##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064078_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 956845 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.300893039102466 32.0 32.0 32.0 32.0 32.0 2 31.416176078675228 32.0 32.0 32.0 32.0 32.0 3 31.4886967063631 32.0 32.0 32.0 32.0 32.0 4 31.57317851898688 32.0 32.0 32.0 32.0 32.0 5 31.528038501533686 32.0 32.0 32.0 32.0 32.0 6 35.1080373519222 36.0 36.0 36.0 36.0 36.0 7 35.12717629292101 36.0 36.0 36.0 36.0 36.0 8 35.074248180217275 36.0 36.0 36.0 36.0 36.0 9 35.17519451948853 36.0 36.0 36.0 36.0 36.0 10 35.03691402473755 36.0 36.0 36.0 36.0 36.0 11 35.177621244820216 36.0 36.0 36.0 36.0 36.0 12 35.08843334082323 36.0 36.0 36.0 36.0 36.0 13 35.12309830745836 36.0 36.0 36.0 36.0 36.0 14 35.06298094257691 36.0 36.0 36.0 36.0 36.0 15 35.05184747790917 36.0 36.0 36.0 36.0 36.0 16 35.056886956612615 36.0 36.0 36.0 36.0 36.0 17 35.0112055766608 36.0 36.0 36.0 36.0 36.0 18 35.01321008104761 36.0 36.0 36.0 36.0 36.0 19 35.01407437986299 36.0 36.0 36.0 36.0 36.0 20 35.00269009087156 36.0 36.0 36.0 36.0 36.0 21 34.989859381613535 36.0 36.0 36.0 36.0 36.0 22 34.98869722891377 36.0 36.0 36.0 36.0 36.0 23 34.93580360455455 36.0 36.0 36.0 36.0 36.0 24 34.90891837235916 36.0 36.0 36.0 32.0 36.0 25 34.876141903861125 36.0 36.0 36.0 32.0 36.0 26 34.8144694281728 36.0 36.0 36.0 32.0 36.0 27 34.81435446702444 36.0 36.0 36.0 32.0 36.0 28 34.77937283468064 36.0 36.0 36.0 32.0 36.0 29 34.75040889590268 36.0 36.0 36.0 32.0 36.0 30 34.730431783622215 36.0 36.0 36.0 32.0 36.0 31 34.73561444121044 36.0 36.0 36.0 32.0 36.0 32 34.68219931127821 36.0 36.0 36.0 32.0 36.0 33 34.65044599700056 36.0 36.0 36.0 32.0 36.0 34 34.638802522874656 36.0 36.0 36.0 32.0 36.0 35 34.60822912801969 36.0 36.0 36.0 32.0 36.0 36 34.575567620670014 36.0 36.0 36.0 32.0 36.0 37 34.55771519943146 36.0 36.0 36.0 32.0 36.0 38 34.51607836169912 36.0 36.0 36.0 32.0 36.0 39 34.507593183849 36.0 36.0 36.0 32.0 36.0 40 34.49658931174851 36.0 36.0 36.0 32.0 36.0 41 34.48240833154795 36.0 36.0 36.0 32.0 36.0 42 34.40587242447836 36.0 36.0 36.0 32.0 36.0 43 34.38700207452618 36.0 36.0 36.0 32.0 36.0 44 34.323881088368545 36.0 36.0 36.0 32.0 36.0 45 34.28803202190532 36.0 36.0 36.0 32.0 36.0 46 34.25405055155224 36.0 36.0 36.0 32.0 36.0 47 34.21422382935585 36.0 36.0 36.0 32.0 36.0 48 34.170104875920345 36.0 36.0 36.0 32.0 36.0 49 34.15487670416839 36.0 36.0 36.0 32.0 36.0 50 33.54975570755974 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 3.0 20 13.0 21 37.0 22 110.0 23 363.0 24 855.0 25 1850.0 26 3884.0 27 6845.0 28 11403.0 29 17226.0 30 24329.0 31 34114.0 32 49417.0 33 78401.0 34 161991.0 35 566002.