##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064071_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2870938 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.32159141019416 32.0 32.0 32.0 32.0 32.0 2 31.421221914231516 32.0 32.0 32.0 32.0 32.0 3 31.50062279296871 32.0 32.0 32.0 32.0 32.0 4 31.581129233720826 32.0 32.0 32.0 32.0 32.0 5 31.530079019470293 32.0 32.0 32.0 32.0 32.0 6 35.13540940278055 36.0 36.0 36.0 36.0 36.0 7 35.152582535742674 36.0 36.0 36.0 36.0 36.0 8 35.1006103231766 36.0 36.0 36.0 36.0 36.0 9 35.205711164783075 36.0 36.0 36.0 36.0 36.0 10 35.06625500097877 36.0 36.0 36.0 36.0 36.0 11 35.20947892291648 36.0 36.0 36.0 36.0 36.0 12 35.10838583069366 36.0 36.0 36.0 36.0 36.0 13 35.15662233040212 36.0 36.0 36.0 36.0 36.0 14 35.09770674253502 36.0 36.0 36.0 36.0 36.0 15 35.06844940573429 36.0 36.0 36.0 36.0 36.0 16 35.082445876574134 36.0 36.0 36.0 36.0 36.0 17 35.038709996523785 36.0 36.0 36.0 36.0 36.0 18 35.042192133720754 36.0 36.0 36.0 36.0 36.0 19 35.03734145425641 36.0 36.0 36.0 36.0 36.0 20 35.035151229319474 36.0 36.0 36.0 36.0 36.0 21 35.030586170791565 36.0 36.0 36.0 36.0 36.0 22 35.0205981459718 36.0 36.0 36.0 36.0 36.0 23 34.96618700926317 36.0 36.0 36.0 36.0 36.0 24 34.938434407151945 36.0 36.0 36.0 36.0 36.0 25 34.913063604996 36.0 36.0 36.0 32.0 36.0 26 34.8515474733345 36.0 36.0 36.0 32.0 36.0 27 34.85167635107411 36.0 36.0 36.0 32.0 36.0 28 34.826969095118045 36.0 36.0 36.0 32.0 36.0 29 34.80052582117761 36.0 36.0 36.0 32.0 36.0 30 34.78014607072671 36.0 36.0 36.0 32.0 36.0 31 34.776703293488055 36.0 36.0 36.0 32.0 36.0 32 34.734461698580745 36.0 36.0 36.0 32.0 36.0 33 34.706611219051055 36.0 36.0 36.0 32.0 36.0 34 34.695319439151945 36.0 36.0 36.0 32.0 36.0 35 34.65076187643202 36.0 36.0 36.0 32.0 36.0 36 34.629567409675865 36.0 36.0 36.0 32.0 36.0 37 34.618674802451324 36.0 36.0 36.0 32.0 36.0 38 34.583451471261306 36.0 36.0 36.0 32.0 36.0 39 34.57895119992142 36.0 36.0 36.0 32.0 36.0 40 34.55986858650378 36.0 36.0 36.0 32.0 36.0 41 34.54069854521414 36.0 36.0 36.0 32.0 36.0 42 34.464917737687124 36.0 36.0 36.0 32.0 36.0 43 34.45776537145699 36.0 36.0 36.0 32.0 36.0 44 34.3874918232299 36.0 36.0 36.0 32.0 36.0 45 34.354919890293694 36.0 36.0 36.0 32.0 36.0 46 34.325982657932705 36.0 36.0 36.0 32.0 36.0 47 34.29084187815968 36.0 36.0 36.0 32.0 36.0 48 34.24360017527373 36.0 36.0 36.0 32.0 36.0 49 34.21609766564099 36.0 36.0 36.0 32.0 36.0 50 33.61445388231999 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 9.0 19 10.0 20 22.0 21 94.0 22 284.0 23 826.0 24 2150.0 25 4900.0 26 9874.0 27 18710.0 28 30709.0 29 47888.0 30 69535.0 31 99270.0 32 144986.0 33 235278.0 34 496514.0 35 1709877.