0 36.0 36.0 36.0 10 35.06227360314469 36.0 36.0 36.0 36.0 36.0 11 35.209378551790294 36.0 36.0 36.0 36.0 36.0 12 35.11480148488655 36.0 36.0 36.0 36.0 36.0 13 35.15317897392301 36.0 36.0 36.0 36.0 36.0 14 35.099043120363994 36.0 36.0 36.0 36.0 36.0 15 35.07868309996746 36.0 36.0 36.0 36.0 36.0 16 35.08934353587707 36.0 36.0 36.0 36.0 36.0 17 35.04749935909806 36.0 36.0 36.0 36.0 36.0 18 35.04396446895808 36.0 36.0 36.0 36.0 36.0 19 35.04677079701723 36.0 36.0 36.0 36.0 36.0 20 35.03364023074877 36.0 36.0 36.0 36.0 36.0 21 35.03199575058945 36.0 36.0 36.0 36.0 36.0 22 35.01481757262853 36.0 36.0 36.0 36.0 36.0 23 34.96954562359257 36.0 36.0 36.0 36.0 36.0 24 34.94219686341186 36.0 36.0 36.0 36.0 36.0 25 34.91819884689806 36.0 36.0 36.0 36.0 36.0 26 34.86552051869127 36.0 36.0 36.0 32.0 36.0 27 34.85616234738209 36.0 36.0 36.0 32.0 36.0 28 34.83330491566774 36.0 36.0 36.0 32.0 36.0 29 34.79654141630703 36.0 36.0 36.0 32.0 36.0 30 34.773754995324126 36.0 36.0 36.0 32.0 36.0 31 34.763167174908254 36.0 36.0 36.0 32.0 36.0 32 34.71594463730567 36.0 36.0 36.0 32.0 36.0 33 34.692197364900075 36.0 36.0 36.0 32.0 36.0 34 34.6697182558962 36.0 36.0 36.0 32.0 36.0 35 34.62666890263546 36.0 36.0 36.0 32.0 36.0 36 34.59796532188924 36.0 36.0 36.0 32.0 36.0 37 34.57158423337095 36.0 36.0 36.0 32.0 36.0 38 34.53224870124582 36.0 36.0 36.0 32.0 36.0 39 34.50840113119694 36.0 36.0 36.0 32.0 36.0 40 34.49114151154968 36.0 36.0 36.0 32.0 36.0 41 34.468083083358174 36.0 36.0 36.0 32.0 36.0 42 34.40266855921633 36.0 36.0 36.0 32.0 36.0 43 34.38240963884424 36.0 36.0 36.0 32.0 36.0 44 34.301755890781486 36.0 36.0 36.0 32.0 36.0 45 34.259018663786655 36.0 36.0 36.0 32.0 36.0 46 34.20174188923048 36.0 36.0 36.0 32.0 36.0 47 34.153669228803395 36.0 36.0 36.0 32.0 36.0 48 34.093414015432195 36.0 36.0 36.0 32.0 36.0 49 34.055319365749796 36.0 36.0 36.0 32.0 36.0 50 33.47201114025984 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 3.0 19 14.0 20 19.0 21 72.0 22 251.0 23 792.0 24 1961.0 25 4512.0 26 9417.0 27 17276.0 28 28932.0 29 44065.0 30 62726.0 31 88431.0 32 127654.0 33 205645.0 34 425755.0 35 1475055.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.91825038457804 18.008082357878656 12.00597670785149 26.067690549691815 2 15.555532375581377 20.524373809713897 38.096777907808516 25.823315906896205 3 18.36138064506811 24.993560873217806 28.67702222682255 27.968036254891533 4 12.08426125369647 16.203084272888223 36.140570757780786 35.57208371563452 5 13.829119294418115 37.436416309038705 33.42828176897762 15.306182627565565 6 33.66626881839062 35.93384351524026 17.035756195901826 13.364131470467289 7 29.699106949425897 30.67817281692062 20.963620024231922 18.659100209421563 8 27.778635879837005 33.60179669186277 19.36394444152467 19.255622986775556 9 27.758480271208203 13.898457403061121 18.57615694770416 39.76690537802652 10 15.858660748243972 27.16789512452278 31.69128396714056 25.282160160092694 11 36.86322479648589 21.091528091988256 23.12500426265326 