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.197281051708515 17.726781964678967 11.579621788794974 26.496315194817548 2 15.973913997711204 20.65277712458261 37.10775630072061 26.265552576985584 3 18.096072187391243 24.641764636413708 28.817266782533814 28.44489639366124 4 12.12641545913915 15.941975973119993 36.253520685168446 35.67808788257241 5 14.098103663602778 37.279183148785854 33.31051528721998 15.312197900391391 6 33.80826321559545 36.1363358461106 16.794500247166987 13.260900691126967 7 29.99325909630086 30.643834685868658 20.942890436800106 18.420015781030365 8 27.9713307498401 32.97434064487001 19.57560480078257 19.478723804507318 9 27.840385939866202 13.562554803189272 18.301417279713387 40.29564197723114 10 15.521331719685048 26.66595599255046 31.96215033265819 25.8505619551063 11 37.369584415448685 20.817791805360326 22.78843490847525 19.02418887071574 12 24.959345515047385 23.58284109008365 29.06450790306466 22.39330549180431 13 29.814086532482342 19.363260221373828 25.33278709255332 25.48986615359051 14 23.537170113414515 19.537876602664596 25.472281793061356 31.452671490859537 15 25.08711420478893 27.369433208959126 22.441288056940394 25.102164529311555 16 25.472781675457785 25.561720543833484 24.175172991847095 24.790324788861636 17 23.90042274349555 25.855389326379925 25.426375222737224 24.817812707387297 18 24.744811844785403 24.710845979957003 26.632477846417856 23.911864328839734 19 25.642397671514196 24.56709289383338 25.662150087004687 24.128359347647738 20 26.062246561598595 23.933991053885705 25.281969817315332 24.721792567200367 21 26.962256164791583 23.87492227058719 24.567510934372862 24.595310630248367 22 25.879844697939582 24.22764397577455 25.222789480009823 24.669721846276044 23 24.36347636695031 24.15623125335741 25.628685315591564 25.851607064100712 24 24.806734633091043 24.61098715047892 25.649086320145898 24.933191896284143 25 24.872234357200337 24.337134078153905 25.645412455713135 25.145219108932622 26 24.55163043478261 25.24602842809365 25.85211120401338 24.350229933110366 27 25.146374245657892 24.765937077364615 25.200513381145782 24.887175295831703 28 24.388049125381343 24.682880843463277 25.881333630150806 25.047736401004585 29 24.56232944931529 24.696000426409373 25.67768259047874 25.0639875337966 30 24.42342322569452 24.920595603520447 25.923301467060895 24.73267970372414 31 25.10041566808428 24.71537135767836 24.908207066880024 25.276005907357334 32 24.757658513541337 24.923417477432846 24.897602556826794 25.421321452199024 33 24.417256908626676 24.522606868023047 25.5838404867837 25.476295736566573 34 25.12831500013064 24.690303869568623 25.584615786585847 24.596765343714893 35 25.63630111860237 24.450183368014223 25.659921050898866 24.253594462484546 36 24.657495589354248 25.148728647039643 25.282824820020565 24.91095094358554 37 25.473994450337837 24.984558143423754 24.914011590537356 24.62743581570105 38 24.642882899455348 24.95121550986194 25.37096593813071 25.034935652551997 39 25.335464026780684 24.65026980306414 24.996420393202822 25.017845776952345 40 25.73624242018858 24.826456024029646 25.33533022999149 24.101971325790274 41 24.556707754243753 25.07122566674122 25.845667619129237 24.526398959885785 42 25.558592219057825 25.341206594727357 25.157264912601573 23.942936273613252 43 24.86870694763641 24.478146042814338 25.552423682810616 25.100723326738635 44 24.491107643653596 25.239200571050542 