##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064073_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1275133 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.308523895154465 32.0 32.0 32.0 32.0 32.0 2 31.427065255153774 32.0 32.0 32.0 32.0 32.0 3 31.495786714013363 32.0 32.0 32.0 32.0 32.0 4 31.574234217136567 32.0 32.0 32.0 32.0 32.0 5 31.53489479136686 32.0 32.0 32.0 32.0 32.0 6 35.122641324473605 36.0 36.0 36.0 36.0 36.0 7 35.13608227533912 36.0 36.0 36.0 36.0 36.0 8 35.088573505665686 36.0 36.0 36.0 36.0 36.0 9 35.18440743044059 36.0 36.0 36.0 36.0 36.0 10 35.05192007421971 36.0 36.0 36.0 36.0 36.0 11 35.19166079146254 36.0 36.0 36.0 36.0 36.0 12 35.09173788146021 36.0 36.0 36.0 36.0 36.0 13 35.139351738210834 36.0 36.0 36.0 36.0 36.0 14 35.08099155146953 36.0 36.0 36.0 36.0 36.0 15 35.06076777873367 36.0 36.0 36.0 36.0 36.0 16 35.073171190769905 36.0 36.0 36.0 36.0 36.0 17 35.0297435640047 36.0 36.0 36.0 36.0 36.0 18 35.03210567054574 36.0 36.0 36.0 36.0 36.0 19 35.03099362968412 36.0 36.0 36.0 36.0 36.0 20 35.01558425670107 36.0 36.0 36.0 36.0 36.0 21 35.0131076522998 36.0 36.0 36.0 36.0 36.0 22 35.00337376571699 36.0 36.0 36.0 36.0 36.0 23 34.947848577364084 36.0 36.0 36.0 36.0 36.0 24 34.91810579759131 36.0 36.0 36.0 36.0 36.0 25 34.88979894646284 36.0 36.0 36.0 32.0 36.0 26 34.837815349457664 36.0 36.0 36.0 32.0 36.0 27 34.83240650190999 36.0 36.0 36.0 32.0 36.0 28 34.805275998660534 36.0 36.0 36.0 32.0 36.0 29 34.76927034277993 36.0 36.0 36.0 32.0 36.0 30 34.75045269787544 36.0 36.0 36.0 32.0 36.0 31 34.74120425085069 36.0 36.0 36.0 32.0 36.0 32 34.70348191129867 36.0 36.0 36.0 32.0 36.0 33 34.67906328202627 36.0 36.0 36.0 32.0 36.0 34 34.664243651446554 36.0 36.0 36.0 32.0 36.0 35 34.619933763772096 36.0 36.0 36.0 32.0 36.0 36 34.59837914946912 36.0 36.0 36.0 32.0 36.0 37 34.57980069530002 36.0 36.0 36.0 32.0 36.0 38 34.52999883149444 36.0 36.0 36.0 32.0 36.0 39 34.51801576776697 36.0 36.0 36.0 32.0 36.0 40 34.50604760444597 36.0 36.0 36.0 32.0 36.0 41 34.483979318235825 36.0 36.0 36.0 32.0 36.0 42 34.41122220191933 36.0 36.0 36.0 32.0 36.0 43 34.40201924034591 36.0 36.0 36.0 32.0 36.0 44 34.33486546109308 36.0 36.0 36.0 32.0 36.0 45 34.304406677577944 36.0 36.0 36.0 32.0 36.0 46 34.25939411810376 36.0 36.0 36.0 32.0 36.0 47 34.232814929893586 36.0 36.0 36.0 32.0 36.0 48 34.18406393685992 36.0 36.0 36.0 32.0 36.0 49 34.155730421846194 36.0 36.0 36.0 32.0 36.0 50 33.56484617683018 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 0.0 17 1.0 18 1.0 19 5.0 20 6.0 21 30.0 22 168.0 23 418.0 24 1058.0 25 2343.0 26 4825.0 27 8734.0 28 14612.0 29 22614.0 30 32318.0 31 45238.0 32 65301.0 33 103975.0 34 217793.0 35 755692.