##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064074_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 550436 Sequences flagged as poor quality 0 Sequence length 50 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.244640612169263 32.0 32.0 32.0 32.0 32.0 2 31.48256836398782 32.0 32.0 32.0 32.0 32.0 3 31.53764470347143 32.0 32.0 32.0 32.0 32.0 4 31.617904715534593 32.0 32.0 32.0 32.0 32.0 5 31.580407168135807 32.0 32.0 32.0 32.0 32.0 6 35.1633595913058 36.0 36.0 36.0 36.0 36.0 7 35.187349664629494 36.0 36.0 36.0 36.0 36.0 8 35.151403614589164 36.0 36.0 36.0 36.0 36.0 9 35.237996788000785 36.0 36.0 36.0 36.0 36.0 10 35.13264030695667 36.0 36.0 36.0 36.0 36.0 11 35.22648954646862 36.0 36.0 36.0 36.0 36.0 12 35.1823554418679 36.0 36.0 36.0 36.0 36.0 13 35.19815019366466 36.0 36.0 36.0 36.0 36.0 14 35.151367279756414 36.0 36.0 36.0 36.0 36.0 15 35.128670726478646 36.0 36.0 36.0 36.0 36.0 16 35.15119650604248 36.0 36.0 36.0 36.0 36.0 17 35.160819786496525 36.0 36.0 36.0 36.0 36.0 18 35.141896605599925 36.0 36.0 36.0 36.0 36.0 19 35.09816945112602 36.0 36.0 36.0 36.0 36.0 20 35.08862610730403 36.0 36.0 36.0 36.0 36.0 21 35.06559527356496 36.0 36.0 36.0 36.0 36.0 22 35.02725112456307 36.0 36.0 36.0 36.0 36.0 23 35.030107042417285 36.0 36.0 36.0 36.0 36.0 24 34.99984921044408 36.0 36.0 36.0 36.0 36.0 25 34.94989426563669 36.0 36.0 36.0 36.0 36.0 26 34.919645517371684 36.0 36.0 36.0 36.0 36.0 27 34.84856913428627 36.0 36.0 36.0 36.0 36.0 28 34.78868024620483 36.0 36.0 36.0 32.0 36.0 29 34.76608361371713 36.0 36.0 36.0 32.0 36.0 30 34.69472926916117 36.0 36.0 36.0 32.0 36.0 31 34.67003066659884 36.0 36.0 36.0 32.0 36.0 32 34.63661352091796 36.0 36.0 36.0 32.0 36.0 33 34.65875960147955 36.0 36.0 36.0 32.0 36.0 34 34.60534376385265 36.0 36.0 36.0 32.0 36.0 35 34.567175838789616 36.0 36.0 36.0 32.0 36.0 36 34.48478297204398 36.0 36.0 36.0 32.0 36.0 37 34.37511717983562 36.0 36.0 36.0 32.0 36.0 38 34.3085408657864 36.0 36.0 36.0 32.0 36.0 39 34.12809481937955 36.0 36.0 36.0 32.0 36.0 40 34.20244315415416 36.0 36.0 36.0 32.0 36.0 41 34.181423453407845 36.0 36.0 36.0 32.0 36.0 42 34.139200561009815 36.0 36.0 36.0 32.0 36.0 43 34.13462782230813 36.0 36.0 36.0 32.0 36.0 44 33.99778175846057 36.0 36.0 36.0 32.0 36.0 45 33.938884811313216 36.0 36.0 36.0 32.0 36.0 46 33.72503070293367 36.0 36.0 36.0 27.0 36.0 47 33.7414867486865 36.0 36.0 36.0 27.0 36.0 48 33.632929168877034 36.0 36.0 36.0 27.0 36.0 49 33.57147243276239 36.0 36.0 36.0 21.0 36.0 50 33.12136924183738 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 0.0 20 5.0 21 10.0 22 67.0 23 159.0 24 456.0 25 1099.0 26 2189.0 27 4308.0 28 7570.0 29 11010.0 30 15402.0 31 21199.0 32 30489.0 33 47265.0 34 92290.0 35 316916.