##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064072_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2458804 Sequences flagged as poor quality 0 Sequence length 25 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.252779806767844 32.0 32.0 32.0 32.0 32.0 2 30.848550352122412 32.0 32.0 32.0 32.0 32.0 3 30.861750265576273 32.0 32.0 32.0 32.0 32.0 4 30.89094332041106 32.0 32.0 32.0 32.0 32.0 5 30.800731981890383 32.0 32.0 32.0 32.0 32.0 6 34.45479102848377 36.0 36.0 36.0 32.0 36.0 7 34.3883156201145 36.0 36.0 36.0 32.0 36.0 8 34.34180235594216 36.0 36.0 36.0 32.0 36.0 9 34.49127705990392 36.0 36.0 36.0 32.0 36.0 10 34.18042430384854 36.0 36.0 36.0 32.0 36.0 11 34.46496914760184 36.0 36.0 36.0 32.0 36.0 12 34.267778562260354 36.0 36.0 36.0 32.0 36.0 13 34.36135169781731 36.0 36.0 36.0 32.0 36.0 14 34.247872542911104 36.0 36.0 36.0 32.0 36.0 15 34.182973510698694 36.0 36.0 36.0 32.0 36.0 16 34.181165314518765 36.0 36.0 36.0 32.0 36.0 17 34.09898959006086 36.0 36.0 36.0 32.0 36.0 18 34.09501245320896 36.0 36.0 36.0 32.0 36.0 19 34.11283168564879 36.0 36.0 36.0 32.0 36.0 20 34.09165187627806 36.0 36.0 36.0 32.0 36.0 21 34.0781200941596 36.0 36.0 36.0 32.0 36.0 22 34.06130338164408 36.0 36.0 36.0 32.0 36.0 23 34.00407352517728 36.0 36.0 36.0 32.0 36.0 24 33.988552564580175 36.0 36.0 36.0 32.0 36.0 25 33.59346820649389 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 8.0 4 20.0 5 36.0 6 95.0 7 39.0 8 158.0 9 173.0 10 218.0 11 62.0 12 155.0 13 137.0 14 233.0 15 407.0 16 671.0 17 869.0 18 1178.0 19 1581.0 20 2499.0 21 3818.0 22 6001.0 23 9242.0 24 13664.0 25 20112.0 26 27968.0 27 36885.0 28 49495.0 29 66691.0 30 87896.0 31 118888.0 32 167640.0 33 237431.0 34 510010.0 35 1094523.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.13017342216346 16.642994456593602 11.110410415501196 26.11642170574175 2 17.425319015495443 19.300000244035566 36.35666286242332 26.918017878045664 3 19.30160703021321 22.977119758382177 27.85392956365386 29.867343647750754 4 12.994307542384325 14.91565433978717 34.59457304941001 37.49546506841849 5 15.309002817066395 35.828602294164206 32.765906907466324 16.096487981303074 6 35.39197326482499 34.45196307968651 16.34202215674375 13.814041498744755 7 31.35376550851074 29.84512947641144 19.96097218871822 18.840132826359596 8 29.019375380658307 31.81573147625648 18.758963396995746 20.405929746089466 9 27.58568633706168 14.089050638680192 18.072256800218753 40.25300622403938 10 16.394708806095633 25.94534147538462 30.508031770603157 27.151917947916594 11 37.81953045331024 20.875392787761545 21.8288263286013 19.476250430326917 12 25.544343721067463 23.146028548464223 27.75024672140321 23.559381009065103 13 29.64149059040996 19.007526532512554 25.010520215499593 26.340462661577895 14 24.258552997593526 19.124210814200847 24.41161831265127 32.20561787555436 15 25.58788100760998 26.566678875188217 21.842428681886624 26.00301143531518 16 26.442426849522683 25.405050788287788 22.809616463878434 25.342905898311102 17 24.67404300621921 25.32616047526764 24.415784303112535 25.58401221540062 18 25.467826831623043 24.430947717685598 25.378445613400995 24.722779837290364 19 25.959184470871893 24.420329700519787 24.987657496651345 24.63282833195697 20 26.433387399744795 23.5652897708656 24.33228660218043 25.669036227209176 21 27.48532822885806 23.47316507721631 24.084497354217397 24.95700933970823 22 26.725353732162795 23.39941869197146 24.460727111250765 25.41450046461498 23 25.08192657604101 23.46997463746142 25.099510618197122 26.348588168300452 24 25.278859886872734 24.371489194217542 24.770409938788195 25.579240980121526 25 25.376341897735944 23.92400915797507 24.72938183668278 25.970267107606208 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 193.0 1 193.0 2 465.0 3 737.0 4 737.0 5 737.0 6 2113.5 7 3490.0 8 3490.0 9 3490.0 10 3638.0 11 3786.0 12 3786.0 13 3786.0 14 4241.5 15 4697.0 16 4697.0 17 4697.0 18 8078.0 19 11459.0 20 11459.0 21 11459.0 22 19252.0 23 27045.0 24 27045.0 25 27045.0 26 41567.0 27 56089.0 28 56089.0 29 56089.0 30 70501.0 31 84913.0 32 84913.0 33 84913.0 34 108845.0 35 132777.0 36 132777.0 37 132777.0 38 157302.5 39 181828.0 40 181828.0 41 181828.0 42 