18.920242848872594 12 25.25038313715107 23.624758282582707 29.282871562798384 21.841987017467844 13 29.91851339808879 19.864460471716395 25.42224711410812 24.794779016086693 14 23.498078692949537 19.947853102856726 25.737410403863635 30.8166578003301 15 24.641446163462916 28.03085165839299 22.723929895287476 24.60377228285662 16 24.839331787131215 25.88091194631702 24.841417996524857 24.438338270026907 17 23.363542995610974 26.25331985332467 25.820595527525697 24.562541623538664 18 24.11648667222718 24.989077569118226 27.532389169923338 23.36204658873126 19 25.526583320562086 24.560114066641045 26.075011494123757 23.838291118673116 20 25.853569882542494 24.353185338292622 25.84045084553598 23.952793933628907 21 26.551674749988063 23.996893180201567 25.081391537526766 24.370040532283603 22 25.768672341917622 24.625839041281374 25.51925176233272 24.086236854468286 23 24.149730277521684 24.597863563674643 26.403836694934768 24.848569463868902 24 24.821730182101202 24.83051629442704 26.19645586683624 24.15129765663552 25 24.609412925822358 24.72812764540447 26.40044452825041 24.262014900522765 26 23.894985508269755 25.64875769120899 26.756580657792956 23.699676142728297 27 24.576886272952137 25.226858288045932 25.878956754794046 24.317298684207884 28 23.83719740612905 25.223320766253522 26.412893767720725 24.526588059896707 29 24.080577248281354 25.015857477286996 26.056693741060737 24.846871533370912 30 23.769527261435112 25.291467082745395 26.47703469279757 24.461970963021926 31 24.756479112050503 24.91845189805464 25.613927813981256 24.7111411759136 32 24.334859790361577 25.38353336152478 25.466783711978664 24.814823136134986 33 23.864976302728085 25.09323039975029 26.19482355131293 24.846969746208696 34 24.644301624358924 25.144684574588233 26.34352541293028 23.867488388122567 35 24.86846571282075 25.134864269133157 26.191551795662676 23.805118222383417 36 23.87205623619523 25.571820915643702 26.104491954364264 24.451630893796803 37 24.72696883145749 25.41535923443348 25.474777942138775 24.38289399197025 38 24.27800908288828 25.632337617994693 25.77914514606326 24.31050815305377 39 24.959247334476775 25.03575763046771 25.44900149449844 24.55599354055708 40 25.29448155999801 25.287179701153374 25.777407246332622 23.640931492515996 41 24.288516402989284 25.409758784643387 26.299587202101666 24.002137610265663 42 25.031734747261424 26.04985444543228 25.58683204575581 23.331578761550485 43 24.247925508888727 25.268531405125454 25.966534525638313 24.5170085603475 44 23.821569219017295 25.79978271265755 25.549436882359927 24.829211185965228 45 24.014812169890615 25.961497184604493 25.512117133291472 24.51157351221342 46 24.09623859854647 25.356471572342436 25.496689140259694 25.0506006888514 47 24.67533874338471 25.341571846335498 25.64415706026148 24.338932350018315 48 24.822469681432374 25.83481375565088 24.89777463238185 24.444941930534895 49 24.452502179480028 25.88668629569436 25.006910546436668 24.653900978388947 50 24.219033344138857 