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.56742098712719 20.763828956094372 12.785777228667206 25.882972828111235 2 11.038925647761584 21.739754448308062 47.74923060712092 19.47208929680943 3 18.634057187704954 27.615350097105367 30.866790326888104 22.883802388301575 4 10.108168797099026 18.571459715570928 40.6365136001279 30.683857887202144 5 9.671242433271079 42.12333495628919 36.61224919881694 11.593173411622788 6 28.71583384050796 40.15642173916993 19.392480492701228 11.735263927620881 7 25.708394269986467 32.731748526165674 23.164224658679046 18.395632545168823 8 22.055425153878016 43.92808609901969 20.169829008277073 13.846659738825224 9 26.853333866252925 14.22404787555843 21.022042886704323 37.900575371484315 10 15.216984508503337 30.028650275874725 35.79649402014058 18.95787119548136 11 33.24946042773365 20.01994782318017 30.051631797338835 16.67895995174734 12 26.2114033239105 23.813122688196266 34.95901430865714 15.016459679236096 13 31.17970332555161 23.367336742758 26.769373313833604 18.683586617856786 14 18.384005377565018 26.18910498060625 28.411529063377145 27.015360578451585 15 19.375480326376664 40.023836906144 23.10054196258405 17.50014080489529 16 17.156254485137957 27.91640702070567 35.73103888058224 19.196299613574137 17 17.6080416251844 31.969565944087957 31.491944567579154 18.930447863148487 18 17.704724445211514 27.05351222215157 39.01913940792283 16.22262392471409 19 24.289472345558792 24.615395795333153 29.016270738105792 22.078861121002262 20 23.922984268748422 29.266595571123098 30.757421884225693 16.052998275902787 21 21.189566089427288 25.964871483696562 28.03650197298142 24.80906045389473 22 22.9096570718485 32.56709226867429 28.169305786685463 16.35394487279175 23 18.405227855736182 32.410852487846 31.35187378732496 17.832045869092862 24 23.604999727485783 27.464164380575184 32.08963900950167 16.841196882437366 25 20.568106463187537 30.26806558568379 32.095925875459876 17.0679020756688 26 15.864366993279397 32.37154272279827 33.90207432089928 17.862015963023055 27 18.026689922691887 31.51645636315737 31.738842104306908 18.718011609843842 28 16.879266145720727 32.398634470003216 29.476080514671814 21.24601886960424 29 20.160749680698956 28.332312902305688 28.470389029488334 23.03654838750702 30 17.349035538897297 29.6387608532533 31.197777660693554 21.81442594715585 31 22.243358788057176 26.984732616385866 30.667945761997423 20.10396283355954 32 18.68251658300222 31.99833579512112 30.680234660155193 18.63891296172147 33 17.068402606817187 32.328312163996195 33.664424067456025 16.938861161730586 34 19.16420491913477 31.36793224108048 32.821544196997934 16.646318642786806 35 17.628730373864038 32.80712336532138 32.005363235673514 17.558783025141075 36 16.41951038710451 31.251249105186467 33.46838810016097 18.860852407548048 37 17.575411828615344 31.349845842470447 28.60153594314067 22.47320638577354 38 19.384395678669154 34.06354812804105 28.401158459699193 18.150897733590607 39 22.2925133855006 28.547498314889474 29.59998837228316 19.55999992732677 40 23.42234972012434 29.00169505998114 30.987803925344686 16.588151294549828 41 22.534333559225956 26.79607346536848 33.07485887767097 17.594734097734595 42 19.816867119654084 32.98281312452309 31.152211038843063 16.048108716979762 43 16.56519961847663 33.729935958577464 32.1720488713267 17.532815551619205 44 16.245299129771272 33.04362044219973 30.481260105735515 20.229820322293477 45 16.771978271533165 33.188961357484146 30.42712061479207 