##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064075_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2144887 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.23117348373131 32.0 32.0 32.0 32.0 32.0 2 30.87560137200701 32.0 32.0 32.0 32.0 32.0 3 30.899871182024974 32.0 32.0 32.0 32.0 32.0 4 30.918688956574403 32.0 32.0 32.0 32.0 32.0 5 30.844943812890843 32.0 32.0 32.0 32.0 32.0 6 34.49304042590589 36.0 36.0 36.0 32.0 36.0 7 34.41662847506652 36.0 36.0 36.0 32.0 36.0 8 34.370677336381824 36.0 36.0 36.0 32.0 36.0 9 34.49003793673047 36.0 36.0 36.0 32.0 36.0 10 34.22603801505627 36.0 36.0 36.0 32.0 36.0 11 34.49677628704915 36.0 36.0 36.0 32.0 36.0 12 34.31785450702065 36.0 36.0 36.0 32.0 36.0 13 34.3921386068357 36.0 36.0 36.0 32.0 36.0 14 34.3012391794999 36.0 36.0 36.0 32.0 36.0 15 34.25162397832613 36.0 36.0 36.0 32.0 36.0 16 34.250102219837224 36.0 36.0 36.0 32.0 36.0 17 34.173287916799346 36.0 36.0 36.0 32.0 36.0 18 34.16512664769753 36.0 36.0 36.0 32.0 36.0 19 34.18244504255935 36.0 36.0 36.0 32.0 36.0 20 34.14711357754511 36.0 36.0 36.0 32.0 36.0 21 34.125761869972635 36.0 36.0 36.0 32.0 36.0 22 34.12285355825272 36.0 36.0 36.0 32.0 36.0 23 34.07768101536352 36.0 36.0 36.0 32.0 36.0 24 34.07078787833578 36.0 36.0 36.0 32.0 36.0 25 33.67374271931342 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 6.0 4 18.0 5 13.0 6 91.0 7 35.0 8 123.0 9 133.0 10 191.0 11 62.0 12 121.0 13 110.0 14 263.0 15 395.0 16 650.0 17 854.0 18 1090.0 19 1472.0 20 2160.0 21 3278.0 22 4973.0 23 7631.0 24 11100.0 25 16331.0 26 23415.0 27 31059.0 28 41944.0 29 56903.0 30 74647.0 31 101493.0 32 142805.0 33 201843.0 34 436133.0 35 983545.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.61630246041522 17.27859504521543 11.436525596890771 25.66857689747858 2 16.457279696076892 20.113085283013945 37.78691532311646 25.642719697792703 3 18.58906815015675 24.744551139192822 28.56882432913786 28.09755638151257 4 12.422516627308184 15.5400815454946 36.138548079904325 35.89885374729289 5 14.29037692292987 36.98893416309625 33.5207247230277 15.199964190946183 6 33.35200021635555 35.814863066522804 17.36509718747115 13.468039529650502 7 29.75865325203726 30.802196392972476 21.1924408641011 18.246709490889167 8 28.14112537637538 32.39085580392288 19.76479103937437 19.703227780327367 9 27.7629368832069 13.994769226032966 18.778450554632762 39.46384333612737 10 15.731756980859576 26.785816746226004 31.732397000862534 25.750029272051883 11 36.5580357809258 21.43021077458166 22.924767879267364 19.086985565225177 12 24.862586994025765 23.983293041690885 29.031862276292745 22.1222576879906 13 29.3066673135831 19.855311541580086 25.587193293964738 25.250827850872078 14 23.71882797089522 19.564081462031847 25.96308343457303 30.7540071324999 15 24.76688834898918 27.07458639825938 23.086450507742086 25.07207474500935 16 25.193752157726294 25.94184169520308 24.086057122596177 24.778349024474448 17 23.559271507885747 25.880419920029894 25.59934426566011 24.960964306424245 18 24.210767464223775 25.26962519123967 26.622848539113207 23.896758805423346 19 25.23201360891447 25.03311480748621 26.163847261770513 23.571024321828805 20 25.589250253822264 24.241006106665075 25.50503165312948 24.664711986383182 21 26.6020463866299 24.151701356326022 25.21464664137844 24.031605615665637 22 25.767711869626158 24.16267429121727 25.524669987476972 24.544943851679594 23 24.161948155873 24.337203795339114 26.11845620125469 25.382391847533192 24 24.365145204983467 25.143637267957107 25.937526536851113 24.55369099020831 25 24.501208223666254 24.666892805201872 25.950143451773002 24.881755519358876 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 326.0 1 326.0 2 854.0 3 1382.0 4 1382.0 5 1382.0 6 3874.5 7 6367.0 8 6367.0 9 6367.0 10 6394.5 11 6422.0 12 6422.0 13 6422.0 14 6337.5 15 6253.0 16 6253.0 17 6253.0 18 10736.5 19 15220.0 20 15220.0 21 15220.0 22 24708.5 23 34197.0 24 34197.0 25 34197.0 26 49849.5 27 65502.0 28 65502.0 29 65502.0 30 81355.0 31 97208.0 32 97208.0 33 97208.0 34 117591.0 35 