26.39218760531375 24.871737881496557 24.517041169050835 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 61.0 1 60.5 2 60.0 3 198.5 4 337.0 5 396.0 6 455.0 7 510.5 8 566.0 9 765.0 10 964.0 11 1456.5 12 1949.0 13 3692.0 14 5435.0 15 7589.5 16 9744.0 17 10816.0 18 11888.0 19 12129.5 20 12371.0 21 13092.5 22 13814.0 23 14942.5 24 16071.0 25 16722.0 26 17373.0 27 21345.5 28 25318.0 29 30464.5 30 35611.0 31 41636.5 32 47662.0 33 56865.0 34 66068.0 35 76363.0 36 86658.0 37 96439.5 38 106221.0 39 110723.0 40 115225.0 41 121001.5 42 126778.0 43 128402.0 44 130026.0 45 141568.5 46 153111.0 47 162857.5 48 172604.0 49 178663.0 50 184722.0 51 180190.0 52 175658.0 53 173318.5 54 170979.0 55 172132.0 56 173285.0 57 168273.5 58 163262.0 59 148817.5 60 134373.0 61 117633.5 62 100894.0 63 87524.0 64 74154.0 65 62686.5 66 51219.0 67 43621.0 68 36023.0 69 32008.5 70 27994.0 71 21539.5 72 15085.0 73 12959.0 74 10833.0 75 8401.0 76 5969.0 77 5208.0 78 4447.0 79 3776.0 80 3105.0 81 2476.5 82 1848.0 83 1531.0 84 1214.0 85 874.5 86 535.0 87 393.5 88 252.0 89 190.0 90 128.0 91 106.5 92 85.0 93 67.0 94 49.0 95 46.0 96 43.0 97 36.0 98 29.0 99 27.5 100 26.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009588454698162267 2 3.2095245851589176E-4 3 2.808334012014053E-4 4 0.0 5 0.0 6 2.4071434388691883E-4 7 4.011905731448647E-5 8 0.0 9 0.0012436907767490806 10 0.0010029764328621617 11 8.023811462897294E-5 12 4.011905731448647E-5 13 9.628573755476753E-4 14 2.808334012014053E-4 15 0.005536429909399133 16 8.826192609187024E-4 17 4.011905731448647E-5 18 1.6047622925794588E-4 19 1.2035717194345942E-4 20 8.023811462897295E-4 21 0.0 22 1.6047622925794588E-4 23 7.622620889752429E-4 24 4.413096304593512E-4 25 0.00204607192303881 26 0.005014882164310809 27 0.006659763514204754 28 0.003610715158303782 29 0.002647857782756107 30 0.0041723819607065935 31 0.00750226371780897 32 0.0039717866741341605 33 0.004011905731448647 34 0.003610715158303782 35 0.0030089292985864854 36 0.009468097526218808 37 0.004011905731448647 38 0.008104049577526267 39 0.004252620075335565 40 0.0026077387254416205 41 0.0031292864705299447 42 0.001805357579151891 43 0.0016850004072084318 44 0.0011634526621201076 45 0.0014442860633215129 46 0.0010430954901766484 47 0.002407143438869188 48 0.001965833808409837 49 5.616668024028106E-4 50 0.0011634526621201076 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2492581.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.07896033754668 #Duplication Level Percentage of deduplicated Percentage of total 1 72.99074043442764 35.82309654789439 2 14.85132281567432 14.577749668611641 3 5.1830150847859455 7.631309753253468 4 2.3986869658722094 4.709002498409295 5 1.2367574777319112 3.0349385598384377 6 0.7722623986270665 2.274110137943788 7 0.49287075171800027 1.693270885257319 8 0.3400656847394996 1.3352056202792446 9 0.2508917527956084 1.108215574602591 >10 1.3019208812159095 11.43804620046452 >50 0.09246346933433403 3.1623189702440357 >100 0.07665070817517625 