##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064072_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2458804 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.32521665004612 32.0 32.0 32.0 32.0 32.0 2 31.430213632318804 32.0 32.0 32.0 32.0 32.0 3 31.490983421208036 32.0 32.0 32.0 32.0 32.0 4 31.566429451066455 32.0 32.0 32.0 32.0 32.0 5 31.518798163660055 32.0 32.0 32.0 32.0 32.0 6 35.10635333275853 36.0 36.0 36.0 36.0 36.0 7 35.120359329169794 36.0 36.0 36.0 36.0 36.0 8 35.0708852759309 36.0 36.0 36.0 36.0 36.0 9 35.1636332135461 36.0 36.0 36.0 36.0 36.0 10 35.0321176474416 36.0 36.0 36.0 36.0 36.0 11 35.16810449307875 36.0 36.0 36.0 36.0 36.0 12 35.07198337077701 36.0 36.0 36.0 36.0 36.0 13 35.11861864548781 36.0 36.0 36.0 36.0 36.0 14 35.048002606145104 36.0 36.0 36.0 36.0 36.0 15 35.03372127261872 36.0 36.0 36.0 36.0 36.0 16 35.03755037001729 36.0 36.0 36.0 36.0 36.0 17 34.995844321060154 36.0 36.0 36.0 36.0 36.0 18 34.99322760171205 36.0 36.0 36.0 36.0 36.0 19 34.99755409540573 36.0 36.0 36.0 36.0 36.0 20 34.984611217486226 36.0 36.0 36.0 36.0 36.0 21 34.979444884586165 36.0 36.0 36.0 36.0 36.0 22 34.97295677085282 36.0 36.0 36.0 36.0 36.0 23 34.911458579049004 36.0 36.0 36.0 32.0 36.0 24 34.88271167608317 36.0 36.0 36.0 32.0 36.0 25 34.859428811731235 36.0 36.0 36.0 32.0 36.0 26 34.79131805544484 36.0 36.0 36.0 32.0 36.0 27 34.79253328040787 36.0 36.0 36.0 32.0 36.0 28 34.7670786284714 36.0 36.0 36.0 32.0 36.0 29 34.7424015903667 36.0 36.0 36.0 32.0 36.0 30 34.72411221065201 36.0 36.0 36.0 32.0 36.0 31 34.71646214989076 36.0 36.0 36.0 32.0 36.0 32 34.68265140287717 36.0 36.0 36.0 32.0 36.0 33 34.64545730363217 36.0 36.0 36.0 32.0 36.0 34 34.63872801573448 36.0 36.0 36.0 32.0 36.0 35 34.597767451167314 36.0 36.0 36.0 32.0 36.0 36 34.57766784176372 36.0 36.0 36.0 32.0 36.0 37 34.57277887948775 36.0 36.0 36.0 32.0 36.0 38 34.53068402361473 36.0 36.0 36.0 32.0 36.0 39 34.52761464516895 36.0 36.0 36.0 32.0 36.0 40 34.501874081870696 36.0 36.0 36.0 32.0 36.0 41 34.4826444076063 36.0 36.0 36.0 32.0 36.0 42 34.415596769811664 36.0 36.0 36.0 32.0 36.0 43 34.40022547547507 36.0 36.0 36.0 32.0 36.0 44 34.33513407331369 36.0 36.0 36.0 32.0 36.0 45 34.30201431264956 36.0 36.0 36.0 32.0 36.0 46 34.280398112252946 36.0 36.0 36.0 32.0 36.0 47 34.245710922871446 36.0 36.0 36.0 32.0 36.0 48 34.195928996373844 36.0 36.0 36.0 32.0 36.0 49 34.1756195288441 36.0 36.0 36.0 32.0 36.0 50 33.58578520288726 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 1.0 18 3.0 19 9.0 20 25.0 21 81.0 22 326.0 23 887.0 24 2236.0 25 4913.0 26 9881.0 27 17772.0 28 29202.0 29 44239.0 30 63176.0 31 88409.0 32 125943.0 33 201777.0 34 415553.0 35 1454370.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.137999478562705 17.540182600670548 11.661119446967346 26.660698473799403 2 16.574270383883473 19.952879319243223 35.93112555631971 27.541724740553597 3 18.431767131271318 23.528780177916563 28.272733816958155 29.76671887385396 4 12.628700782982296 15.55252065638416 34.66372268794097 37.15505587269258 5 14.792272991259164 36.27934556800786 32.614026982223876 16.314354458509094 6 35.407611602249716 34.808619980730434 16.120553164370087 