##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064069_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 431773 Sequences flagged as poor quality 0 Sequence length 25 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.043374643620606 32.0 32.0 32.0 32.0 32.0 2 30.8615476187719 32.0 32.0 32.0 32.0 32.0 3 30.90452390492226 32.0 32.0 32.0 32.0 32.0 4 30.866476134450277 32.0 32.0 32.0 32.0 32.0 5 30.90478098445248 32.0 32.0 32.0 32.0 32.0 6 34.46295159725133 36.0 36.0 36.0 32.0 36.0 7 34.29427963304792 36.0 36.0 36.0 32.0 36.0 8 34.23807648926635 36.0 36.0 36.0 32.0 36.0 9 34.25282961185623 36.0 36.0 36.0 32.0 36.0 10 34.113471662192865 36.0 36.0 36.0 32.0 36.0 11 34.428213436226905 36.0 36.0 36.0 32.0 36.0 12 34.24287067510011 36.0 36.0 36.0 32.0 36.0 13 34.30969282470187 36.0 36.0 36.0 32.0 36.0 14 34.26458347326025 36.0 36.0 36.0 32.0 36.0 15 34.24536504135275 36.0 36.0 36.0 32.0 36.0 16 34.23417397567703 36.0 36.0 36.0 32.0 36.0 17 34.15603569468216 36.0 36.0 36.0 32.0 36.0 18 34.171027368547826 36.0 36.0 36.0 32.0 36.0 19 34.085688544675094 36.0 36.0 36.0 32.0 36.0 20 34.02228717404748 36.0 36.0 36.0 32.0 36.0 21 33.97296264472304 36.0 36.0 36.0 32.0 36.0 22 33.96460408594331 36.0 36.0 36.0 32.0 36.0 23 34.042022081047214 36.0 36.0 36.0 32.0 36.0 24 34.0332396884474 36.0 36.0 36.0 32.0 36.0 25 33.71489880099033 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 4 3.0 5 4.0 6 20.0 7 5.0 8 24.0 9 25.0 10 38.0 11 14.0 12 29.0 13 20.0 14 134.0 15 134.0 16 178.0 17 246.0 18 336.0 19 394.0 20 605.0 21 803.0 22 1325.0 23 1810.0 24 2595.0 25 3553.0 26 5002.0 27 6390.0 28 8513.0 29 11169.0 30 15061.0 31 20123.0 32 28574.0 33 40805.0 34 89566.0 35 194275.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.75301204819277 19.511816496756257 12.506719184430029 22.228452270620945 2 13.113356788645097 21.802090595562635 44.86419003898152 20.22036257681074 3 18.984920177224396 29.800194085263186 29.516709166243988 21.698176571268434 4 9.806537382777126 17.026702149095684 39.36372500654294 33.803035461584244 5 10.223958900333772 42.22675693892725 33.89008433492152 13.659199825817463 6 26.963239211507723 40.2703203539413 19.952282782423385 12.814157652127586 7 25.945574039368125 33.943136986904314 21.7029714897294 18.408317483998157 8 26.037870485996073 36.280231402431255 20.083219616846876 17.598678494725796 9 29.011268604319746 13.678041862760773 21.195774331310407 36.11491520160907 10 16.58683314678476 28.188068770378404 32.66361236828628 22.561485714550557 11 32.78049933493074 22.90271450221767 26.97215051421209 17.344635648639507 12 26.357065221169822 26.43377419751055 31.45299779143038 15.756162789889247 13 29.8025246988971 22.536425513966492 28.192084765363372 19.468965021773034 14 21.100996101807258 24.500210901034112 29.360900338832213 25.03789265832642 15 21.477236386557347 34.206135492512544 26.66098136363847 17.65564675729163 16 18.758574977751408 28.3243102936814 32.63682883417383 20.280285894393355 17 17.70622343556633 29.259927044853047 30.340580952866524 22.693268566714096 18 17.915187139002974 26.684575518491393 37.14317501228433 18.257062330221302 19 22.721636486264114 25.11536384516793 31.232255058974047 20.930744609593916 20 23.326642530328805 26.36369536294902 32.10797379924809 18.201688307474075 21 24.157049447072648 24.141287946392353 29.378741907744228 