##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064077_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 583386 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.153174741937583 32.0 32.0 32.0 32.0 32.0 2 31.41514366131515 32.0 32.0 32.0 32.0 32.0 3 31.49526728443946 32.0 32.0 32.0 32.0 32.0 4 31.593497272817654 32.0 32.0 32.0 32.0 32.0 5 31.53722406776988 32.0 32.0 32.0 32.0 32.0 6 35.11976461553757 36.0 36.0 36.0 36.0 36.0 7 35.14864257969852 36.0 36.0 36.0 36.0 36.0 8 35.111691058750125 36.0 36.0 36.0 36.0 36.0 9 35.20136239128124 36.0 36.0 36.0 36.0 36.0 10 35.0760285642782 36.0 36.0 36.0 36.0 36.0 11 35.20638650910375 36.0 36.0 36.0 36.0 36.0 12 35.12945802607536 36.0 36.0 36.0 36.0 36.0 13 35.1564281624859 36.0 36.0 36.0 36.0 36.0 14 35.09507598742513 36.0 36.0 36.0 36.0 36.0 15 35.07588457727817 36.0 36.0 36.0 36.0 36.0 16 35.079940211112365 36.0 36.0 36.0 36.0 36.0 17 35.054471653416435 36.0 36.0 36.0 36.0 36.0 18 35.04068832642538 36.0 36.0 36.0 36.0 36.0 19 35.03591275759103 36.0 36.0 36.0 36.0 36.0 20 35.018764591539735 36.0 36.0 36.0 36.0 36.0 21 35.007986136108855 36.0 36.0 36.0 36.0 36.0 22 34.98599212185414 36.0 36.0 36.0 36.0 36.0 23 34.93879181193927 36.0 36.0 36.0 36.0 36.0 24 34.917572584875195 36.0 36.0 36.0 36.0 36.0 25 34.88004511592668 36.0 36.0 36.0 32.0 36.0 26 34.81168557353107 36.0 36.0 36.0 32.0 36.0 27 34.80336689601739 36.0 36.0 36.0 32.0 36.0 28 34.77271823458225 36.0 36.0 36.0 32.0 36.0 29 34.73833962419393 36.0 36.0 36.0 32.0 36.0 30 34.70512833698443 36.0 36.0 36.0 32.0 36.0 31 34.65760234218853 36.0 36.0 36.0 32.0 36.0 32 34.6196909079066 36.0 36.0 36.0 32.0 36.0 33 34.59262992255557 36.0 36.0 36.0 32.0 36.0 34 34.550249748879814 36.0 36.0 36.0 32.0 36.0 35 34.48378774944891 36.0 36.0 36.0 32.0 36.0 36 34.435610384890964 36.0 36.0 36.0 32.0 36.0 37 34.38983966019068 36.0 36.0 36.0 32.0 36.0 38 34.32724302605822 36.0 36.0 36.0 32.0 36.0 39 34.258050416019586 36.0 36.0 36.0 32.0 36.0 40 34.20335935384119 36.0 36.0 36.0 32.0 36.0 41 34.18385768599178 36.0 36.0 36.0 32.0 36.0 42 34.08397698950609 36.0 36.0 36.0 32.0 36.0 43 34.05827873826249 36.0 36.0 36.0 32.0 36.0 44 33.988465612818956 36.0 36.0 36.0 32.0 36.0 45 33.86719599030488 36.0 36.0 36.0 32.0 36.0 46 33.82894001570144 36.0 36.0 36.0 32.0 36.0 47 33.74195986876614 36.0 36.0 36.0 27.0 36.0 48 33.6954109286133 36.0 36.0 36.0 27.0 36.0 49 33.64367502819746 36.0 36.0 36.0 27.0 36.0 50 33.065424950204495 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 0.0 19 4.0 20 3.0 21 18.0 22 67.0 23 203.0 24 564.0 25 1460.0 26 2769.0 27 5141.0 28 8298.0 29 12328.0 30 16864.0 31 22643.0 32 32228.0 33 49212.0 34 98033.0 35 333549.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.975777170540375 17.90843667607237 11.82410077245626 25.291685380930996 2 14.753061448377055 21.033144549730537 39.011354442357 25.2024395595354 3 18.428621872996608 26.28516968182301 28.682381819241463 26.603826625938915 4 11.558385014381559 16.314926995162722 36.83204602098782 35.2946419694679 5 12.788788212264265 38.67919353566935 33.86419968939947 14.667818562666913 6 32.504778148221156 36.58270267490594 17.683005219537698 13.229513957335207 7 28.76145255705923 31.480068908182417 21.473983732869375 18.284494801888975 8 27.663330967832618 34.104178022784225 19.7469599887553 18.485531020627853 9 27.923651822139945 13.777983475607666 18.800267407178854 39.498097295073535 10 15.419333605312508 27.85055315764393 32.84834189839178 23.881771338651784 11 36.130452222027955 21.2300260890731 23.62089594196638 19.018625746932564 12 24.956889606538383 24.14593425279318 30.448450939858002 20.44872520081044 13 30.509973722237365 20.56093509752598 25.46697452616892 23.46211665406774 14 22.929322710256024 20.587983215172166 26.697509702014454 29.785184372557357 15 24.13564342687875 28.87291228467155 24.017018854792894 22.97442543365681 16 23.49275948603321 