215229.5 43 248631.0 44 248631.0 45 248631.0 46 282310.5 47 315990.0 48 315990.0 49 315990.0 50 330251.5 51 344513.0 52 344513.0 53 344513.0 54 323297.0 55 302081.0 56 302081.0 57 302081.0 58 281657.5 59 261234.0 60 261234.0 61 261234.0 62 231472.0 63 201710.0 64 201710.0 65 201710.0 66 167058.0 67 132406.0 68 132406.0 69 132406.0 70 100457.0 71 68508.0 72 68508.0 73 68508.0 74 52807.0 75 37106.0 76 37106.0 77 37106.0 78 29899.0 79 22692.0 80 22692.0 81 22692.0 82 15587.0 83 8482.0 84 8482.0 85 8482.0 86 6473.0 87 4464.0 88 4464.0 89 4464.0 90 3181.0 91 1898.0 92 1898.0 93 1898.0 94 1304.5 95 711.0 96 711.0 97 711.0 98 1037.5 99 1364.0 100 1364.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03778259674215594 2 0.005937846204902872 3 0.001830158076853625 4 0.004555060102391244 5 0.008866099127868671 6 0.013014457435403554 7 0.02265328997349931 8 0.03623712992170177 9 0.05026834184424623 10 0.05848371810034472 11 0.055718145895321466 12 0.06421821340781941 13 0.06629239256158685 14 0.06844791207432557 15 0.061167949946396696 16 0.06682110489490012 17 0.06417754322833377 18 0.07776138317653623 19 0.07511782150996989 20 0.07926617981750476 21 0.0762565865355677 22 0.07853411658676332 23 0.08260113453532693 24 0.07829009550984951 25 0.07845277622779205 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2458804.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.01403284150003 #Duplication Level Percentage of deduplicated Percentage of total 1 73.85936558315838 33.98567273595807 2 14.250032903437523 13.114029640224606 3 4.85511627548375 6.702104392482319 4 2.237899441956291 4.118991136726055 5 1.2007221170081068 2.7625033462763238 6 0.7661987460404808 2.1153536558053694 7 0.5103698470972375 1.6438922433950547 8 0.3468930571283433 1.2769558818553548 9 0.27034605762986186 1.1195741136915471 >10 1.5037636219445223 12.320122280039469 >50 0.1023930630445001 3.2429198447319973 >100 0.0766561800781157 7.749211094979646 >500 0.01322904733754361 4.2678344635735765 >1k 0.006925273102875057 5.310137803120849 >5k 8.878555260096225E-5 0.27069736713991294 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 6626 0.2694806092718249 No Hit TATCAACGCAGAGTACTTTTTTTTT 4518 0.18374787091610392 No Hit GCGCAAGACGGACCAGAGCGAAAGC 2870 0.11672341512377563 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 2861 0.1163573835084049 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 2798 0.11379516220080983 No Hit GAATAGGACCGCGGTTCTATTTTGT 2666 0.10842669850870586 No Hit GTATCTGATCGTCTTCGAACCTCCG 2619 0.10651520007288096 No Hit GGGTAGGCACACGCTGAGCCAGTCA 2611 0.10618983863699587 No Hit GAACTACGACGGTATCTGATCGTCT 2592 0.10541710522676878 No Hit GATTAAGAGGGACGGCCGGGGGCAT 2532 0.10297689445763061 No Hit GAATAACGCCGCCGCATCGCCAGTC 2510 0.10208215050894662 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.0670179485636106E-5 2 0.0 0.0 0.0 0.0 4.0670179485636106E-5 3 0.0 0.0 0.0 0.0 4.0670179485636106E-5 4 0.0 0.0 0.0 4.0670179485636106E-5 4.0670179485636106E-5 5 0.0 0.0 0.0 4.0670179485636106E-5 8.134035897127221E-5 6 0.0 0.0 0.0 4.0670179485636106E-5 1.6268071794254443E-4 7 0.0 0.0 0.0 8.134035897127221E-5 1.6268071794254443E-4 8 0.0 0.0 0.0 8.134035897127221E-5 2.0335089742818052E-4 9 0.0 0.0 0.0 1.6268071794254443E-4 2.0335089742818052E-4 10 0.0 0.0 0.0 1.6268071794254443E-4 2.0335089742818052E-4 11 0.0 0.0 0.0 1.6268071794254443E-4 2.0335089742818052E-4 12 0.0 0.0 0.0 1.6268071794254443E-4 2.846912563994527E-4 13 0.0 0.0 0.0 1.6268071794254443E-4 3.2536143588508885E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATTAG 335 0.0 12.190818 1 GCGTTAT 250 0.0 12.156797 1 CGAACGA 195 0.0 11.693986 16 ACTCTAA 390 0.0 11.692558 10 CGAACCT 450 0.0 11.612778 16 GTATCAA 4120 0.0 11.595245 1 GTAATAC 100 1.93702E-6 11.396997 3 TCGTCGC 170 1.0913936E-11 11.178074 13 ACTGCGT 95 1.3612658E-5 10.999789 8 CGTTATT 285 0.0 10.995984 2 GGTTCTA 540 0.0 10.908974 13 CGGTTCT 540 0.0 10.9087515 12 CGCATCG 515 0.0 10.885057 13 CGCCAGT 525 0.0 10.858922 18 CGCGTAA 245 0.0 10.857375 10 GTCTAGC 115 8.8525303E-7 10.736302 1 CGGTCCA 625 0.0 10.640228 10 TAAGGCC 170 1.4006218E-10 10.61593 4 AAGACGG 620 0.0 10.57087 5 CGTCGTA 405 0.0 10.555781 10 >>END_MODULE