##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064076_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2375384 Sequences flagged as poor quality 0 Sequence length 50 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.3798888937536 32.0 32.0 32.0 32.0 32.0 2 31.457920487803236 32.0 32.0 32.0 32.0 32.0 3 31.521171313774953 32.0 32.0 32.0 32.0 32.0 4 31.59031550267241 32.0 32.0 32.0 32.0 32.0 5 31.57307071193542 32.0 32.0 32.0 32.0 32.0 6 35.15969333800346 36.0 36.0 36.0 36.0 36.0 7 35.177633595241865 36.0 36.0 36.0 36.0 36.0 8 35.11634371537402 36.0 36.0 36.0 36.0 36.0 9 35.21866443488716 36.0 36.0 36.0 36.0 36.0 10 35.10491693132563 36.0 36.0 36.0 36.0 36.0 11 35.22329694904066 36.0 36.0 36.0 36.0 36.0 12 35.15071584215436 36.0 36.0 36.0 36.0 36.0 13 35.183809438810734 36.0 36.0 36.0 36.0 36.0 14 35.13021684072975 36.0 36.0 36.0 36.0 36.0 15 35.111656473227065 36.0 36.0 36.0 36.0 36.0 16 35.136998060103124 36.0 36.0 36.0 36.0 36.0 17 35.128222636845244 36.0 36.0 36.0 36.0 36.0 18 35.12272668334888 36.0 36.0 36.0 36.0 36.0 19 35.09550834728196 36.0 36.0 36.0 36.0 36.0 20 35.0812984342742 36.0 36.0 36.0 36.0 36.0 21 35.0647735271434 36.0 36.0 36.0 36.0 36.0 22 35.02820259797995 36.0 36.0 36.0 36.0 36.0 23 35.015498125776716 36.0 36.0 36.0 36.0 36.0 24 34.99989306992048 36.0 36.0 36.0 36.0 36.0 25 34.955330169774655 36.0 36.0 36.0 36.0 36.0 26 34.91270127272054 36.0 36.0 36.0 36.0 36.0 27 34.865897471735096 36.0 36.0 36.0 36.0 36.0 28 34.81188388908909 36.0 36.0 36.0 32.0 36.0 29 34.78876215382439 36.0 36.0 36.0 32.0 36.0 30 34.747869397116425 36.0 36.0 36.0 32.0 36.0 31 34.74089662976596 36.0 36.0 36.0 32.0 36.0 32 34.71098567642116 36.0 36.0 36.0 32.0 36.0 33 34.748131670500435 36.0 36.0 36.0 32.0 36.0 34 34.73767862375094 36.0 36.0 36.0 32.0 36.0 35 34.71173334500864 36.0 36.0 36.0 32.0 36.0 36 34.647031806225854 36.0 36.0 36.0 32.0 36.0 37 34.572291048520995 36.0 36.0 36.0 32.0 36.0 38 34.53727271043334 36.0 36.0 36.0 32.0 36.0 39 34.4087768546054 36.0 36.0 36.0 32.0 36.0 40 34.482942126409874 36.0 36.0 36.0 32.0 36.0 41 34.47446012939382 36.0 36.0 36.0 32.0 36.0 42 34.46420326145162 36.0 36.0 36.0 32.0 36.0 43 34.4667009628759 36.0 36.0 36.0 32.0 36.0 44 34.37491622407156 36.0 36.0 36.0 32.0 36.0 45 34.35565618022181 36.0 36.0 36.0 32.0 36.0 46 34.231902715518835 36.0 36.0 36.0 32.0 36.0 47 34.25696308470546 36.0 36.0 36.0 32.0 36.0 48 34.21493619557933 36.0 36.0 36.0 32.0 36.0 49 34.17576989657251 36.0 36.0 36.0 32.0 36.0 50 33.71298745802784 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 0.0 17 1.0 18 2.0 19 3.0 20 7.0 21 63.0 22 192.0 23 588.0 24 1532.0 25 3683.0 26 7747.0 27 14890.0 28 25430.0 29 39978.0 30 58305.0 31 83054.0 32 120328.0 33 192324.0 34 398807.0 35 1428449.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.52986255369062 20.592737735466166 12.701005649251298 26.176394061591914 2 12.130642219137794 21.357193165031344 45.1672221583726 21.34494245745826 3 18.103690706129395 26.34273705339627 30.252650953198067 25.300921287276267 4 10.390193753936206 18.227958090144583 40.45897421216949 30.922873943749728 5 10.834627159229834 40.50679805875597 36.68042724881535 11.978147533198841 6 30.216946432548237 40.12946986565091 18.484965978060764 11.168617723740084 7 27.120468572857515 31.919568339084687 22.915336179470845 18.044626908586952 8 22.947068768670665 42.13209316893605 20.039117885781835 14.881720176611445 9 26.378656504540793 14.589686766951985 20.55203514757367 38.479621580933554 10 14.048427144999373 30.178052860995503 35.60678330292394 20.16673669108119 11 34.194092407795964 21.28977883154892 27.558070610899122 16.958058149756 12 24.654655400544165 24.379415344317394 33.836761344811634 17.129167910326807 13 30.17969395951455 22.934849783528644 26.03331183494627 20.852144422010532 14 19.198839090031143 24.68360825098153 27.71786216762132 28.399690491366 15 20.558070569037646 