22.322920698790767 22 23.276285658659596 28.45762680437221 29.87933767835124 18.386749858616948 23 20.40128507651583 28.832629446425013 32.02144575743949 18.74463971961967 24 22.05438556640815 27.611383327384235 32.39839791580714 17.935833190400473 25 20.668850118328248 28.640998361252308 32.97406050154487 17.71609101887457 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 329.0 1 329.0 2 735.5 3 1142.0 4 1142.0 5 1142.0 6 3324.5 7 5507.0 8 5507.0 9 5507.0 10 5007.5 11 4508.0 12 4508.0 13 4508.0 14 3259.5 15 2011.0 16 2011.0 17 2011.0 18 4006.0 19 6001.0 20 6001.0 21 6001.0 22 9956.5 23 13912.0 24 13912.0 25 13912.0 26 22349.0 27 30786.0 28 30786.0 29 30786.0 30 39133.5 31 47481.0 32 47481.0 33 47481.0 34 46993.0 35 46505.0 36 46505.0 37 46505.0 38 45487.5 39 44470.0 40 44470.0 41 44470.0 42 45087.0 43 45704.0 44 45704.0 45 45704.0 46 52117.5 47 58531.0 48 58531.0 49 58531.0 50 54262.0 51 49993.0 52 49993.0 53 49993.0 54 37141.5 55 24290.0 56 24290.0 57 24290.0 58 20794.5 59 17299.0 60 17299.0 61 17299.0 62 15056.5 63 12814.0 64 12814.0 65 12814.0 66 10930.5 67 9047.0 68 9047.0 69 9047.0 70 6946.5 71 4846.0 72 4846.0 73 4846.0 74 4127.0 75 3408.0 76 3408.0 77 3408.0 78 2600.5 79 1793.0 80 1793.0 81 1793.0 82 1214.0 83 635.0 84 635.0 85 635.0 86 471.0 87 307.0 88 307.0 89 307.0 90 223.0 91 139.0 92 139.0 93 139.0 94 99.5 95 60.0 96 60.0 97 60.0 98 157.5 99 255.0 100 255.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04006735020485301 2 0.006948095411246187 3 9.264127214994916E-4 4 0.002316031803748729 5 0.009727333575744663 6 0.014591000363616994 7 0.024086730758986784 8 0.0333508579739817 9 0.050952699682472034 10 0.057900795093718226 11 0.055353160109594624 12 0.06299606506196544 13 0.06392247778346492 14 0.06739652548908802 15 0.0581323982740931 16 0.06600690640683878 17 0.06369087460309006 18 0.07619744634333318 19 0.07226019227696034 20 0.07758706542558243 21 0.07920828768820654 22 0.0743446209003342 23 0.08314554175457937 24 0.07758706542558243 25 0.08013470040970602 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 431773.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.01822472805316 #Duplication Level Percentage of deduplicated Percentage of total 1 68.63908941998518 19.917845219180663 2 14.548054121506592 8.443174077075168 3 5.683774795204539 4.94799162932669 4 2.9847836071332394 3.4645248590560596 5 1.7042215196076345 2.47267415211793 6 1.0813056069154354 1.882654146070561 7 0.776570126197411 1.5774280507362353 8 0.5640033140824295 1.3093099932328554 9 0.44336319388925 1.1579051516783094 >10 2.887028393454014 16.729090132960238 >50 0.3546873641100608 7.180338218408666 >100 0.3003658759130245 16.946061816959766 >500 0.01837344453723288 3.565017641998608 >1k 0.012781526634596786 7.607565444769511 >5k 0.0015976908293245983 2.798419466428714 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 6971 1.6145057703932388 No Hit TATCAACGCAGAGTACTTTTTTTTT 5101 1.1814078230922267 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 4615 1.0688486774300385 No Hit GTACATGGGGTGGTATCAACGCAAA 3288 0.7615112570725822 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 3183 0.7371929231332205 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 2761 0.6394563810150241 No Hit GGTATCAACGCAGAGTACTTTTTTT 2414 0.5590900774249432 No Hit GTATCAACGCAGAGTACATGGGGTG 1979 