##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064075_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2144887 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.271067893087142 32.0 32.0 32.0 32.0 32.0 2 31.397371982766458 32.0 32.0 32.0 32.0 32.0 3 31.482396974759045 32.0 32.0 32.0 32.0 32.0 4 31.567364621073278 32.0 32.0 32.0 32.0 32.0 5 31.508093899585386 32.0 32.0 32.0 32.0 32.0 6 35.09491688839552 36.0 36.0 36.0 36.0 36.0 7 35.1136516748901 36.0 36.0 36.0 36.0 36.0 8 35.065681781837455 36.0 36.0 36.0 36.0 36.0 9 35.17654822841483 36.0 36.0 36.0 36.0 36.0 10 35.02692496154809 36.0 36.0 36.0 36.0 36.0 11 35.17983324995676 36.0 36.0 36.0 36.0 36.0 12 35.08470656029898 36.0 36.0 36.0 36.0 36.0 13 35.12553994685967 36.0 36.0 36.0 36.0 36.0 14 35.07639283561325 36.0 36.0 36.0 36.0 36.0 15 35.04147397974812 36.0 36.0 36.0 36.0 36.0 16 35.05673352488966 36.0 36.0 36.0 36.0 36.0 17 35.01469214928339 36.0 36.0 36.0 36.0 36.0 18 35.015084244531295 36.0 36.0 36.0 36.0 36.0 19 35.01293867695594 36.0 36.0 36.0 36.0 36.0 20 35.00225606290681 36.0 36.0 36.0 36.0 36.0 21 35.00398016305754 36.0 36.0 36.0 36.0 36.0 22 34.99407521235384 36.0 36.0 36.0 36.0 36.0 23 34.945411110235646 36.0 36.0 36.0 36.0 36.0 24 34.91845491161073 36.0 36.0 36.0 32.0 36.0 25 34.89542432771517 36.0 36.0 36.0 32.0 36.0 26 34.82810469735702 36.0 36.0 36.0 32.0 36.0 27 34.826488761412605 36.0 36.0 36.0 32.0 36.0 28 34.810390477447065 36.0 36.0 36.0 32.0 36.0 29 34.77572291687161 36.0 36.0 36.0 32.0 36.0 30 34.7554505202372 36.0 36.0 36.0 32.0 36.0 31 34.740194238670846 36.0 36.0 36.0 32.0 36.0 32 34.70135163297647 36.0 36.0 36.0 32.0 36.0 33 34.66227311741831 36.0 36.0 36.0 32.0 36.0 34 34.64841178113346 36.0 36.0 36.0 32.0 36.0 35 34.60368961162057 36.0 36.0 36.0 32.0 36.0 36 34.57088881605418 36.0 36.0 36.0 32.0 36.0 37 34.56494444695688 36.0 36.0 36.0 32.0 36.0 38 34.51788649005752 36.0 36.0 36.0 32.0 36.0 39 34.51213840169669 36.0 36.0 36.0 32.0 36.0 40 34.48123467576614 36.0 36.0 36.0 32.0 36.0 41 34.461486782287366 36.0 36.0 36.0 32.0 36.0 42 34.38727821092673 36.0 36.0 36.0 32.0 36.0 43 34.36981155650624 36.0 36.0 36.0 32.0 36.0 44 34.29535168985592 36.0 36.0 36.0 32.0 36.0 45 34.257194434951586 36.0 36.0 36.0 32.0 36.0 46 34.213295618836796 36.0 36.0 36.0 32.0 36.0 47 34.15761016780837 36.0 36.0 36.0 32.0 36.0 48 34.10330101306036 36.0 36.0 36.0 32.0 36.0 49 34.069527672087155 36.0 36.0 36.0 32.0 36.0 50 33.47622462162342 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 1.0 19 6.0 20 18.0 21 67.0 22 217.0 23 716.0 24 1791.0 25 4084.0 26 8290.0 27 15315.0 28 25361.0 29 38185.0 30 54945.0 31 78248.0 32 112217.0 33 178858.0 34 369305.0 35 1257261.