##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064077_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 583386 Sequences flagged as poor quality 0 Sequence length 25 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.171536512703426 32.0 32.0 32.0 32.0 32.0 2 30.776952138035536 32.0 32.0 32.0 32.0 32.0 3 30.803341184053096 32.0 32.0 32.0 32.0 32.0 4 30.813687678483884 32.0 32.0 32.0 32.0 32.0 5 30.72209137689283 32.0 32.0 32.0 32.0 32.0 6 34.36582125728077 36.0 36.0 36.0 32.0 36.0 7 34.26846547568848 36.0 36.0 36.0 32.0 36.0 8 34.20204118713853 36.0 36.0 36.0 32.0 36.0 9 34.35499652031417 36.0 36.0 36.0 32.0 36.0 10 34.03395007765013 36.0 36.0 36.0 32.0 36.0 11 34.404973722372496 36.0 36.0 36.0 32.0 36.0 12 34.18309489771781 36.0 36.0 36.0 32.0 36.0 13 34.255222099947545 36.0 36.0 36.0 32.0 36.0 14 34.163327539570716 36.0 36.0 36.0 32.0 36.0 15 34.10936498304724 36.0 36.0 36.0 32.0 36.0 16 34.08905938778099 36.0 36.0 36.0 32.0 36.0 17 34.01648136911067 36.0 36.0 36.0 32.0 36.0 18 34.02280651232631 36.0 36.0 36.0 32.0 36.0 19 34.01644708649162 36.0 36.0 36.0 32.0 36.0 20 33.97900360995979 36.0 36.0 36.0 32.0 36.0 21 33.971812830613004 36.0 36.0 36.0 32.0 36.0 22 33.92411885098374 36.0 36.0 36.0 32.0 36.0 23 33.86362888379221 36.0 36.0 36.0 32.0 36.0 24 33.88801239659505 36.0 36.0 36.0 32.0 36.0 25 33.4575238349909 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 1.0 4 7.0 5 15.0 6 19.0 7 9.0 8 17.0 9 30.0 10 50.0 11 21.0 12 46.0 13 26.0 14 64.0 15 136.0 16 188.0 17 246.0 18 321.0 19 463.0 20 688.0 21 1008.0 22 1538.0 23 2375.0 24 3452.0 25 5117.0 26 6998.0 27 9370.0 28 12280.0 29 16770.0 30 22099.0 31 30329.0 32 41972.0 33 58913.0 34 122632.0 35 246186.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.57428302935104 17.036669936276898 11.384759958020949 25.00428707635112 2 15.406610473697475 20.265810915287126 39.665413553168186 24.662165057847215 3 19.028689852359623 25.863035395636096 28.396902860414446 26.71137189158983 4 11.813218366174972 15.810612748669337 36.6150971535343 35.7610717316214 5 13.051296952491647 38.49971456930823 34.05968158620607 14.389306891994055 6 32.36277856162 36.08979117414612 18.143385409791378 13.404044854442498 7 28.94209865790683 31.105255217155747 21.624536233772467 18.328109891164953 8 27.805203423223528 33.91947434211316 19.865121837882143 18.410200396781168 9 28.076466633739432 13.91792887718143 18.825458237295578 39.18014625178356 10 15.480739546530376 27.673995815181975 32.893184234898634 23.95208040338902 11 36.15034344369838 21.175683671631806 23.64710624029911 19.026866644370696 12 25.098882024225666 23.929621383902383 30.29717778867891 20.67431880319304 13 30.32356109308213 20.615013070056875 25.493643355539852 23.56778248132114 14 22.967910586007452 20.538048288495975 26.62917069756911 29.864870427927464 15 24.14015480901 28.871897516641198 24.003114703768688 22.98483297058011 16 23.559368841028423 26.19097035803297 26.891838810547675 23.35782199039093 17 22.410880143806164 26.702080764038854 27.210650987037894 23.67638810511709 18 23.089604394360205 25.170303759119893 29.52006161985422 22.22003022666568 19 24.47905855712901 25.590674775060684 27.03989295547531 22.890373712334995 20 25.01921361421807 24.690695121114388 27.58080010979208 22.709291154875455 21 25.41712270252281 24.7336693416958 25.771372499236605 24.077835456544786 22 24.714623426440262 26.060448024923062 26.058389402210274 23.166539146426402 23 22.7796697405104 26.078490242333263 27.121938666094792 24.01990135106155 24 23.789673043173945 26.1923999993138 27.21346460326528 22.804462354246972 25 23.787524510266437 25.81730909440248 27.03943429533091 23.35573210000017 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 142.0 1 142.0 2 343.0 3 544.0 4 544.0 5 544.0 6 1806.0 7 3068.0 8 3068.0 9 3068.0 10 2841.0 11 2614.0 12 2614.0 13 2614.0 14 2239.5 15 1865.0 16 1865.0 17 1865.0 18 3225.5 19 4586.0 20 4586.0 21 4586.0 22 7537.0 23 10488.0 24 10488.0 25 10488.0 26 16307.5 27 22127.0 28 22127.0 29 22127.0 30 27923.5 31 33720.0 32 33720.0 33 33720.0 34 37946.0 35 42172.0 36 42172.0 37 42172.0 38 46511.0 39 50850.0 40 50850.0 41 50850.0 42 57570.5 43 64291.0 44 64291.0 45 64291.0 46 74795.5 47 85300.0 48 85300.0 49 85300.0 50 82214.0 51 79128.0 52 79128.0 53 79128.0 54 68833.5 55 58539.0 56 58539.0 57 58539.0 58 52709.0 59 46879.0 60 46879.0 61 46879.0 62 40500.5 63 34122.0 64 34122.0 65 34122.0 66 27758.0 67 21394.0 68 21394.0 69 21394.0 70 15988.5 71 10583.0 72 10583.0 73 10583.0 74 7974.5 75 5366.0 76 5366.0 77 5366.0 78 4151.0 79 2936.0 80 2936.0 81 2936.0 82 2050.5 83 1165.0 84 1165.0 85 1165.0 86 925.0 87 685.0 88 685.0 89 685.0 90 487.5 91 290.0 92 290.0 93 290.0 94 206.5 95 123.0 96 123.0 97 123.0 98 266.0 99 409.0 100 409.