13.663215252649769 7 31.252183482925215 29.96403531640015 19.980714177357175 18.803067023317464 8 29.00971366566835 32.01690740701577 18.663016653625096 20.310362273690785 9 27.597483939084842 13.995690517674733 18.045123484807814 40.36170205843261 10 16.34000086221552 26.15750399994794 30.55207822409632 26.950416913740217 11 38.042820022588224 20.790848229809384 21.74968877132491 19.416642976277483 12 25.40011387668781 23.19269562388157 27.771636570684887 23.63555392874573 13 29.684911082569617 19.001438914461456 25.04207340334586 26.27157659962307 14 24.292305783930747 19.04908705280432 24.452302855667103 32.206304307597826 15 25.711040079522117 26.598220920353015 21.7577511899644 25.932987810160462 16 26.495766818543597 25.345078410550887 22.85881383071097 25.300340940194545 17 24.74052425488164 25.335569650935984 24.368758144203444 25.555147949978934 18 25.604086554592797 24.32984449699955 25.395041066864053 24.6710278815436 19 26.063199832113497 24.28294406548875 25.002033508974282 24.65182259342347 20 26.513946499679314 23.41974036812431 24.416003162532448 25.650309969663926 21 27.567101729133352 23.47417687623739 24.07629888352223 24.882422511107023 22 26.7697141818309 23.381843426938577 24.526100322880946 25.322342068349574 23 25.141401599250358 23.29755809493907 25.23189374229546 26.329146563515117 24 25.393057908783074 24.256648980518122 24.80744656535429 25.542846545344517 25 25.483678371473122 23.670001407212247 24.960854283578485 25.885465937736146 26 25.305917426901537 24.66992316984386 25.135052691089083 24.88910671216552 27 26.015063465361678 24.008404564430112 24.39499663231739 25.58153533789082 28 25.22200666203009 23.889193926896624 25.329258025549983 25.559541385523303 29 25.066385331414203 24.1988310325039 25.24078282022051 25.494000815861384 30 24.940070394408796 24.49565179902697 25.404092701969077 25.160185104595158 31 25.63244468269779 24.232073582322542 24.29292037773821 25.84256135724146 32 25.579334346594802 24.145014879651136 24.196667625157247 26.078983148596812 33 25.063621355625994 23.855700217229767 24.775866143189436 26.30481228395481 34 25.84282229912723 23.881324243014593 24.886923468306644 25.388929989551528 35 26.256276604138552 23.837592842495365 24.994814404486213 24.91131614887987 36 25.11742397743117 24.454244915423825 24.53062947711961 25.897701630025395 37 26.1415589650066 24.311217092138556 24.46023766014932 25.08698628270552 38 25.2583267544154 23.98919552544099 24.905078517911132 25.84739920223248 39 25.94930479352046 23.99737421574218 24.2902532808068 25.76306770993056 40 25.9699366708924 24.211111124668175 24.796247513465214 25.02270469097421 41 25.021586391320703 24.71565547184008 25.11549685304375 25.147261283795462 42 26.249846975773572 24.58278783501121 24.590962684051032 24.576402505164186 43 25.674809498090102 23.63651226955939 24.753087725234753 25.93559050711576 44 25.07313589387253 24.38681963690108 24.495410120226342 26.044634349000052 45 25.2547502197227 24.56274064261925 24.542771397696665 25.639737739961387 46 25.17269722460258 24.331793411618673 24.68009580349303 25.815413560285716 47 25.33934774465676 24.129836124779917 24.9781088930563 25.552707237507022 