26.399764134772298 26.74481987850198 23.36265650069251 17 22.32381305002177 26.814664733126953 27.208572026068506 23.652950190782775 18 23.22843958696159 25.09976276346283 29.617027549607123 22.05477009996846 19 24.758907481495957 25.424161704257557 27.122008412954717 22.69492240129177 20 25.135588223194326 24.640545506904544 27.772959148691083 22.450907121210044 21 25.620258285251964 24.584237537410907 25.964284367468537 23.831219809868596 22 24.719825295773294 25.875663797211452 26.36676231517383 23.03774859184142 23 22.77288481910528 25.89898830603828 27.374361048925394 23.953765825931043 24 23.89035732773841 25.88800554007124 27.41409632730302 22.80754080488733 25 23.820396520928256 25.530620151052325 27.27924110433444 23.369742223684977 26 22.45783413416622 26.488683485585867 28.057893103808855 22.99558927643906 27 23.603285157649513 26.405885993167068 27.107007616340763 22.883821232842664 28 22.743074602303896 25.963384530992865 27.392347778387272 23.901193088315964 29 23.123021199202565 26.0204912482794 27.254011598108235 23.6024759544098 30 22.933458583462183 26.016771632217168 27.915236746742185 23.134533037578468 31 23.786854641983478 25.632608140378068 26.71516905264349 23.86536816499497 32 22.762421468548848 26.873912559032508 26.81700136278316 23.546664609635474 33 22.360580648257987 26.476305738598573 27.63719083634469 23.525922776798755 34 23.10813451589568 26.474803125310697 27.74313209888818 22.673930259905443 35 23.596052611279575 26.443630404561063 27.348026048514416 22.612290935644946 36 22.786313914598253 26.87983104106203 27.391713537800623 22.9421415065391 37 23.425471188706897 27.008305263428557 26.311485947905684 23.25473759995886 38 23.070975749409424 27.226627991894752 26.47078991850183 23.23160634019399 39 23.845040918550314 26.297582599930745 26.527460169982547 23.32991631153639 40 24.403426281298586 26.480485041302902 26.641959775306706 22.4741289020918 41 23.31072336471988 26.499431750978363 27.334749241906092 22.85509564239566 42 23.976687379472892 27.705335333190483 26.655753160488537 21.66222412684808 43 23.046635286212368 26.77354991103538 26.83783070324901 23.34198409950324 44 22.53423589124737 27.31414740674587 26.711623147216475 23.43999355479028 45 23.035532768689887 27.361380376668947 26.27734723857814 23.325739616063025 46 22.87184532921024 26.47943625178057 26.621710340240767 24.027008078768418 47 24.05685604969762 26.350605449733273 26.62350351750525 22.969034983063864 48 23.385118560915778 27.54267867274856 25.435786146380263 23.636416619955398 49 23.279612469274202 27.000647941500137 26.277798918726198 23.441940670499463 50 22.919616440798247 28.358457123854514 25.176300786111234 23.545625649236 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 49.0 1 39.0 2 29.0 3 120.5 4 212.0 5 228.0 6 244.0 7 243.0 8 242.0 9 319.0 10 396.0 11 634.5 12 873.0 13 1482.5 14 2092.0 15 2874.0 16 3656.0 17 3986.0 18 4316.0 19 4434.5 20 4553.0 21 4769.5 22 4986.0 23 5276.5 24 5567.0 25 5429.0 26 5291.0 27 6133.0 28 6975.0 29 8386.5 30 9798.0 31 11646.5 32 13495.0 33 16658.0 34 19821.0 35 22954.5 36 26088.0 37 27407.0 38 28726.0 39 28860.5 40 28995.0 41 30071.0 42 31147.0 43 31684.5 44 32222.0 45 35129.5 46 38037.0 47 40592.0 48 43147.0 49 43545.0 50 43943.0 51 41319.5 52 38696.0 53 37167.0 54 35638.0 55 35092.5 56 34547.0 57 33063.0 58 31579.0 59 28707.5 60 25836.0 61 22512.5 62 19189.0 63 16422.5 64 13656.0 65 11455.5 66 9255.0 67 8067.0 68 6879.0 69 5954.5 70 5030.0 71 3973.0 72 2916.0 73 2496.5 74 2077.0 75 1583.0 76 1089.0 77 946.5 78 804.0 79 670.0 80 536.0 81 434.5 82 333.0 83 272.5 84 212.0 85 160.0 86 108.0 87 75.0 88 42.0 89 30.0 90 18.0 91 16.0 92 14.0 93 14.5 94 15.0 95 10.5 96 6.0 97 5.5 98 5.0 99 5.