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.30695748335333 17.94098962377356 11.629844003670502 26.122208889202607 2 15.837976668954024 20.60707773747672 37.31932163513381 26.23562395843545 3 18.216573996376837 24.62047006971838 28.79157419243528 28.3713817414695 4 12.108776104139725 15.855287252388575 36.11787946825939 35.91805717521231 5 14.030614845667081 37.25713317748031 33.491722039975436 15.220529936877172 6 34.155132539531294 35.86837096482003 16.71634791460315 13.260148581045526 7 29.99313012299903 30.631495405965815 21.01531449293093 18.36005997810423 8 28.035036345228303 33.3992610966856 19.335002701678963 19.230699856407135 9 27.58678020387133 13.767039599472364 18.38896478600412 40.257215410652194 10 15.667821849343161 26.995121254969128 31.69921646774468 25.637840427943033 11 37.39319741548528 20.900486459059564 22.64595144192802 19.06036468352713 12 24.802451824595416 23.65590385936515 29.154550274010848 22.38709404202859 13 29.74216726307691 19.463207251972154 25.347709917976925 25.44691556697401 14 23.396377935095195 19.836581240015715 25.383706275992466 31.38333454889662 15 25.006254484995118 27.78693185160205 22.27467188461946 24.932141778783375 16 25.385805010642088 25.84693591064726 24.334379504456816 24.43287957425384 17 23.82990637055115 26.06967273217774 25.48432202758457 24.616098869686535 18 24.583002974601 24.933477318765394 26.857047404615532 23.62647230201807 19 25.675851598109055 24.746222351882004 25.575234563951028 24.002691486057913 20 25.83552396308449 24.37676844991248 25.278560270027796 24.509147316975238 21 26.782069007703512 24.205004497570055 24.590689755500016 24.42223673922642 22 25.858754904398058 24.492307064921174 25.228153028982902 24.420785001697865 23 24.221722750101165 24.351435625084306 25.839055652626726 25.587785972187802 24 24.81960648687309 24.925007587467622 25.676068852641578 24.57931707301771 25 24.82450547442536 24.52876651522887 25.703879897514803 24.942848112830962 26 24.292054588675228 25.620224255585804 26.08686786456826 24.00085329117071 27 25.023704562334174 25.003470394981925 25.286513456897698 24.686311585786203 28 24.332041911095775 24.949336512218842 25.8624556890548 24.85616588763058 29 24.334528001505753 24.746649308687093 25.83855510504976 25.080267584757394 30 24.175624232404715 25.177517438039477 26.14827548886899 24.498582840686826 31 25.152995560128844 24.733792038976123 25.07339002711294 25.039822373782094 32 24.513250045094857 25.17359558933095 24.971805911739565 25.341348453834634 33 24.19278941548307 24.815265044272078 25.686746609990042 25.305198930254807 34 25.052427013911 24.86899128386189 25.754564718541044 24.32401698368606 35 25.447124950297667 24.810856636898855 25.7441233606072 23.997895052196274 36 24.270007301691624 25.466276929399466 25.381417312459853 24.882298456449057 37 25.28217748791452 25.202888594006357 25.072152109194374 24.442781808884746 38 24.575068155366 25.26140602402457 25.42814746029107 24.73537836031836 39 25.318841238943886 24.68241357837824 25.01948888153426 24.97925630114361 40 25.550344676145585 25.092423398765597 25.34416638564516 24.013065539443655 41 24.467571170888558 25.25041173241314 26.05152537055917 24.230491726139125 42 25.60137901719929 25.61949508709438 25.276387702717646 23.50273819298869 43 24.74186621745193 24.80468413020326 25.579281538748695 24.874168113596117 44 24.265637743898612 25.458466654118826 25.096226237530583 