##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064067_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1339632 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.290351380080498 32.0 32.0 32.0 32.0 32.0 2 31.41216990934824 32.0 32.0 32.0 32.0 32.0 3 31.498616037837255 32.0 32.0 32.0 32.0 32.0 4 31.573266389575643 32.0 32.0 32.0 32.0 32.0 5 31.522065761343413 32.0 32.0 32.0 32.0 32.0 6 35.1207846632508 36.0 36.0 36.0 36.0 36.0 7 35.139907078959 36.0 36.0 36.0 36.0 36.0 8 35.08525624947747 36.0 36.0 36.0 36.0 36.0 9 35.19175788574773 36.0 36.0 36.0 36.0 36.0 10 35.054142480920135 36.0 36.0 36.0 36.0 36.0 11 35.19682644188852 36.0 36.0 36.0 36.0 36.0 12 35.115964682838275 36.0 36.0 36.0 36.0 36.0 13 35.14883042507196 36.0 36.0 36.0 36.0 36.0 14 35.09740436179488 36.0 36.0 36.0 36.0 36.0 15 35.071842864309005 36.0 36.0 36.0 36.0 36.0 16 35.07664567582739 36.0 36.0 36.0 36.0 36.0 17 35.04538709138032 36.0 36.0 36.0 36.0 36.0 18 35.04198466444516 36.0 36.0 36.0 36.0 36.0 19 35.03798431210959 36.0 36.0 36.0 36.0 36.0 20 35.02187167819222 36.0 36.0 36.0 36.0 36.0 21 35.018576743463875 36.0 36.0 36.0 36.0 36.0 22 35.00691607844542 36.0 36.0 36.0 36.0 36.0 23 34.967538100015524 36.0 36.0 36.0 36.0 36.0 24 34.93909521420808 36.0 36.0 36.0 36.0 36.0 25 34.91534092944928 36.0 36.0 36.0 32.0 36.0 26 34.85966220574009 36.0 36.0 36.0 32.0 36.0 27 34.850493269793496 36.0 36.0 36.0 32.0 36.0 28 34.82537592413439 36.0 36.0 36.0 32.0 36.0 29 34.797271190894214 36.0 36.0 36.0 32.0 36.0 30 34.76864317961948 36.0 36.0 36.0 32.0 36.0 31 34.75023364625509 36.0 36.0 36.0 32.0 36.0 32 34.70983822422874 36.0 36.0 36.0 32.0 36.0 33 34.686361627670884 36.0 36.0 36.0 32.0 36.0 34 34.67013702270474 36.0 36.0 36.0 32.0 36.0 35 34.621849134687736 36.0 36.0 36.0 32.0 36.0 36 34.58895129408673 36.0 36.0 36.0 32.0 36.0 37 34.57305812342494 36.0 36.0 36.0 32.0 36.0 38 34.520053268360265 36.0 36.0 36.0 32.0 36.0 39 34.49380800100326 36.0 36.0 36.0 32.0 36.0 40 34.486930739188075 36.0 36.0 36.0 32.0 36.0 41 34.45683665364817 36.0 36.0 36.0 32.0 36.0 42 34.39090436776667 36.0 36.0 36.0 32.0 36.0 43 34.38335602613255 36.0 36.0 36.0 32.0 36.0 44 34.30321834653099 36.0 36.0 36.0 32.0 36.0 45 34.27129241463327 36.0 36.0 36.0 32.0 36.0 46 34.21487617494954 36.0 36.0 36.0 32.0 36.0 47 34.17199872800889 36.0 36.0 36.0 32.0 36.0 48 34.10943975658987 36.0 36.0 36.0 32.0 36.0 49 34.07968904893284 36.0 36.0 36.0 32.0 36.0 50 33.502964993371315 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 12.0 21 36.0 22 110.0 23 396.0 24 1011.0 25 2434.0 26 4994.0 27 9370.0 28 15342.0 29 23528.0 30 33819.0 31 47255.0 32 69435.0 33 111839.0 34 231464.0 35 788584.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.62362897422039 18.129343012509068 12.025908019959568 26.221119993310975 2 15.08117913155125 20.77693094361876 38.962922598030794 25.17896732679919 3 18.39816725240141 25.295529803796278 28.892199924158053 27.41410301964426 4 11.916630835931063 16.53088310819688 36.83466802823462 34.71781802763744 5 13.485569171235085 37.90548449126327 33.72978549332951 14.879160844172132 6 32.875146775711784 36.58916013314134 17.3919794211681 13.143713669978776 7 29.117570435440804 30.986368634347816 21.275485562815433 18.620575367395947 8 27.165072198932243 34.36264586095285 19.59941237593608 18.872869564178817 9 27.622264605875568 14.11084528017378 