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008913480954290984 2 3.4282619054965327E-4 3 0.0 4 0.0 5 0.0 6 1.7141309527482664E-4 7 1.7141309527482664E-4 8 0.0 9 0.0010284785716489597 10 0.001371304762198613 11 0.0 12 0.0 13 5.142392858244799E-4 14 3.4282619054965327E-4 15 0.005656632144069278 16 3.4282619054965327E-4 17 0.0 18 3.4282619054965327E-4 19 0.0 20 3.4282619054965327E-4 21 0.0 22 0.0 23 0.001371304762198613 24 0.0 25 0.0020569571432979194 26 0.005999458334618932 27 0.005999458334618932 28 0.004456740477145492 29 0.0025711964291223995 30 0.0034282619054965325 31 0.008056415477916851 32 0.0035996750007713588 33 0.006513697620443411 34 0.0034282619054965325 35 0.002228370238572746 36 0.008399241668466503 37 0.0035996750007713588 38 0.010284785716489598 39 0.005485219048794452 40 0.002228370238572746 41 0.0025711964291223995 42 0.001885544048023093 43 0.001371304762198613 44 0.0011998916669237864 45 0.0015427178574734396 46 8.570654763741331E-4 47 0.003085435714946879 48 0.0025711964291223995 49 0.0 50 0.001371304762198613 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 583386.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.28614977388332 #Duplication Level Percentage of deduplicated Percentage of total 1 80.88788541703794 52.8085860222945 2 12.54683480127135 16.38269072047946 3 3.4298021670237997 6.717557339133159 4 1.2178376213033557 3.180317173787227 5 0.5857740462895034 1.9121466059855086 6 0.29599719197991525 1.1594710204949785 7 0.1915725361828676 0.8754923302858163 8 0.13993218947393687 0.7308507104146289 9 0.09044204667815468 0.5314151704757898 >10 0.5003399712320735 6.316940720666736 >50 0.06762093451034158 3.0502886349009426 >100 0.04411206817125389 5.425606996927221 >500 0.0015848647247141481 0.7220461666811298 >1k 2.6414412078569136E-4 0.18659038747288811 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1082 0.1854689690873624 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 896 0.15358613336624466 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 841 0.14415841312612918 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 790 0.13541634526711302 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA 630 0.10799025002314078 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 1.714130952748266E-4 0.0 13 0.0 0.0 0.0 5.142392858244799E-4 0.0 14 0.0 0.0 0.0 6.856523810993064E-4 0.0 15 0.0 0.0 0.0 8.570654763741331E-4 0.0 16 0.0 0.0 0.0 8.570654763741331E-4 0.0 17 0.0 0.0 0.0 0.0010284785716489597 0.0 18 0.0 0.0 0.0 0.0011998916669237864 0.0 19 0.0 0.0 0.0 0.0011998916669237864 0.0 20 0.0 0.0 0.0 0.0011998916669237864 0.0 21 0.0 0.0 0.0 0.0020569571432979194 0.0 22 0.0 0.0 0.0 0.0042853273818706655 0.0 23 0.0 0.0 0.0 0.006685110715718238 0.0 24 0.0 0.0 0.0 0.01062761190703925 0.0 25 0.0 0.0 0.0 0.013370221431436477 0.0 26 0.0 0.0 0.0 0.016284244051108527 0.0 27 0.0 0.0 0.0 0.019369679766055407 0.0 28 0.0 0.0 0.0 0.025711964291223993 0.0 29 0.0 0.0 0.0 0.03496827143606463 0.0 30 0.0 0.0 0.0 0.052966646439921425 0.0 31 0.0 0.0 0.0 0.08656361311378744 0.0 32 0.0 0.0 0.0 0.1263314512175472 0.0 33 0.0 0.0 0.0 0.15804287384339014 0.0 34 0.0 0.0 0.0 0.19215407980308064 0.0 35 0.0 0.0 0.0 0.23346463576431384 0.0 36 0.0 0.0 0.0 0.28951671791918215 0.0 37 0.0 0.0 0.0 0.37385196079439686 0.0 38 0.0 0.0 0.0 0.4816707977222628 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTAAT 35 3.2153592E-4 31.429367 27 CGTAATT 35 3.2153592E-4 31.429367 28 TCCGTAA 45 0.0013964435 24.447159 26 CGCGTAA 55 1.5919658E-4 24.00061 10 TCGCGTA 55 1.5919658E-4 24.00061 9 GACGTGA 345 0.0 22.953169 7 CGTCGTA 70 3.211048E-5 22.000557 10 CGGTTGG 50 0.002579757 21.99867 40 TAATACC 70 3.2153013E-5 21.996786 4 TAGGACG 695 0.0 21.838535 4 TTAGGAC 455 0.0 21.755062 3 GTCCTAA 405 0.0 21.183905 1 CGACCAT 115 8.745701E-9 21.044012 10 AGGACGT 705 0.0 20.904747 5 ATAGCGT 95 6.863411E-7 20.83906 6 GCGTAAC 75 5.4653494E-5 20.533854 11 GATATAC 140 1.8371793E-10 20.427338 1 TTTAGGA 500 0.0 20.237043 2 GTCCTAC 625 0.0 20.062788 1 ACTATCC 55 0.0044846684 19.99708 8 >>END_MODULE