19.611939756190612 46 18.862889014043567 28.612902639754374 30.35099831041186 22.1732100357902 47 22.65730174792841 29.234061803376676 29.196272684826035 18.91236376386888 48 17.547636696607658 30.81487456759978 28.920125868434056 22.717362867358506 49 21.071487616068136 29.287412954575597 29.081755933077897 20.55934349627837 50 18.060226188854067 34.48825907253486 27.506018076940546 19.94549666167053 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 152.0 1 101.0 2 50.0 3 136.0 4 222.0 5 231.0 6 240.0 7 221.0 8 202.0 9 290.0 10 378.0 11 566.0 12 754.0 13 1350.0 14 1946.0 15 2523.0 16 3100.0 17 3449.0 18 3798.0 19 3779.5 20 3761.0 21 3972.5 22 4184.0 23 4635.0 24 5086.0 25 5810.0 26 6534.0 27 9918.0 28 13302.0 29 18089.0 30 22876.0 31 29192.5 32 35509.0 33 45093.5 34 54678.0 35 64075.0 36 73472.0 37 70957.0 38 68442.0 39 59420.0 40 50398.0 41 43311.0 42 36224.0 43 31434.0 44 26644.0 45 25023.5 46 23403.0 47 22724.5 48 22046.0 49 21131.0 50 20216.0 51 18940.5 52 17665.0 53 16199.5 54 14734.0 55 13147.5 56 11561.0 57 10370.5 58 9180.0 59 7869.0 60 6558.0 61 5454.0 62 4350.0 63 3690.0 64 3030.0 65 2543.5 66 2057.0 67 1715.0 68 1373.0 69 1121.0 70 869.0 71 670.0 72 471.0 73 430.5 74 390.0 75 296.5 76 203.0 77 185.0 78 167.0 79 120.5 80 74.0 81 63.5 82 53.0 83 41.5 84 30.0 85 28.0 86 26.0 87 17.5 88 9.0 89 6.0 90 3.0 91 2.0 92 1.0 93 2.0 94 3.0 95 2.0 96 1.0 97 5.0 98 9.0 99 5.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009265382351445037 2 3.633483275076485E-4 3 5.450224912614727E-4 4 0.0 5 0.0 6 1.8167416375382424E-4 7 1.8167416375382424E-4 8 0.0 9 0.0016350674737844182 10 9.083708187691213E-4 11 0.0 12 0.0 13 1.8167416375382424E-4 14 1.8167416375382424E-4 15 0.005268550748860903 16 0.0012717191462767697 17 0.0 18 1.8167416375382424E-4 19 0.0 20 5.450224912614727E-4 21 0.0 22 0.0 23 0.0 24 0.0010900449825229455 25 0.001998415801292067 26 0.007085292386399146 27 0.007448640713906793 28 0.004905202421353254 29 0.0027251124563073634 30 0.004541854093845606 31 0.00853868569642974 32 0.004178505766337958 33 0.005995247403876199 34 0.0025434382925535394 35 0.003996831602584134 36 0.007630314877660618 37 0.004541854093845606 38 0.009083708187691213 39 0.004905202421353254 40 0.0023617641287997154 41 0.004905202421353254 42 0.002906786620061188 43 0.001998415801292067 44 0.0010900449825229455 45 0.0010900449825229455 46 0.0010900449825229455 47 0.0023617641287997154 48 0.0036334832750764853 49 9.083708187691213E-4 50 0.001998415801292067 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 550436.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.13003938402738 #Duplication Level Percentage of deduplicated Percentage of total 1 80.38929934314089 49.14201034900569 2 12.272619645981727 15.004514446081021 3 3.46053791326079 6.34628456782656 4 1.3742032115275684 3.3602038576934863 5 0.6815782624591307 2.0832453013711802 6 0.38283229867271834 1.4041532097204603 7 0.25910632432120445 1.108742586728406 8 0.17182289867734732 0.840283245057919 9 0.14028606387909168 0.7718123348963148 >10 0.7547043633069984 8.646893039290903 >50 0.06112660845107256 2.6009059036867557 >100 0.047112209648171095 5.689036841702101 >500 0.002981785420770198 1.224534603266601 >1k 0.001789071252462119 1.7773797136726148 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 2215 0.4024082727147207 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 1811 0.3290119105581757 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 1790 0.32519675311934537 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 1625 0.2952205160999644 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 1184 0.2151022098845279 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 1126 0.20456510838680608 No Hit GATATACACTGTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTG 908 0.16496014068847242 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 832 0.15115290424318178 No Hit GTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGATTTCGTCA 769 0.13970743192669083 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 758 0.13770901612539876 No Hit TTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCCATATTTCACGTCCT 729 0.1324404653765379 No Hit GTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGATAAAAACCAC 610 0.11082123988983279 No Hit GGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGAAATACACACTT 564 0.10246422835715686 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 1.8167416375382424E-4 0.0 18 0.0 0.0 0.0 1.8167416375382424E-4 0.0 19 0.0 0.0 0.0 1.8167416375382424E-4 0.0 20 0.0 0.0 0.0 1.8167416375382424E-4 0.0 21 0.0 0.0 0.0 7.26696655015297E-4 0.0 22 0.0 0.0 0.0 0.0016350674737844182 0.0 23 0.0 0.0 0.0 0.004905202421353254 0.0 24 0.0 0.0 0.0 0.00817533736892209 0.0 25 0.0 0.0 0.0 0.009810404842706509 0.0 26 0.0 0.0 0.0 0.011082123988983278 0.0 27 1.8167416375382424E-4 0.0 0.0 0.01417058477279829 0.0 28 1.8167416375382424E-4 0.0 0.0 0.018167416375382425 0.0 29 1.8167416375382424E-4 0.0 0.0 0.025071034598027744 0.0 30 1.8167416375382424E-4 0.0 0.0 0.04233008015464105 0.0 31 1.8167416375382424E-4 0.0 0.0 0.07521310379408323 0.0 32 1.8167416375382424E-4 0.0 0.0 0.12117666722380077 0.0 33 1.8167416375382424E-4 0.0 0.0 0.16023661243087298 0.0 34 1.8167416375382424E-4 0.0 0.0 0.20438343422305227 0.0 35 1.8167416375382424E-4 0.0 0.0 0.2557972225653845 0.0 36 1.8167416375382424E-4 0.0 0.0 0.31502299994913124 0.0 37 1.8167416375382424E-4 0.0 0.0 0.4074951492998278 0.0 38 1.8167416375382424E-4 0.0 0.0 0.531215254816182 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGTAC 35 3.215369E-4 31.42896 3 AGGCGGA 30 0.005739432 29.33636 32 GGCGGAT 30 0.005739432 29.33636 33 AATCGTG 30 0.0057419813 29.333698 34 GGCGATA 40 7.0304587E-4 27.49784 19 TAGGACC 895 0.0 25.810375 4 GCGATAA 45 0.0013971463 24.444748 20 GTATAGG 65 1.809617E-5 23.694754 1 ATAGGAC 150 0.0 23.466957 3 CCTACCG 75 2.0606458E-6 23.466957 3 CTACCGT 75 2.0606458E-6 23.466957 4 GTGGCAC 50 0.0025784832 22.000273 3 CGAATTT 50 0.0025784832 22.000273 25 AGATTAT 50 0.0025784832 22.000273 6 GGACCTA 100 4.6118657E-8 22.000273 6 ACTGTGC 130 6.730261E-11 22.00027 8 TCCTATA 150 0.0 21.998276 2 TGTAGGA 2865 0.0 21.8831 2 CTACACT 185 0.0 21.40567 4 CTGTAGG 2850 0.0 21.23026 1 >>END_MODULE