0.4583426939618735 No Hit GTCCTACAGTGGACATTTCTAAATT 1800 0.41688572467477125 No Hit GTCCTAAAGTGTGTATTTCTCATTT 1781 0.4124852642476486 No Hit CTGTAGGACGTGGAATATGGCAAGA 1650 0.3821452476185403 No Hit GTCCTACAGTGTGCATTTCTCATTT 1541 0.35690050095767917 No Hit CTTTAGGACGTGAAATATGGCGAGG 1517 0.3513420246286822 No Hit TATCAACGCAGAGTACATGGGGTGG 1425 0.33003453203419386 No Hit GCAGAGTACTTTTTTTTTTTTTTTT 1412 0.3270236906893206 No Hit GTACATGGGTGGTATCAACGCAAAA 1376 0.3186859761958251 No Hit GTACATGGGAGTGGTATCAACGCAA 1049 0.24295173621324168 No Hit GGTATCAACGCAGAGTACATGGGGT 1027 0.23785646624499449 No Hit CTGTAGGACCTGGAATATGGCGAGA 989 0.2290555453907493 No Hit GATATACACTGTTCTACAAATCCCG 961 0.22257065634025286 No Hit CTGAAGGACCTGGAATATGGCGAGA 860 0.19917873512239068 No Hit ACGCAGAGTACATGGGGTGGTATCA 834 0.193157052432644 No Hit ATTTAGAAATGTCCACTGTAGGACG 784 0.18157689341390035 No Hit ATCAACGCAGAGTACTTTTTTTTTT 776 0.17972406797090137 No Hit TTGTAGAACAGTGTATATCAATGAG 714 0.16536467078765926 No Hit GTATTAGAGGCACTGCCTGCCCAGT 705 0.16328024216428538 No Hit GTATCAACGCAGAGTACATGGGAGT 667 0.15447932131004025 No Hit CCATAGGGTCTTCTCGTCTTATTAT 667 0.15447932131004025 No Hit GTCCTTCAGTGTGCATTTCTCATTT 649 0.15031046406329251 No Hit GTATCAACGCAGAGTACATGGGTGG 625 0.14475198773429557 No Hit GTGTATATCAATGAGTTACAATGAA 615 0.14243595593054684 No Hit CTCTAATACTTGTAATGCTAGAGGT 591 0.1368774796015499 No Hit GTGTATATCAATGAGTTACAATGAG 569 0.13178220963330267 No Hit TTTCTAAATTTTCCACCTTTTTCAG 561 0.1299293841903037 No Hit CTGTAGGACATGGAATATGGCAAGA 560 0.12969778100992885 No Hit GTATCAACGCAGAGTACATGGGAAG 560 0.12969778100992885 No Hit GAATATGGCAAGAAAACTGAAAATC 560 0.12969778100992885 No Hit GAGTACATGGGGTGGTATCAACGCA 554 0.1283081619276796 No Hit GTACATGGGGAATAATTGCAATCCC 548 0.12691854284543033 No Hit GTTCTACAGTGTGGTTTTTATCATT 522 0.12089686015568366 No Hit CCATTGGGATGTCCTGATCCAACAT 508 0.11765441563043542 No Hit GGAATATGGCGAGAAAACTGAAAAT 479 0.11093792339956413 No Hit CTTCTACACCATTGGGATGTCCTGA 469 0.10862189159581538 No Hit GGGTAGGCACACGCTGAGCCAGTCA 468 0.10839028841544052 No Hit GGTATCAACGCAGAGTACATGGGAG 464 0.10746387569394104 No Hit GTATCAACGCAGAGTACATGGGGAA 457 0.10584265343131691 No Hit GATATATTTTGATCAACGGACCAAG 454 0.1051478438901923 No Hit CAACGCAGAGTACTTTTTTTTTTTT 439 0.1016737961845692 No Hit GATATACACTGTTCTACAATGCCGG 434 0.10051578028269484 No Hit GTCAGGATACCGCGGCCGTTAAACT 434 0.10051578028269484 No Hit GTTCTACAAATCCCGTTTCCAACGA 433 0.10028417710231997 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 2.316031803748729E-4 0.0 13 0.0 0.0 0.0 2.316031803748729E-4 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAACCA 25 0.006037072 18.993511 4 ATGTCGA 35 0.0021633422 16.289589 17 CGTCTTA 95 1.8189894E-11 16.003807 15 CGACCTG 75 5.8113073E-8 15.200092 10 CTAGGAC 70 4.43737E-7 14.921744 3 CGTTTGG 45 6.7361625E-4 14.781295 15 AATCGTA 65 3.3582874E-6 14.615474 13 TGTCCAC 185 0.0 14.378466 10 TAGGACC 445 0.0 14.298487 4 GGTTCGT 40 0.00525452 14.256697 18 TATGTCG 40 0.0052626124 14.25339 16 AGGGTAA 40 0.0052707153 14.250087 10 ACGAAAT 80 1.2809687E-7 14.250087 12 AATTCCG 40 0.0052828887 14.245133 5 CGAGACT 40 0.0052828887 14.245133 4 TAAGAGG 40 0.0052828887 14.245133 4 CTGTAGA 170 0.0 13.969055 1 TTAGAAA 150 0.0 13.926961 3 CTCGTCT 110 1.8371793E-10 13.818266 13 TCTCGTC 110 1.8371793E-10 13.818266 12 >>END_MODULE