24.92545721144651 25.344234573849356 45 24.75181196340017 25.49467776575899 24.925718645325475 24.82779162551537 46 24.553163649437 24.914562339706407 25.073732439556125 25.45854157130047 47 24.97199078622281 24.796933200115383 25.45420911595396 24.776866897707844 48 25.35233936617061 25.331750310142255 24.51184602312454 24.804064300562594 49 24.616262506022434 25.495929827275017 24.78118053298413 25.106627133718423 50 24.907062808506016 25.83606893185721 24.462573772325044 24.794294487311735 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 119.0 1 76.0 2 33.0 3 125.5 4 218.0 5 224.5 6 231.0 7 223.0 8 215.0 9 329.5 10 444.0 11 583.5 12 723.0 13 1356.5 14 1990.0 15 2519.0 16 3048.0 17 3158.0 18 3268.0 19 3211.5 20 3155.0 21 3379.0 22 3603.0 23 4048.5 24 4494.0 25 4895.0 26 5296.0 27 6490.5 28 7685.0 29 9323.5 30 10962.0 31 13107.5 32 15253.0 33 18199.0 34 21145.0 35 24526.0 36 27907.0 37 31731.5 38 35556.0 39 38730.0 40 41904.0 41 45725.0 42 49546.0 43 51142.5 44 52739.0 45 57919.5 46 63100.0 47 66312.5 48 69525.0 49 72059.0 50 74593.0 51 72219.0 52 69845.0 53 68941.5 54 68038.0 55 68150.5 56 68263.0 57 66225.5 58 64188.0 59 58280.5 60 52373.0 61 46126.0 62 39879.0 63 34764.5 64 29650.0 65 25243.5 66 20837.0 67 18054.5 68 15272.0 69 13780.5 70 12289.0 71 9660.0 72 7031.0 73 5867.0 74 4703.0 75 3692.0 76 2681.0 77 2362.5 78 2044.0 79 1675.0 80 1306.0 81 1030.0 82 754.0 83 639.5 84 525.0 85 365.0 86 205.0 87 142.0 88 79.0 89 60.5 90 42.0 91 35.5 92 29.0 93 22.0 94 15.0 95 17.0 96 19.0 97 15.5 98 12.0 99 13.0 100 14.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008151790519885665 2 0.0010451013487032905 3 2.0902026974065811E-4 4 0.0 5 0.0 6 2.0902026974065811E-4 7 0.0 8 1.0451013487032906E-4 9 0.0012541216184439486 10 7.315709440923033E-4 11 0.0 12 1.0451013487032906E-4 13 2.0902026974065811E-4 14 1.0451013487032906E-4 15 0.005748057417868098 16 8.360810789626325E-4 17 0.0 18 2.0902026974065811E-4 19 0.0 20 5.225506743516453E-4 21 0.0 22 0.0 23 7.315709440923033E-4 24 0.0 25 0.0015676520230549357 26 0.004702956069164807 27 0.005330016878386782 28 0.0029262837763692133 29 0.001881182427665923 30 0.0035533445855911875 31 0.007524729710663692 32 0.0035533445855911875 33 0.0035533445855911875 34 0.002090202697406581 35 0.0027172635066285552 36 0.007211199306052704 37 0.0031353040461098713 38 0.008987871598848299 39 0.003762364855331846 40 0.0028217736414988845 41 0.0028217736414988845 42 0.002090202697406581 43 0.001672162157925265 44 0.0012541216184439486 45 0.0010451013487032905 46 7.315709440923033E-4 47 0.0017766722927955937 48 0.0027172635066285552 49 6.270608092219743E-4 50 0.001672162157925265 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 956845.