36.98536305656865 22.47038362878485 19.986182745608854 16 19.561044117869937 28.548887665216782 32.01589314311406 19.874175073799215 17 19.531999878756444 31.12759873771988 29.517038087315566 19.823363296208107 18 19.60330557637094 27.803719825880492 34.48753462603878 18.10543997170979 19 24.029630577624502 26.22249707836712 27.44318392310464 22.304688420903737 20 24.2022071546027 28.63924969878326 28.711575395118054 18.44696775149598 21 22.32628492908936 26.98755232838143 26.57317722103037 24.11298552149884 22 23.232156539164258 31.12112588301661 27.058954777761873 18.587762800057252 23 20.1465458992618 30.876896813752836 29.00817348070718 19.968383806278194 24 23.513508393411566 27.43432089670052 29.95872230700416 19.093448402883755 25 21.496717949063378 29.663366653419466 29.384207087478696 19.45570831003846 26 18.54533987805068 31.212096079190015 30.65417562537654 19.588388417382767 27 20.026439377832602 30.283949655719727 29.211723422215393 20.477887544232278 28 19.113463666947474 30.801051998304207 27.800785504416513 22.284698830331802 29 21.04266951146916 28.311355999134435 27.305683514599682 23.340290974796723 30 19.421723328305195 28.877459216713348 29.479783387270402 22.221034067711052 31 23.21204532785905 27.188000478269874 28.34932057048839 21.25063362338268 32 20.50005241418913 30.335817078268906 28.662983499844863 20.5011470076971 33 19.251927878788134 30.53624437381882 30.688815924360885 19.523011823032157 34 20.61687792276901 30.194929853543695 30.278623980977688 18.9095682427096 35 19.875874193586412 30.75102764581962 29.874855388636202 19.49824277195777 36 18.788520521472975 29.71793894817057 31.09858348472441 20.394957045632044 37 19.783867664938885 29.402089164165936 27.572975922239852 23.24106724865533 38 20.603279108158027 31.391505372767732 27.658081212721857 20.347134306352384 39 22.87779240057829 27.62235789711218 28.489158779195435 21.0106909231141 40 23.822532522835765 27.57872481772014 29.54396671453368 19.054775944910414 41 23.158839544665557 26.698926329163914 30.5633919628983 19.57884216327223 42 21.146242396890724 30.726117985437057 29.59099818805192 18.5366414296203 43 19.18006257598874 30.706270060184764 30.409345646455765 19.704321717370732 44 18.645320777720524 30.670064899854843 29.352281261892976 21.33233306053166 45 19.244449776980705 30.79257626754738 28.93011781396886 21.03285614150306 46 20.157037315201617 27.66386049435054 29.466240681934813 22.71286150851303 47 22.961283048925164 27.70868363376726 28.825364936922764 20.504668380384803 48 19.679961605496477 29.092087869526047 28.57822459100592 22.649725933971556 49 22.041964848408817 28.05164166072724 28.37672799468209 21.529665496181856 50 19.8323782452087 31.60198000461406 27.47294291194385 21.092698838233385 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 2.5 2 5.0 3 20.0 4 35.0 5 45.0 6 55.0 7 76.5 8 98.0 9 145.0 10 192.0 11 314.5 12 437.0 13 829.5 14 1222.0 15 1730.5 16 2239.0 17 2765.5 18 3292.0 19 4114.5 20 4937.0 21 6764.5 22 8592.0 23 11643.5 24 14695.0 25 20654.0 26 26613.0 27 38677.0 28 50741.0 29 66013.0 30 81285.0 31 101412.0 32 121539.0 33 151730.0 34 181921.0 35 212772.0 36 243623.0 37 244624.5 38 245626.0 39 227726.5 40 209827.0 41 194250.5 42 178674.0 43 167595.0 44 156516.0 45 153235.0 46 149954.0 47 145694.5 48 141435.0 49 135639.0 50 129843.0 51 118583.0 52 107323.0 53 97223.0 54 87123.0 55 78012.0 56 68901.0 57 60149.5 58 51398.0 59 43388.5 60 35379.0 61 29613.0 62 23847.0 63 19606.0 64 15365.0 65 12638.5 66 9912.0 67 8726.5 68 7541.0 69 6666.0 70 5791.0 71 4417.5 72 3044.0 73 2410.5 74 1777.0 75 1503.5 76 1230.0 77 1071.0 78 912.0 79 866.5 80 821.0 81 663.5 82 506.0 83 503.5 84 501.0 85 411.5 86 322.0 87 240.5 88 159.0 89 112.0 90 65.0 91 49.0 92 33.0 93 24.0 94 15.0 95 12.5 96 10.0 97 9.0 98 8.0 99 6.