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.845301996706695 17.930369735083396 11.766806227241865 26.457522040968033 2 16.197323162395392 20.388585560403005 36.53219781081011 26.881893466391492 3 17.974112212458056 24.43376342640309 28.750519431166705 28.841604929972142 4 12.334818794414927 15.849558576325926 35.697461944493405 36.11816068476574 5 14.508219961559602 36.664741627997536 33.07337183875096 15.753666571691898 6 34.43079305577664 35.57421925206893 16.511496436872612 13.483491255281821 7 30.34922793391556 30.496427468004306 20.797594370889186 18.35675022719095 8 28.519320166440377 32.33427541799927 19.283000886818176 19.863403528742175 9 27.802288059788832 13.74100283395056 18.275010240676803 40.181698865583805 10 16.023624556804442 26.43575506172083 31.35273089273753 26.1878894887372 11 37.45522803182376 20.940027593778616 22.48816327213032 19.116581102267308 12 25.149202315344066 23.46511623046716 28.44036122042513 22.945320233763645 13 29.370050380922123 19.249385564528264 25.453860215233544 25.92670383931607 14 24.066921915143812 19.29094007233898 24.989898736575768 31.652239275941437 15 25.365552050912726 26.76847354130128 22.238857180676433 25.627117227109565 16 26.065721092890083 25.4829114012233 23.30472461789252 25.14664288799409 17 24.248137716662637 25.54980288672204 24.9161075578783 25.285951838737024 18 25.160549188467694 24.58265222348043 25.91316323960867 24.343635348443204 19 25.800626833460004 24.567232033572303 25.38233148887228 24.249809644095414 20 26.06506836312693 23.94031318891268 24.755174214249863 25.23944423371053 21 27.251093545036497 23.752620223773555 24.43208456608955 24.564201665100395 22 26.295117689840524 23.69572153471899 24.93489928023474 25.074261495205747 23 24.74651791956078 23.691243865627413 25.50537059116734 26.056867623644465 24 25.03532840877782 24.659908551930585 25.17152173223975 25.13324130705185 25 25.2166234743354 24.05499359081536 25.29962938193167 25.42875355291757 26 25.093319975699885 24.78030269251991 25.48582818256299 24.640549149217215 27 25.558511805609257 24.43396403871596 24.775163598134846 25.232360557539934 28 24.927120151343466 24.238118642715794 25.667187191399254 25.167574014541483 29 24.847144733638398 24.4509558657305 25.475738395522168 25.22616100510893 30 24.830171538763246 24.66513261981345 25.611999005168524 24.89269683625478 31 25.39583233910064 24.430814118951915 24.613276864399666 25.560076677547784 32 25.105857666547305 24.540586783780054 24.533585338904764 25.819970210767874 33 24.779356312950547 24.274341169114585 25.103446594247952 25.84285592368691 34 25.561008437550182 24.184729507599993 25.18457032168443 25.069691733165396 35 25.999540901400735 24.111767867487004 25.194341871011407 24.694349360100848 36 25.041809966604276 24.724817093370426 24.800512204748134 25.432860735277163 37 25.856384536956178 24.548465089578965 24.775891479051797 24.819258894413057 38 24.97600758560894 24.369639589521576 25.20316480411217 25.451188020757314 39 25.558476536687845 24.448716577707756 24.554401367423235 25.438405518181163 40 25.65037776005183 24.62685527383685 25.102704058351648 24.620062907759667 41 24.772322814116144 25.05262395235403 25.311781460554588 24.86327177297524 42 26.01119726745711 25.016763158600554 24.756773099806715 24.21526647413562 43 25.26823535394736 24.165965084731475 25.067879576145817 25.497919985175344 44 25.016101250655282 24.63806582964546 24.67321166395845 25.672621255740808 