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.9636780499343 #Duplication Level Percentage of deduplicated Percentage of total 1 79.74545698676648 47.020854517125834 2 12.386828576246115 14.60745944459004 3 3.503259179875419 6.196951392229531 4 1.4660745368767456 3.4578058795842788 5 0.7419538792525535 2.18741648320737 6 0.4617003868600721 1.6334131779808443 7 0.31475473407169463 1.2991367763147261 8 0.2200233202348979 1.0378707374246492 9 0.1591465628822877 0.8445480026890353 >10 0.8671196360854646 9.13157014510333 >50 0.06559433690003787 2.7331280354521423 >100 0.06183307344482749 7.318997013256292 >500 0.006076082203432705 2.421892726773436 >1k 1.787083001009619E-4 0.108955668268523 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1034 0.10806347945592024 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.090202697406581E-4 2 0.0 0.0 0.0 0.0 2.090202697406581E-4 3 0.0 0.0 0.0 0.0 2.090202697406581E-4 4 0.0 0.0 0.0 0.0 2.090202697406581E-4 5 0.0 0.0 0.0 0.0 4.180405394813162E-4 6 0.0 0.0 0.0 0.0 5.225506743516453E-4 7 0.0 0.0 0.0 0.0 5.225506743516453E-4 8 0.0 0.0 0.0 0.0 7.315709440923033E-4 9 0.0 0.0 0.0 0.0 7.315709440923033E-4 10 0.0 0.0 0.0 0.0 7.315709440923033E-4 11 0.0 0.0 0.0 0.0 7.315709440923033E-4 12 0.0 0.0 0.0 0.0 0.0011496114835736196 13 0.0 0.0 0.0 0.0 0.0011496114835736196 14 0.0 0.0 0.0 0.0 0.0012541216184439486 15 0.0 0.0 0.0 0.0 0.0016721621579252647 16 0.0 0.0 0.0 0.0 0.001881182427665923 17 0.0 0.0 0.0 0.0 0.001881182427665923 18 0.0 0.0 0.0 0.0 0.001881182427665923 19 0.0 0.0 0.0 0.0 0.001881182427665923 20 0.0 0.0 0.0 2.090202697406581E-4 0.001881182427665923 21 0.0 0.0 0.0 3.1353040461098715E-4 0.001881182427665923 22 0.0 0.0 0.0 5.225506743516453E-4 0.001881182427665923 23 0.0 0.0 0.0 0.0015676520230549357 0.001881182427665923 24 0.0 0.0 0.0 0.0028217736414988845 0.001881182427665923 25 0.0 0.0 0.0 0.0038668749902021748 0.001881182427665923 26 0.0 0.0 0.0 0.00438942566455382 0.001881182427665923 27 0.0 0.0 0.0 0.006061587822479085 0.001985692562536252 28 0.0 0.0 0.0 0.008465320924496653 0.001985692562536252 29 0.0 0.0 0.0 0.014631418881846067 0.001985692562536252 30 0.0 0.0 0.0 0.026127533717582262 0.001985692562536252 31 0.0 0.0 0.0 0.049955844468017284 0.001985692562536252 32 0.0 0.0 0.0 0.07786005047839514 0.001985692562536252 33 0.0 0.0 0.0 0.09991168893603457 0.001985692562536252 34 0.0 0.0 0.0 0.1284429557556344 0.002090202697406581 35 0.0 0.0 0.0 0.15843736446341883 0.002090202697406581 36 0.0 0.0 0.0 0.20818418866169547 0.002090202697406581 37 0.0 0.0 0.0 0.2781014688899456 0.002090202697406581 38 0.0 0.0 0.0 0.3719515700035011 0.002299222967147239 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGGT 30 0.005745522 29.332186 11 GTATTAA 130 6.91216E-11 22.000288 1 TATACCG 50 0.002580635 21.999138 5 TACACCG 50 0.002580635 21.999138 5 ATAATAC 95 6.865812E-7 20.841288 3 ACTGCGT 55 0.0044839573 19.999216 8 TACGCTG 55 0.0044839573 19.999216 5 TAGTACA 70 8.1237743E-4 18.856403 4 GTTATAT 95 1.5963633E-5 18.526558 1 TACACTA 60 0.0074126753 18.332615 5 GTCTTAC 85 1.4302945E-4 18.117884 1 TATACTG 85 1.4308671E-4 18.116938 5 CGATTTG 245 0.0 17.960356 28 GTCCTAA 215 0.0 17.395576 1 AGCGATT 255 0.0 17.257833 26 GCGATTT 255 0.0 17.257833 27 ATACCGT 295 0.0 17.15187 6 TAATACC 90 2.215427E-4 17.110441 4 TAGCCTA 90 2.215427E-4 17.110441 5 TTAGTTG 250 0.0 16.720219 15 >>END_MODULE