25.179669364451975 45 24.48843869891053 25.61006214336578 25.113323023160245 24.788176134563443 46 24.373943240029988 25.100539241673754 25.252681307857117 25.27283621043914 47 24.913085589029922 24.992530026938958 25.550601715152872 24.54378266887825 48 25.320521869520075 25.539326864861643 24.588505444244724 24.55164582137356 49 24.674287856365908 25.58274496149017 24.804470763350217 24.938496418793708 50 24.627545150617077 26.054782252037256 24.572099432132326 24.74557316521334 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 44.0 1 36.5 2 29.0 3 114.0 4 199.0 5 241.0 6 283.0 7 283.0 8 283.0 9 368.5 10 454.0 11 676.0 12 898.0 13 1606.0 14 2314.0 15 3079.5 16 3845.0 17 4113.0 18 4381.0 19 4421.0 20 4461.0 21 4825.0 22 5189.0 23 5781.5 24 6374.0 25 7162.5 26 7951.0 27 9975.5 28 12000.0 29 14300.5 30 16601.0 31 19156.5 32 21712.0 33 25969.0 34 30226.0 35 34860.5 36 39495.0 37 44956.0 38 50417.0 39 53689.0 40 56961.0 41 61190.5 42 65420.0 43 66962.0 44 68504.0 45 75608.5 46 82713.0 47 87992.0 48 93271.0 49 96231.0 50 99191.0 51 95178.0 52 91165.0 53 90451.0 54 89737.0 55 89897.5 56 90058.0 57 87466.5 58 84875.0 59 76758.5 60 68642.0 61 60254.0 62 51866.0 63 44954.5 64 38043.0 65 32557.0 66 27071.0 67 23218.0 68 19365.0 69 17582.0 70 15799.0 71 12260.0 72 8721.0 73 7518.5 74 6316.0 75 4934.5 76 3553.0 77 3106.0 78 2659.0 79 2184.0 80 1709.0 81 1390.0 82 1071.0 83 854.0 84 637.0 85 472.5 86 308.0 87 213.0 88 118.0 89 93.0 90 68.0 91 61.5 92 55.0 93 41.0 94 27.0 95 24.5 96 22.0 97 19.5 98 17.0 99 16.0 100 15.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00807758876917153 2 6.273855354696334E-4 3 2.352695758011125E-4 4 0.0 5 0.0 6 3.136927677348167E-4 7 7.842319193370418E-5 8 0.0 9 0.0011763478790055627 10 7.842319193370416E-4 11 0.0 12 7.842319193370418E-5 13 3.136927677348167E-4 14 3.136927677348167E-4 15 0.0037643132128178 16 5.489623435359293E-4 17 0.0 18 3.136927677348167E-4 19 7.842319193370418E-5 20 3.921159596685208E-4 21 0.0 22 1.5684638386740836E-4 23 7.058087274033375E-4 24 3.136927677348167E-4 25 0.0017253102225414916 26 0.005489623435359292 27 0.004862237899889659 28 0.004156429172486321 29 0.0018037334144751958 30 0.003685890020884096 31 0.0075286264256356 32 0.0033721972531492797 33 0.004940661091823362 34 0.0021174261822100126 35 0.003293774061215575 36 0.006744394506298559 37 0.0038427364047515043 38 0.008234435153038937 39 0.003685890020884096 40 0.0018037334144751958 41 0.0025879653338122376 42 0.0017253102225414916 43 0.0014900406467403791 44 0.0010195014951381543 45 0.001333194262872971 46 7.058087274033375E-4 47 0.002195849374143717 48 0.0019605797983426043 49 3.136927677348167E-4 50 9.4107830320445E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1275133.