45 25.125640218245454 24.947298683059227 24.71737046552714 25.20969063316818 46 25.037618865164234 24.718520324636874 24.78264655682887 25.461214253370024 47 25.12397822678654 24.525901060550698 25.197823514638607 25.152297198024147 48 25.855708397498038 25.135542677525642 24.15597796763138 24.85277095734494 49 24.93788587302002 25.142732742931283 24.45915515034353 25.460226233705164 50 24.94912741588172 25.31925550820684 24.499755825529153 25.231861250382288 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 53.0 1 54.5 2 56.0 3 212.5 4 369.0 5 443.0 6 517.0 7 518.5 8 520.0 9 707.0 10 894.0 11 1340.0 12 1786.0 13 3342.5 14 4899.0 15 6641.0 16 8383.0 17 9028.0 18 9673.0 19 9728.0 20 9783.0 21 10593.0 22 11403.0 23 12512.0 24 13621.0 25 14807.0 26 15993.0 27 19370.0 28 22747.0 29 26826.5 30 30906.0 31 34615.5 32 38325.0 33 44257.5 34 50190.0 35 58441.0 36 66692.0 37 81036.0 38 95380.0 39 105895.0 40 116410.0 41 129748.5 42 143087.0 43 146642.5 44 150198.0 45 166482.0 46 182766.0 47 196142.5 48 209519.0 49 218223.5 50 226928.0 51 221987.0 52 217046.0 53 215919.5 54 214793.0 55 216042.5 56 217292.0 57 211134.0 58 204976.0 59 188775.5 60 172575.0 61 151778.5 62 130982.0 63 112833.5 64 94685.0 65 80886.5 66 67088.0 67 57276.0 68 47464.0 69 41993.5 70 36523.0 71 28255.5 72 19988.0 73 17025.0 74 14062.0 75 10928.5 76 7795.0 77 6802.0 78 5809.0 79 4707.5 80 3606.0 81 2924.0 82 2242.0 83 1858.0 84 1474.0 85 1089.0 86 704.0 87 507.5 88 311.0 89 231.5 90 152.0 91 125.0 92 98.0 93 86.5 94 75.0 95 61.0 96 47.0 97 36.0 98 25.0 99 26.5 100 28.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009091105415721272 2 4.52813679710255E-4 3 3.134863936455611E-4 4 0.0 5 0.0 6 1.741591075808673E-4 7 1.741591075808673E-4 8 0.0 9 0.0011842819315498977 10 9.404591809366834E-4 11 3.483182151617346E-5 12 1.3932728606469384E-4 13 3.483182151617346E-4 14 3.483182151617346E-4 15 0.004980950476812805 16 6.269727872911222E-4 17 0.0 18 3.8315003667790807E-4 19 0.0 20 6.618046088072957E-4 21 0.0 22 6.966364303234692E-5 23 8.707955379043365E-4 24 6.618046088072957E-4 25 0.0020202456479380604 26 0.005921409657749488 27 0.006409055158975917 28 0.004075323117392295 29 0.002960704828874744 30 0.003483182151617346 31 0.007488841625977294 32 0.003552845794649693 33 0.00463263226165107 34 0.0028213775428100503 35 0.0033090230440364784 36 0.0073495143399126 37 0.0041449867604246415 38 0.008324805342365457 39 0.004771959547715764 40 0.0023685638630997954 41 0.0033786866870688255 42 0.002055077469454234 43 0.0015674319682278059 44 0.0014977683251954587 45 0.0014629365036792853 46 0.0013236092176145914 47 0.0024730593276483157 48 0.0024730593276483157 49 4.52813679710255E-4 50 0.0013932728606469384 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2870938.