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.75863171921932 18.225901358974145 12.007986176193846 26.00748074561269 2 15.756933494585706 20.85978782942433 37.294149131092766 26.089129544897194 3 17.905294203762086 25.286473704282862 28.889109570072648 27.919122521882407 4 12.104274024692211 16.190549898432877 36.20325919267542 35.50191688419949 5 13.888377336428444 37.415211150983716 33.36763195450389 15.328779558083946 6 33.33100220384981 36.26887806933991 17.031744855080674 13.3683748717296 7 29.633164310983716 30.95873716247592 21.228840347543272 18.17925817899709 8 28.087074050987304 32.7363166451193 19.55408373494734 19.622525568946056 9 27.74554050147795 13.900487677517415 18.649702078457338 39.7042697425473 10 15.633244982784463 27.06114370834528 31.770997242250676 25.534614066619575 11 36.77718220120687 21.370030216044015 22.868384208585347 18.984403374163765 12 24.779382008537524 24.060695123838865 29.00096228980215 22.158960577821457 13 29.458505332238012 19.859451213542215 25.569193212854064 25.11285024136571 14 23.734825505552287 19.524663827660447 26.03411283231432 30.70639783447294 15 24.776271802833843 27.057147786030335 23.141239934912043 25.02534047622378 16 25.212962121159137 26.0251810720022 24.086364409881273 24.675492396957384 17 23.584645717932926 25.978524742795305 25.626757959743333 24.81007157952843 18 24.26825743165119 25.07221849240983 26.761870127932564 23.897653948006415 19 25.241294875345353 24.979043175255004 26.347274400597513 23.43238754880213 20 25.716231885274222 24.082893563295883 25.69030958038968 24.510564971040218 21 26.673852748419847 24.06280610586945 25.41411272481954 23.84922842089117 22 25.82868001904063 24.053947830351902 25.710445352132773 24.4069267984747 23 24.203985875160967 24.125426481928542 26.404021867951215 25.266565774959275 24 24.486358211181976 24.970814218044833 26.107241430756034 24.435586140017158 25 24.659965041893315 24.464753528563495 26.214057560121834 24.661223869421352 26 24.394027345525753 25.176440419158187 26.381974799221364 24.047557436094696 27 24.862536874806796 24.93806990722026 25.68943707841961 24.50995613955334 28 24.198467267531612 24.78462996731159 26.52824486419927 24.488657900957527 29 24.23515095566792 25.0310629955218 26.23008296675502 24.503703082055264 30 24.246108972093513 25.086324823783595 26.328301953649884 24.339264250473004 31 24.566000716182746 25.040471785383904 25.589824982841453 24.803702515591894 32 24.4681843062035 25.119986646910558 25.346858620435636 25.064970426450305 33 24.15480920671658 24.797671744727438 25.893587320296422 25.15393172825956 34 24.86815952988283 24.881540562478932 25.93244117124598 24.31785873639226 35 25.297914192693217 24.74159944685567 25.924584197621346 24.035902162829764 36 24.403804127619278 25.349800417116803 25.6228426701257 24.62355278513822 37 25.114462033106804 25.30715921552245 25.491883686059786 24.086495065310963 38 24.357933039090526 25.12479519413777 25.919120218360113 24.598151548411586 39 24.82662702967832 25.155888806311832 25.302615910682498 24.714868253327353 40 24.987761290617364 25.353850228036297 25.654293059509502 24.00409542183684 41 24.102664045158082 25.738837879711173 25.907896276658988 24.25060179847176 42 25.273668304550313 25.696963084909324 25.4864579705442 23.54291063999616 43 24.60125491059065 24.931254062048048 25.606451534696532 24.86103949266477 44 24.291406994152037 25.50813600397977 25.270869884080415 24.92958711778778 45 24.450661909854936 25.56430414377855 25.335337510152208 