137974.0 36 137974.0 37 137974.0 38 157875.0 39 177776.0 40 177776.0 41 177776.0 42 203446.5 43 229117.0 44 229117.0 45 229117.0 46 255465.5 47 281814.0 48 281814.0 49 281814.0 50 287501.5 51 293189.0 52 293189.0 53 293189.0 54 268988.5 55 244788.0 56 244788.0 57 244788.0 58 222423.0 59 200058.0 60 200058.0 61 200058.0 62 175107.0 63 150156.0 64 150156.0 65 150156.0 66 123250.0 67 96344.0 68 96344.0 69 96344.0 70 72505.5 71 48667.0 72 48667.0 73 48667.0 74 37029.0 75 25391.0 76 25391.0 77 25391.0 78 20172.0 79 14953.0 80 14953.0 81 14953.0 82 10290.5 83 5628.0 84 5628.0 85 5628.0 86 4336.5 87 3045.0 88 3045.0 89 3045.0 90 2189.5 91 1334.0 92 1334.0 93 1334.0 94 932.5 95 531.0 96 531.0 97 531.0 98 888.0 99 1245.0 100 1245.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03813720722816633 2 0.006247415365005242 3 0.0016317875953371903 4 0.00335682019612222 5 0.00829880548485771 6 0.012541453232734406 7 0.02153959625845091 8 0.03501349954566371 9 0.04830091282198083 10 0.05613349327959935 11 0.05478144070060568 12 0.0628937561745677 13 0.06457216627262882 14 0.06802223147419888 15 0.059630180983893326 16 0.06653031138703344 17 0.06228766363915674 18 0.07618116945088482 19 0.07394328932013668 20 0.07716024200808713 21 0.0744561368500998 22 0.07622779195360875 23 0.08075017471782896 24 0.07650752696995226 25 0.0773001095162589 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2144887.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.142365708397634 #Duplication Level Percentage of deduplicated Percentage of total 1 71.67817329519983 33.07400485497012 2 15.142391794290107 13.974115597439472 3 5.593791582004634 7.743323306202419 4 2.554942868150193 4.715644327449943 5 1.4024383256761408 3.2355911053410673 6 0.8484269224299457 2.348905519896772 7 0.5394557237156471 1.7424234301022992 8 0.3599108542809243 1.3285710608521775 9 0.27301021696118993 1.133760354583699 >10 1.401280295560562 11.667473073795524 >50 0.1073050463570755 3.448751424936695 >100 0.0836333506843655 8.06571320960924 >500 0.01005821829496146 3.1726371188100613 >1k 0.004876711900587373 3.422881473384919 >5k 3.047944937867108E-4 0.9262041426256039 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 8440 0.3934939229898824 No Hit TATCAACGCAGAGTACTTTTTTTTT 6283 0.2929291846143876 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 5034 0.2346976787122119 No Hit GTACATGGGGTGGTATCAACGCAAA 3397 0.15837664175315527 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 3393 0.15819015174225962 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 3084 0.14378379840056843 No Hit GGTATCAACGCAGAGTACTTTTTTT 2858 0.13324711278496257 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.3311251361959862E-4 2 0.0 0.0 0.0 0.0 2.3311251361959862E-4 3 0.0 0.0 0.0 0.0 2.3311251361959862E-4 4 0.0 0.0 0.0 0.0 2.3311251361959862E-4 5 0.0 0.0 0.0 0.0 2.3311251361959862E-4 6 0.0 0.0 0.0 0.0 3.2635751906743806E-4 7 0.0 0.0 0.0 4.662250272391972E-5 3.2635751906743806E-4 8 0.0 0.0 0.0 4.662250272391972E-5 3.2635751906743806E-4 9 0.0 0.0 0.0 4.662250272391972E-5 3.2635751906743806E-4 10 0.0 0.0 0.0 9.324500544783944E-5 3.2635751906743806E-4 11 0.0 0.0 0.0 1.3986750817175916E-4 3.2635751906743806E-4 12 0.0 0.0 0.0 1.3986750817175916E-4 5.12847529963117E-4 13 0.0 0.0 0.0 1.3986750817175916E-4 5.594700326870366E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTCCA 370 0.0 12.581977 10 CGTCGTA 330 0.0 12.091771 10 CCGTCGT 330 0.0 11.804421 9 CGCGCTA 65 8.0176676E-4 11.693686 16 GTCTTAA 130 2.6284397E-9 11.689321 1 CAACGGA 90 7.4504787E-6 11.613022 14 TGTACCG 90 7.4698564E-6 11.610312 5 TAAACCT 150 1.7644197E-10 11.398153 4 GTATTAG 350 0.0 11.397089 1 CGCCGGT 385 0.0 11.350663 7 ACCGTCG 360 0.0 11.34856 8 CGAGCCG 370 0.0 11.29863 15 ACCGAGT 85 5.318418E-5 11.177789 8 GGACCGT 85 5.3247426E-5 11.176484 6 ATACCGT 385 0.0 11.1039095 6 GTTTACG 60 0.005871733 11.0846405 9 CGTTATT 155 3.1650416E-10 11.02584 2 AACGGAC 95 1.3589732E-5 11.001297 15 TTAGTCT 130 3.275636E-8 10.959762 4 GTCCTAT 480 0.0 10.684771 1 >>END_MODULE