48 26.14486849843457 24.74647728076904 23.989020455076027 25.119633765720362 49 25.28531252097064 24.824883733698826 24.227883983821343 25.661919761509193 50 25.293368109514873 24.95096127292863 24.2819278411857 25.473742776370795 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 20.0 1 28.0 2 36.0 3 114.0 4 192.0 5 257.5 6 323.0 7 340.5 8 358.0 9 445.0 10 532.0 11 875.5 12 1219.0 13 2326.5 14 3434.0 15 4664.0 16 5894.0 17 6464.0 18 7034.0 19 7208.0 20 7382.0 21 7637.0 22 7892.0 23 8548.5 24 9205.0 25 9874.0 26 10543.0 27 12751.0 28 14959.0 29 17696.0 30 20433.0 31 23983.0 32 27533.0 33 32455.5 34 37378.0 35 44126.0 36 50874.0 37 62972.5 38 75071.0 39 84945.0 40 94819.0 41 105568.0 42 116317.0 43 122051.0 44 127785.0 45 142148.0 46 156511.0 47 168146.5 48 179782.0 49 188292.5 50 196803.0 51 193476.5 52 190150.0 53 189564.0 54 188978.0 55 190570.5 56 192163.0 57 187220.5 58 182278.0 59 167152.0 60 152026.0 61 134863.5 62 117701.0 63 102443.5 64 87186.0 65 74137.5 66 61089.0 67 52684.5 68 44280.0 69 39747.5 70 35215.0 71 27008.5 72 18802.0 73 16346.0 74 13890.0 75 10810.5 76 7731.0 77 6711.0 78 5691.0 79 4779.0 80 3867.0 81 3148.0 82 2429.0 83 1994.0 84 1559.0 85 1131.5 86 704.0 87 516.5 88 329.0 89 233.5 90 138.0 91 119.0 92 100.0 93 81.5 94 63.0 95 56.5 96 50.0 97 39.5 98 29.0 99 28.0 100 27.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008744088589411763 2 4.473719743419972E-4 3 4.473719743419972E-4 4 0.0 5 0.0 6 2.0335089742818052E-4 7 1.2201053845690831E-4 8 0.0 9 0.0016268071794254442 10 8.947439486839944E-4 11 4.0670179485636106E-5 12 1.6268071794254443E-4 13 2.4402107691381662E-4 14 3.66031615370725E-4 15 0.0047584109998194245 16 6.100526922845416E-4 17 0.0 18 3.66031615370725E-4 19 0.0 20 6.100526922845416E-4 21 0.0 22 1.2201053845690831E-4 23 0.0010980948461121749 24 2.4402107691381662E-4 25 0.0017081475383967165 26 0.005449804051075239 27 0.005693825127989055 28 0.0038229968716497935 29 0.0021555195127387137 30 0.0034976354357647054 31 0.006913930512558138 32 0.0031316038203939803 33 0.0047584109998194245 34 0.0028875827434801634 35 0.0028469125639945273 36 0.007808674461242132 37 0.003375624897307797 38 0.007849344640727769 39 0.0044737197434199715 40 0.0024808809486238023 41 0.003212944179365252 42 0.0017488177178823527 43 0.0014641264614829 44 0.0010167544871409026 45 9.354141281696305E-4 46 8.540737691983582E-4 47 0.0017488177178823527 48 0.0020335089742818052 49 3.66031615370725E-4 50 0.0013421159230259916 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2458804.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.121792716694515 #Duplication Level Percentage of deduplicated Percentage of total 1 74.84797299808528 36.76666614876692 2 14.035736480477478 13.78921076040324 3 4.658304575880768 6.864728153629339 4 2.0766179719919196 4.080287902877984 5 1.1456104244678835 2.8137218902397896 6 0.689470579136529 2.032081852356234 7 0.46129006899552505 1.5861576606027525 8 0.32894961766359393 1.2926875946485579 9 0.23858080459858658 1.054756514670657 >10 1.348695190277888 11.777758300055389 >50 0.08425450704434757 2.8596474352085473 >100 0.06773940049794576 7.0727693789096495 >500 