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.968627616853034 #Duplication Level Percentage of deduplicated Percentage of total 1 70.72265055691192 31.803005369705957 2 15.162973838593619 13.63716248223602 3 5.690594442540064 7.676946672153526 4 2.7481907153771576 4.943294595995535 5 1.5202135049119057 3.418095750024723 6 0.9408247764828721 2.538455941582036 7 0.6132028102459973 1.9302422179292031 8 0.4427023909828204 1.592617517215754 9 0.33228204626382035 1.3448040841983302 >10 1.6419620676165876 13.010286616371694 >50 0.09090440519195181 2.8444725167138007 >100 0.07583565931062988 7.244390139891006 >500 0.011593634581751815 3.6062013101598227 >1k 0.006069150989058846 4.410024785822631 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 3051 0.10627188744584523 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2998 0.10442580090548803 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2989 0.10411231451184248 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 3.483182151617346E-5 8 0.0 0.0 0.0 0.0 3.483182151617346E-5 9 0.0 0.0 0.0 0.0 3.483182151617346E-5 10 0.0 0.0 0.0 0.0 3.483182151617346E-5 11 0.0 0.0 0.0 3.483182151617346E-5 3.483182151617346E-5 12 0.0 0.0 0.0 3.483182151617346E-5 1.741591075808673E-4 13 0.0 0.0 0.0 3.483182151617346E-5 2.786545721293877E-4 14 0.0 0.0 0.0 3.483182151617346E-5 2.786545721293877E-4 15 0.0 0.0 0.0 3.483182151617346E-5 3.8315003667790807E-4 16 0.0 0.0 0.0 6.966364303234692E-5 4.179818581940815E-4 17 0.0 0.0 0.0 6.966364303234692E-5 4.179818581940815E-4 18 0.0 0.0 0.0 1.0449546454852037E-4 4.179818581940815E-4 19 0.0 0.0 0.0 1.3932728606469384E-4 4.8764550122642846E-4 20 0.0 0.0 0.0 2.0899092909704075E-4 5.921409657749488E-4 21 0.0 0.0 0.0 3.483182151617346E-4 5.921409657749488E-4 22 0.0 0.0 0.0 4.8764550122642846E-4 5.921409657749488E-4 23 0.0 0.0 0.0 0.0010101228239690304 5.921409657749488E-4 24 0.0 0.0 0.0 0.001741591075808673 5.921409657749488E-4 25 0.0 0.0 0.0 0.002020245647938061 5.921409657749488E-4 26 0.0 0.0 0.0 0.002577554792196836 6.269727872911223E-4 27 0.0 0.0 0.0 0.0031348639364556113 6.966364303234692E-4 28 0.0 0.0 0.0 0.005398932335006886 6.966364303234692E-4 29 0.0 0.0 0.0 0.010937191956078467 6.966364303234692E-4 30 0.0 0.0 0.0 0.021595729340027545 6.966364303234692E-4 31 0.0 0.0 0.0 0.04740610908351208 6.966364303234692E-4 32 0.0 0.0 0.0 0.07440077075854651 6.966364303234692E-4 33 0.0 0.0 0.0 0.09958417771473992 6.966364303234692E-4 34 0.0 0.0 0.0 0.12884290778832563 7.663000733558161E-4 35 0.0 0.0 0.0 0.16315225198175648 7.663000733558161E-4 36 0.0 0.0 0.0 0.21160331571075378 7.663000733558161E-4 37 0.0 0.0 0.0 0.2843321590365239 7.663000733558161E-4 38 0.0 0.0 0.0 0.3807814728148083 9.0562735942051E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 6115 0.0 20.25524 1 ATACCGT 975 0.0 18.50107 6 ACCGTCG 960 0.0 18.33217 8 TTACGCC 75 0.0012923067 17.598274 4 CCGTCGT 985 0.0 17.420824 9 TACCGTC 960 0.0 17.41526 7 GTCTTAG 455 0.0 17.406702 1 AACGCAG 7135 0.0 17.358093 6 CGTCGTA 965 0.0 17.09796 10 GTATTAG 735 0.0 17.061333 1 GTATTAT 290 0.0 16.68976 1 CGTAAGA 80 0.001990553 16.49838 2 CGCAATA 875 0.0 16.092371 36 ATACGAA 890 0.0 15.57259 40 GTCGTAG 1080 0.0 15.277341 11 TCTAGCG 885 0.0 15.164201 28 CAATACG 900 0.0 15.155651 38 TACGAAT 945 0.0 15.131844 41 CGAATGC 935 0.0 15.058394 43 GTATATA 380 0.0 15.052727 1 >>END_MODULE