7.666185189781041 >500 0.008563758599035604 2.866812235477361 >1k 0.0037878163034184885 2.679738157942835 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2574 0.10326645352748817 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.011905731448647E-5 2 0.0 0.0 0.0 0.0 4.011905731448647E-5 3 0.0 0.0 0.0 0.0 4.011905731448647E-5 4 0.0 0.0 0.0 4.011905731448647E-5 4.011905731448647E-5 5 0.0 0.0 0.0 4.011905731448647E-5 4.011905731448647E-5 6 0.0 0.0 0.0 4.011905731448647E-5 4.011905731448647E-5 7 0.0 0.0 0.0 4.011905731448647E-5 4.011905731448647E-5 8 0.0 0.0 0.0 4.011905731448647E-5 4.011905731448647E-5 9 0.0 0.0 0.0 8.023811462897294E-5 4.011905731448647E-5 10 0.0 0.0 0.0 8.023811462897294E-5 8.023811462897294E-5 11 0.0 0.0 0.0 8.023811462897294E-5 8.023811462897294E-5 12 0.0 0.0 0.0 1.2035717194345942E-4 3.2095245851589176E-4 13 0.0 0.0 0.0 1.2035717194345942E-4 4.4130963045935115E-4 14 0.0 0.0 0.0 1.2035717194345942E-4 4.4130963045935115E-4 15 0.0 0.0 0.0 1.6047622925794588E-4 7.221430316607564E-4 16 0.0 0.0 0.0 1.6047622925794588E-4 7.62262088975243E-4 17 0.0 0.0 0.0 2.808334012014053E-4 7.62262088975243E-4 18 0.0 0.0 0.0 2.808334012014053E-4 9.628573755476753E-4 19 0.0 0.0 0.0 2.808334012014053E-4 9.628573755476753E-4 20 0.0 0.0 0.0 2.808334012014053E-4 0.0010832145474911348 21 0.0 0.0 0.0 4.011905731448647E-4 0.0011634526621201076 22 0.0 0.0 0.0 6.01785859717297E-4 0.0012436907767490806 23 0.0 0.0 0.0 0.0013239288913780534 0.0014041670060070265 24 0.0 0.0 0.0 0.00204607192303881 0.0014844051206359993 25 0.0 0.0 0.0 0.002407143438869188 0.0014844051206359993 26 0.0 0.0 0.0 0.003169405527844431 0.0017251194645229182 27 0.0 0.0 0.0 0.0045735725338514575 0.0017652385218374046 28 0.0 0.0 0.0 0.008104049577526267 0.0017652385218374046 29 0.0 0.0 0.0 0.015124884607561399 0.0018053575791518912 30 0.0 0.0 0.0 0.02764203048968118 0.0018053575791518912 31 0.0 0.0 0.0 0.05981751445589933 0.0018053575791518912 32 0.0 0.0 0.0 0.0946007371475591 0.0018053575791518912 33 0.0 0.0 0.0 0.12412836333102113 0.0018454766364663776 34 0.0 0.0 0.0 0.15698587127158556 0.001965833808409837 35 0.0 0.0 0.0 0.19694445235681407 0.001965833808409837 36 0.0 0.0 0.0 0.2521482752215475 0.001965833808409837 37 0.0 0.0 0.0 0.3300996035835947 0.001965833808409837 38 0.0 0.0 0.0 0.4361743911230969 0.0020861909803532963 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGATCG 150 2.1827873E-11 20.53398 26 GTATCAA 7005 0.0 18.498796 1 TAACCGT 60 0.00741291 18.33391 25 TAGGACG 1340 0.0 18.222628 4 GTCCTAC 1530 0.0 17.543034 1 GTAGGAC 1840 0.0 17.455318 3 GATATAC 695 0.0 17.41062 1 TGTAGGA 1855 0.0 17.076649 2 GTCCTAA 895 0.0 16.469791 1 AACGCAG 7880 0.0 16.247612 6 ACCGTCG 570 0.0 16.20941 8 TCCTACA 1690 0.0 16.140577 2 TACCGTC 655 0.0 16.121027 7 ATTTCGT 765 0.0 16.104113 42 AGGACGT 1465 0.0 16.067154 5 TACGCTG 110 5.6283992E-5 15.998899 5 TAGGACC 1645 0.0 15.913798 4 GATTTCG 790 0.0 15.872643 41 CTGTAGG 1945 0.0 15.72286 1 ATACCGT 620 0.0 15.611829 6 >>END_MODULE