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008503888213442543 2 4.6308302152409884E-4 3 5.051814780262896E-4 4 0.0 5 0.0 6 2.10492282510954E-4 7 4.20984565021908E-5 8 0.0 9 0.0011787567820613425 10 9.261660430481977E-4 11 0.0 12 1.262953695065724E-4 13 5.051814780262896E-4 14 2.525907390131448E-4 15 0.003915156454703745 16 8.41969130043816E-4 17 0.0 18 1.683938260087632E-4 19 0.0 20 7.577722170394345E-4 21 0.0 22 1.683938260087632E-4 23 7.998706735416253E-4 24 3.7888610851971724E-4 25 0.001683938260087632 26 0.005683291627795759 27 0.0058516854538045214 28 0.003999353367708126 29 0.0024417104771270667 30 0.003578368802686218 31 0.006567359214341765 32 0.0030731873246599285 33 0.004420337932730034 34 0.0028626950421489746 35 0.0021891197381139218 36 0.007956608278914062 37 0.003367876520175264 38 0.0069462453228614825 39 0.004125648737214699 40 0.0022312181946161124 41 0.00315738423766431 42 0.001683938260087632 43 0.0013471506080701056 44 0.0013471506080701056 45 0.0012208552385635334 46 0.00105246141255477 47 0.001768135173092014 48 0.0018523320860963954 49 6.31476847532862E-4 50 0.001515544434078869 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2375384.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.47480576632333 #Duplication Level Percentage of deduplicated Percentage of total 1 72.06984310747538 39.98060547996593 2 15.664920473237883 17.380168411955466 3 5.800503897969376 9.653454812599577 4 2.596449453608798 5.761501164840976 5 1.3496216010533029 3.743499808823315 6 0.7329705004573609 2.439683768719014 7 0.4581912890037943 1.7792650932914766 8 0.29741950271317846 1.319943131530404 9 0.1926250341859557 0.9617252721477555 >10 0.7415472379089152 7.045050153912705 >50 0.05092279762856995 1.974877187548435 >100 0.03933870269028082 4.370871171947155 >500 0.0038151365319770477 1.456110431613657 >1k 0.0017549628047077606 1.869832040873706 >5k 7.630273063946786E-5 0.26341207023038604 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 6223 0.26197869481313335 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 4581 0.19285302923653608 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 4454 0.18750652526075784 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 4114 0.17319305005001295 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 2818 0.11863345042317369 No Hit GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCAGTGATTTCGTCA 2413 0.10158357553978642 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 4.20984565021908E-5 0.0 18 0.0 0.0 0.0 1.262953695065724E-4 0.0 19 0.0 0.0 0.0 1.262953695065724E-4 0.0 20 0.0 0.0 0.0 2.10492282510954E-4 0.0 21 0.0 0.0 0.0 2.525907390131448E-4 0.0 22 0.0 0.0 0.0 2.525907390131448E-4 0.0 23 0.0 0.0 0.0 3.367876520175264E-4 0.0 24 0.0 0.0 0.0 4.6308302152409884E-4 0.0 25 0.0 0.0 0.0 4.6308302152409884E-4 0.0 26 0.0 0.0 0.0 7.156737605372436E-4 0.0 27 0.0 0.0 0.0 9.261660430481977E-4 0.0 28 0.0 0.0 0.0 0.00210492282510954 0.0 29 0.0 0.0 0.0 0.004588731758738798 0.0 30 0.0 0.0 0.0 0.010145728017027983 0.0 31 0.0 0.0 0.0 0.027616587465437166 0.0 32 0.0 0.0 0.0 0.04891840645554572 0.0 33 0.0 0.0 0.0 0.06975714242413016 0.0 34 0.0 0.0 0.0 0.09211142282679348 0.0 35 0.0 0.0 0.0 0.12027529022675913 0.0 36 0.0 0.0 0.0 0.15909006712177906 0.0 37 0.0 0.0 0.0 0.2229113271791003 0.0 38 0.0 0.0 0.0 0.31013932905163966 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 990 0.0 29.332 1 GTATCAA 2885 0.0 28.747393 1 TAGGACC 3240 0.0 26.208685 4 TAGTACG 110 2.0190782E-10 23.99891 4 GGACCTG 4945 0.0 23.133429 6 AGGACCT 5240 0.0 22.628744 5 GTAGGAC 8345 0.0 22.354414 3 CTGTAGG 8370 0.0 22.182981 1 TGTAGGA 8685 0.0 22.086723 2 TTAGGAC 4655 0.0 21.596846 3 GTCCTAC 7330 0.0 21.158655 1 GACCTGG 5355 0.0 21.116198 7 CGATCGC 95 6.8722693E-7 20.842035 10 TAGGACG 8280 0.0 20.82997 4 GATATAC 2165 0.0 20.72885 1 AGGACGT 8190 0.0 20.521656 5 GGACGTG 8105 0.0 20.384022 6 GACCGGG 65 4.934902E-4 20.307198 7 GACGTGA 4400 0.0 20.149508 7 CTTTAGG 4860 0.0 20.143118 1 >>END_MODULE