24.649696436214306 46 24.31484974762898 25.448071620592135 25.245167745370555 24.99191088640833 47 24.53209687458476 25.310198686612257 25.55604510370262 24.601659335100372 48 25.186050653520116 25.83775245402234 24.767046212175607 24.20915068028194 49 24.50492452940148 25.864957165335976 24.825689142723935 24.80442916253861 50 24.51083054371847 25.95330231343771 24.92447059481738 24.611396548026445 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 72.0 1 73.5 2 75.0 3 185.0 4 295.0 5 380.5 6 466.0 7 492.0 8 518.0 9 735.5 10 953.0 11 1439.5 12 1926.0 13 3416.5 14 4907.0 15 7057.0 16 9207.0 17 10054.0 18 10901.0 19 10867.5 20 10834.0 21 11388.5 22 11943.0 23 13008.5 24 14074.0 25 14572.5 26 15071.0 27 17817.5 28 20564.0 29 23832.0 30 27100.0 31 31815.0 32 36530.0 33 41973.5 34 47417.0 35 53784.0 36 60151.0 37 69880.0 38 79609.0 39 87181.5 40 94754.0 41 103472.0 42 112190.0 43 116502.5 44 120815.0 45 131617.5 46 142420.0 47 150237.5 48 158055.0 49 162393.0 50 166731.0 51 162247.0 52 157763.0 53 154355.5 54 150948.0 55 150189.0 56 149430.0 57 145440.5 58 141451.0 59 127710.5 60 113970.0 61 99716.0 62 85462.0 63 73752.5 64 62043.0 65 52323.0 66 42603.0 67 36584.5 68 30566.0 69 27465.5 70 24365.0 71 18866.5 72 13368.0 73 11424.5 74 9481.0 75 7519.0 76 5557.0 77 4717.5 78 3878.0 79 3199.5 80 2521.0 81 2070.5 82 1620.0 83 1375.5 84 1131.0 85 852.0 86 573.0 87 401.5 88 230.0 89 171.5 90 113.0 91 98.0 92 83.0 93 64.0 94 45.0 95 47.5 96 50.0 97 41.0 98 32.0 99 29.0 100 26.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00843867299302947 2 4.196025245152775E-4 3 6.060925354109564E-4 4 0.0 5 0.0 6 1.8649001089567888E-4 7 1.3986750817175916E-4 8 0.0 9 0.0012588075735458324 10 0.001025695059926234 11 0.0 12 1.3986750817175916E-4 13 4.196025245152775E-4 14 2.3311251361959862E-4 15 0.004522382764220213 16 0.001025695059926234 17 0.0 18 3.2635751906743806E-4 19 4.662250272391972E-5 20 7.459600435827155E-4 21 0.0 22 0.0 23 6.060925354109564E-4 24 3.2635751906743806E-4 25 0.0015851650926132705 26 0.005221720305079009 27 0.006060925354109564 28 0.004196025245152776 29 0.0024243701416438255 30 0.003776422720637498 31 0.008531917998477308 32 0.003030462677054782 33 0.004895362786011571 34 0.0027973501634351835 35 0.002704105157987344 36 0.007646090446722835 37 0.0033101976933983005 38 0.008065692971238112 39 0.004149402742428855 40 0.0024709926443677453 41 0.0030770851797787013 42 0.0021446351253003072 43 0.0015385425898893506 44 0.0017716551035089493 45 0.0015385425898893506 46 0.001352052578993672 47 0.0024243701416438255 48 0.0019115226116807088 49 5.594700326870366E-4 50 0.0012588075735458324 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2144887.