0.011602268371245172 3.944080624785144 >1k 0.005175112510914608 4.065445782845874 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2801 0.11391717273926674 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2668 0.10850803886767713 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2661 0.10822334761127768 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2651 0.10781664581642131 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2616 0.10639318953442406 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.134035897127221E-5 2 0.0 0.0 0.0 0.0 8.134035897127221E-5 3 0.0 0.0 0.0 0.0 8.134035897127221E-5 4 0.0 0.0 0.0 0.0 8.134035897127221E-5 5 0.0 0.0 0.0 0.0 8.134035897127221E-5 6 0.0 0.0 0.0 0.0 8.134035897127221E-5 7 0.0 0.0 0.0 0.0 8.134035897127221E-5 8 0.0 0.0 0.0 0.0 1.2201053845690831E-4 9 0.0 0.0 0.0 8.134035897127221E-5 1.6268071794254443E-4 10 0.0 0.0 0.0 8.134035897127221E-5 2.4402107691381662E-4 11 0.0 0.0 0.0 8.134035897127221E-5 2.4402107691381662E-4 12 0.0 0.0 0.0 8.134035897127221E-5 3.2536143588508885E-4 13 0.0 0.0 0.0 8.134035897127221E-5 4.473719743419972E-4 14 0.0 0.0 0.0 8.134035897127221E-5 4.473719743419972E-4 15 0.0 0.0 0.0 8.134035897127221E-5 5.287123333132694E-4 16 0.0 0.0 0.0 8.134035897127221E-5 6.507228717701777E-4 17 0.0 0.0 0.0 8.134035897127221E-5 6.507228717701777E-4 18 0.0 0.0 0.0 1.2201053845690831E-4 7.3206323074145E-4 19 0.0 0.0 0.0 1.2201053845690831E-4 7.3206323074145E-4 20 0.0 0.0 0.0 2.0335089742818052E-4 7.72733410227086E-4 21 0.0 0.0 0.0 2.846912563994527E-4 8.134035897127221E-4 22 0.0 0.0 0.0 4.0670179485636105E-4 8.947439486839944E-4 23 0.0 0.0 0.0 9.354141281696305E-4 0.0010980948461121749 24 0.0 0.0 0.0 0.0020335089742818052 0.0010980948461121749 25 0.0 0.0 0.0 0.002277530051195622 0.0010980948461121749 26 0.0 0.0 0.0 0.0025215511281094388 0.0010980948461121749 27 0.0 0.0 0.0 0.003009593281937072 0.0010980948461121749 28 0.0 0.0 0.0 0.006141197102331052 0.0010980948461121749 29 0.0 0.0 0.0 0.010899608102150477 0.0010980948461121749 30 0.0 0.0 0.0 0.022124577640186043 0.0010980948461121749 31 0.0 0.0 0.0 0.049739629510932956 0.0010980948461121749 32 0.0 0.0 0.0 0.07645993743299588 0.001138765025597811 33 0.0 0.0 0.0 0.10415632966271407 0.001138765025597811 34 0.0 0.0 0.0 0.1355130380461395 0.0012201053845690831 35 0.0 0.0 0.0 0.17236022066012582 0.0012201053845690831 36 0.0 0.0 0.0 0.2264108891965362 0.0012201053845690831 37 0.0 0.0 0.0 0.30193541250136247 0.0012201053845690831 38 0.0 0.0 0.0 0.4062950930615047 0.0012607755640547194 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4970 0.0 22.752895 1 CGACTAT 55 0.004485532 19.99952 14 AACGCAG 6260 0.0 17.8171 6 GTCCTAT 830 0.0 17.229202 1 TAACGGC 230 0.0 17.219078 36 TTAACGG 220 1.8189894E-12 17.001665 35 ATACCGT 680 0.0 16.822783 6 TACCGTC 670 0.0 16.745525 7 CTATTCC 790 0.0 16.708118 4 CCGTCGT 690 0.0 16.260479 9 GTATTAG 545 0.0 16.147058 1 GGTATCA 2475 0.0 16.089157 1 ACCGTCG 700 0.0 16.02786 8 TCAACGC 6980 0.0 16.010752 4 TATCAAC 7100 0.0 15.894747 2 ATCAACG 7070 0.0 15.83773 3 CAACGCA 7140 0.0 15.682777 5 CGTCGTA 705 0.0 15.602462 10 CCTATTC 875 0.0 15.336151 3 ACGCAGA 7515 0.0 14.841657 7 >>END_MODULE