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.90797018245573 #Duplication Level Percentage of deduplicated Percentage of total 1 79.9804096830445 47.11483588789378 2 12.385005710799675 14.591510942426622 3 3.527603252871285 6.234118417070264 4 1.4307662233431295 3.3713413609104745 5 0.7222591476774721 2.1273410167695204 6 0.4544926892962829 1.606394507352573 7 0.2830261085888415 1.1670745495925565 8 0.19699300403221345 0.9283566406145608 9 0.14688626442735828 0.7787494516589215 >10 0.7372595577165553 7.720756211071285 >50 0.06246007814883765 2.562801075025038 >100 0.06438744444402729 7.900673493016559 >500 0.006707012388796465 2.6846806210965033 >1k 0.0017438232210870807 1.2113658255013804 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1425 0.11175304850552845 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1384 0.10853769763624659 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1370 0.10743977294917471 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1308 0.10257753504928505 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 7.842319193370416E-5 0.0 9 0.0 0.0 0.0 7.842319193370416E-5 0.0 10 0.0 0.0 0.0 7.842319193370416E-5 0.0 11 0.0 0.0 0.0 3.1369276773481666E-4 0.0 12 0.0 0.0 0.0 3.1369276773481666E-4 0.0 13 0.0 0.0 0.0 3.1369276773481666E-4 0.0 14 0.0 0.0 0.0 3.1369276773481666E-4 0.0 15 0.0 0.0 0.0 3.1369276773481666E-4 7.842319193370416E-5 16 0.0 0.0 0.0 3.1369276773481666E-4 7.842319193370416E-5 17 0.0 0.0 0.0 3.1369276773481666E-4 7.842319193370416E-5 18 0.0 0.0 0.0 3.1369276773481666E-4 7.842319193370416E-5 19 0.0 0.0 0.0 3.1369276773481666E-4 7.842319193370416E-5 20 0.0 0.0 0.0 5.489623435359291E-4 7.842319193370416E-5 21 0.0 0.0 0.0 5.489623435359291E-4 7.842319193370416E-5 22 0.0 0.0 0.0 7.842319193370417E-4 7.842319193370416E-5 23 0.0 0.0 0.0 9.410783032044501E-4 7.842319193370416E-5 24 0.0 0.0 0.0 0.0015684638386740835 7.842319193370416E-5 25 0.0 0.0 0.0 0.002274272566077421 7.842319193370416E-5 26 0.0 0.0 0.0 0.0030585044854144626 7.842319193370416E-5 27 0.0 0.0 0.0 0.0040780059805526165 7.842319193370416E-5 28 0.0 0.0 0.0 0.007214933657900784 7.842319193370416E-5 29 0.0 0.0 0.0 0.011449786022320808 7.842319193370416E-5 30 0.0 0.0 0.0 0.022350609701105688 7.842319193370416E-5 31 0.0 0.0 0.0 0.04227010045226655 7.842319193370416E-5 32 0.0 0.0 0.0 0.06493440292110705 7.842319193370416E-5 33 0.0 0.0 0.0 0.086422357510942 7.842319193370416E-5 34 0.0 0.0 0.0 0.11339993553613623 7.842319193370416E-5 35 0.0 0.0 0.0 0.14414182677414827 7.842319193370416E-5 36 0.0 0.0 0.0 0.18609823445867998 7.842319193370416E-5 37 0.0 0.0 0.0 0.24530774436862665 7.842319193370416E-5 38 0.0 0.0 0.0 0.3292205597376901 7.842319193370416E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTGTACG 60 2.8729838E-4 21.999903 1 GTAGGAC 755 0.0 20.396461 3 GTCCTAA 300 0.0 19.066582 1 TAGGACG 470 0.0 18.722586 4 AAGTCGA 60 0.0074125095 18.333252 40 GTATAGA 170 1.2732926E-10 18.117567 1 GTCCTAC 550 0.0 17.99992 1 ACCGTCG 345 0.0 17.853592 8 TCACGGA 360 0.0 17.723534 36 TGTAGGA 845 0.0 17.70337 2 CTGTAGG 900 0.0 17.599922 1 CGGAAAA 375 0.0 17.59992 39 ATACCGT 390 0.0 17.486416 6 AATCACG 355 0.0 17.352716 34 GTATCAA 2770 0.0 17.314001 1 ATTTCGT 280 0.0 17.284958 42 TCCTACA 650 0.0 17.260784 2 ACGTATG 115 4.2718384E-6 17.21799 32 TAGGACC 850 0.0 17.081608 4 CGAGCCG 440 0.0 16.998592 15 >>END_MODULE