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.48455750652622 #Duplication Level Percentage of deduplicated Percentage of total 1 72.79525438749734 36.02240951940317 2 14.971505222128206 14.817166222473215 3 5.282762251483809 7.842454572805696 4 2.407364984529429 4.765095640645765 5 1.2875746397901815 3.1857530653321016 6 0.7443715405216731 2.210093778189975 7 0.4858693919396208 1.683012230626797 8 0.3412171991506425 1.3507985690868622 9 0.22999759020820484 1.0243196081118329 >10 1.2789354553924506 11.376343985623324 >50 0.09309725333142636 3.218594036909224 >100 0.07037243858126167 7.258512027448391 >500 0.008164857791318949 2.7843136312640837 >1k 0.003512787654404658 2.461133112079644 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2459 0.11464473419811859 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.8649001089567888E-4 2 0.0 0.0 0.0 0.0 1.8649001089567888E-4 3 0.0 0.0 0.0 0.0 1.8649001089567888E-4 4 0.0 0.0 0.0 0.0 1.8649001089567888E-4 5 0.0 0.0 0.0 0.0 2.3311251361959862E-4 6 0.0 0.0 0.0 0.0 2.797350163435183E-4 7 0.0 0.0 0.0 0.0 2.797350163435183E-4 8 0.0 0.0 0.0 0.0 3.2635751906743806E-4 9 0.0 0.0 0.0 0.0 3.2635751906743806E-4 10 0.0 0.0 0.0 0.0 3.2635751906743806E-4 11 0.0 0.0 0.0 4.662250272391972E-5 3.2635751906743806E-4 12 0.0 0.0 0.0 4.662250272391972E-5 5.12847529963117E-4 13 0.0 0.0 0.0 4.662250272391972E-5 6.993375408587959E-4 14 0.0 0.0 0.0 4.662250272391972E-5 6.993375408587959E-4 15 0.0 0.0 0.0 9.324500544783944E-5 9.324500544783945E-4 16 0.0 0.0 0.0 9.324500544783944E-5 0.001025695059926234 17 0.0 0.0 0.0 9.324500544783944E-5 0.001025695059926234 18 0.0 0.0 0.0 1.3986750817175916E-4 0.001165562568097993 19 0.0 0.0 0.0 1.3986750817175916E-4 0.001165562568097993 20 0.0 0.0 0.0 1.8649001089567888E-4 0.0012588075735458324 21 0.0 0.0 0.0 3.2635751906743806E-4 0.0012588075735458324 22 0.0 0.0 0.0 6.060925354109564E-4 0.0013054300762697522 23 0.0 0.0 0.0 0.0011189400653740733 0.0013520525789936719 24 0.0 0.0 0.0 0.0018182776062328691 0.0013986750817175917 25 0.0 0.0 0.0 0.002331125136195986 0.0013986750817175917 26 0.0 0.0 0.0 0.002983840174330862 0.001491920087165431 27 0.0 0.0 0.0 0.0033101976933983 0.0016317875953371903 28 0.0 0.0 0.0 0.005641322829594286 0.00167841009806111 29 0.0 0.0 0.0 0.010769798129225456 0.00167841009806111 30 0.0 0.0 0.0 0.019394961133150604 0.00167841009806111 31 0.0 0.0 0.0 0.04270621249511047 0.00167841009806111 32 0.0 0.0 0.0 0.06890805902595334 0.00167841009806111 33 0.0 0.0 0.0 0.09091388031164346 0.00167841009806111 34 0.0 0.0 0.0 0.11520420423080563 0.0018182776062328691 35 0.0 0.0 0.0 0.14504260597411425 0.001864900108956789 36 0.0 0.0 0.0 0.18751570595560513 0.001864900108956789 37 0.0 0.0 0.0 0.24779860197763331 0.001864900108956789 38 0.0 0.0 0.0 0.32640414157016195 0.0019115226116807086 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGATCG 125 9.968062E-10 21.120884 26 GTATCAA 6150 0.0 18.171 1 GTATAAT 290 0.0 17.446972 1 AACGCAG 6505 0.0 17.145529 6 TTAACGG 185 4.2200554E-10 16.650898 35 CGCGGTT 750 0.0 16.133633 10 CGCAATA 550 0.0 16.002163 36 ATCGATT 180 5.2641553E-9 15.890665 29 CGTTTAT 445 0.0 15.823101 31 GTATTAC 240 3.6379788E-12 15.582169 1 TAGTACA 240 3.6379788E-12 15.582169 4 ATACGAA 605 0.0 14.908672 40 GTATTAG 520 0.0 14.806586 1 CTAGCGG 610 0.0 14.788539 29 CAATACG 625 0.0 14.785308 38 GTACATG 8245 0.0 14.674465 1 TAGCGGC 645 0.0 14.6693325 30 CGTGCAA 165 5.422844E-7 14.666596 9 CCGTCGT 480 0.0 14.666595 9 ACCGTCG 510 0.0 14.66557 8 >>END_MODULE