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.040796316675408735 2 0.006685110715718238 3 0.0015427178574734396 4 0.005313805953519625 5 0.009770546430665116 6 0.01319880833616165 7 0.02022674524242954 8 0.033082727388041536 9 0.04833849286750111 10 0.05588066905959347 11 0.05502360358321934 12 0.0630800190611362 13 0.06410849763278516 14 0.06685110715718237 15 0.059137517869815186 16 0.06770817263355651 17 0.0649655631091593 18 0.07833578454059577 19 0.0773073059689468 20 0.07987850239806919 21 0.07953567620751954 22 0.08090698096971816 23 0.0875920916854364 24 0.07970708930279438 25 0.08004991549334403 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 583386.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.06394847279955 #Duplication Level Percentage of deduplicated Percentage of total 1 79.7381299132605 47.096487965142146 2 13.125301514237735 15.504642646537912 3 3.608481104065507 6.393934259867878 4 1.3428532285870443 3.172568555991908 5 0.6077179704529669 1.794711144641418 6 0.3425969886666071 1.2141078531324463 7 0.20529338423889085 0.8487806507944741 8 0.13639521238838714 0.6444831837155398 9 0.11058944991483977 0.5878664614264808 >10 0.6225566443998243 7.07687950974626 >50 0.08864429712727108 3.5545802928721995 >100 0.06444205991005371 7.106748425698125 >500 0.00379070940647347 1.6166888200859244 >1k 0.0032075233439390898 3.387520230347294 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3279 0.5620635394061564 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2569 0.44036024176102956 No Hit TATCAACGCAGAGTACTTTTTTTTT 2473 0.4239045846146462 No Hit GTACATGGAAGCAGTGGTATCAACG 1882 0.32259944530722373 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1706 0.2924307405388542 No Hit GTACATGGGGTGGTATCAACGCAAA 1627 0.2788891060121429 No Hit TCCATGTACTCTGCGTTGATACCAC 1565 0.26826149410510364 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1367 0.23432170124068796 No Hit GGTATCAACGCAGAGTACTTTTTTT 1183 0.2027816917101199 No Hit GTCCTAAAGTGTGTATTTCTCATTT 1017 0.17432711789449867 No Hit CCCATGTACTCTGCGTTGATACCAC 1001 0.17158450837010145 No Hit GTACATGGGAAGCAGTGGTATCAAC 909 0.15581450360481738 No Hit CTGTAGGACGTGGAATATGGCAAGA 844 0.14467265241195365 No Hit GTACATGGGTGGTATCAACGCAAAA 831 0.14244428217338093 No Hit GTCCTACAGTGGACATTTCTAAATT 829 0.14210145598283125 No Hit GTATCAACGCAGAGTACATGGGGTG 817 0.14004449883953335 No Hit GTACATGGGAGTGGTATCAACGCAA 715 0.12256036312150104 No Hit CTTTAGGACGTGAAATATGGCGAGG 708 0.12136047145457725 No Hit GAGTACATGGAAGCAGTGGTATCAA 701 0.12016057978765345 No Hit GCAGAGTACTTTTTTTTTTTTTTTT 677 0.11604666550105762 No Hit CATGTACTCTGCGTTGATACCACTG 661 0.1133040559766604 No Hit GTATCAACGCAGAGTACATGGGAAG 636 0.10901872859478974 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 1.714130952748266E-4 0.0 13 0.0 0.0 0.0 5.142392858244799E-4 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTAAC 55 5.8926344E-7 17.273117 11 GTATTAG 55 5.903239E-7 17.270153 1 AATACTG 45 3.5424942E-5 16.883474 5 GTTACGC 35 0.0021676836 16.286081 9 TCGCGTA 65 1.9067738E-7 16.077288 9 TCGGGGG 65 1.9198524E-7 16.067633 2 CGCGTAA 70 4.4167246E-7 14.93019 10 CGGCTCG 40 0.005273073 14.250321 8 CTAGGAC 60 2.5747546E-5 14.242988 3 GTCGCGT 75 9.640407E-7 13.933647 8 TAGGACT 55 1.9636039E-4 13.812566 4 GATTAAG 125 7.2759576E-12 13.677961 1 TCGCCAG 85 2.6800808E-7 13.415522 17 CTTTCGT 50 0.0014944272 13.303725 16 GTAAGAC 50 0.0015031525 13.293455 3 CTTAATG 50 0.0015041246 13.292315 2 TATTAGC 50 0.0015041246 13.292315 2 ATACTGT 65 5.4530894E-5 13.150758 6 TCTAGGA 65 5.4706805E-5 13.146245 2 CGCATCG 80 1.9889467E-6 13.065038 13 >>END_MODULE