18.70231372446561 39.56457638948504 10 15.397087376466557 27.456728303686802 32.54355535947961 24.602628960367028 11 36.48419864559819 21.028685489746437 23.796161931037776 18.69095393361759 12 25.19695736882572 23.603606966102582 29.940729903032924 21.258705762038772 13 29.77621315847817 20.229721346975975 25.662667780412846 24.331397714133008 14 23.0900150862439 20.319699977083243 26.216398396274794 30.373886540398065 15 24.190295036735886 28.75596650248365 22.982661496817617 24.07107696396285 16 24.30607187112763 26.076573953807795 25.649064660127497 23.968289514937073 17 22.869414884087572 26.54661877291674 26.406878904057233 24.177087438938454 18 23.641751826997005 25.419033613759023 28.171584691295358 22.767629867948614 19 25.263449412562117 24.844005550782267 26.337252571790295 23.555292464865325 20 25.575664831576 24.901595595782403 26.258467854810114 23.264271717831484 21 26.05872358976196 24.388414131642122 25.362338313805584 24.19052396479033 22 25.250703552473446 25.33684674126438 25.8887155408583 23.52373416540388 23 23.807195494828367 25.27993096529155 26.39114492511287 24.521728614767216 24 24.467704719910007 25.347877723807372 26.562099934085932 23.622317622196693 25 24.243458008457655 25.195149352612507 26.752984999421475 23.808407639508367 26 23.399922362566812 26.129997909761414 27.115844008480394 23.354235719191376 27 24.00301596070293 25.771533511503947 26.33978828553085 23.885662242262267 28 23.41359303894987 25.759573235550565 26.60424853385569 24.222585191643873 29 23.758655594671826 25.40922785675681 26.206856395510286 24.62526015306107 30 23.499424449046195 25.760421503359993 26.647262661747735 24.092891385846073 31 24.427096825246338 25.333081505027483 25.94179929333792 24.29802237638826 32 23.77467282680181 25.99880111766291 25.862340537824885 24.36418551771039 33 23.436379068758786 25.74085506734639 26.706166992767066 24.11659887112776 34 24.229039373840603 25.689406126478527 26.624464856915708 23.457089642765165 35 24.380852563183794 25.858176866848215 26.37259029668912 23.38838027327887 36 23.579631348033526 26.203165440987092 26.307306523412333 23.90989668756705 37 24.198928022215917 26.045924842114694 25.707535197599245 24.04761193807014 38 23.961870037416276 26.36906841534754 25.82708484506437 23.841976702171817 39 24.53167947422091 25.52498032956746 25.81604301068847 24.127297185523158 40 25.05718124813377 25.86548223350254 26.01216781128695 23.06516870707674 41 24.129431226410585 25.711190936887867 26.666487506569204 23.49289033013234 42 24.707899624367727 26.760216421520326 25.76529850523437 22.76658544887758 43 23.729148844368602 26.125809374939347 26.28742309351798 23.857618687174067 44 23.518043257236787 26.46672847551608 25.69359531924868 24.321632947998452 45 23.672626321364508 26.631154081869546 25.698052953862256 23.99816664290369 46 23.917457435817813 25.802986509647486 25.54545155954208 24.734104494992625 47 24.60572156294533 25.866098735517124 25.59243475099638 23.935744950541167 48 24.42005076142132 26.29501343684682 25.042102120035832 24.24283368169603 49 24.42782623235704 26.22578805459426 25.266641186956377 24.079744526092316 50 24.075012708894285 26.930762839715648 24.882783311299605 24.11144114009046 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 28.0 1 27.0 2 26.0 3 75.0 4 124.0 5 173.0 6 222.0 7 235.0 8 248.0 9 356.5 10 465.0 11 767.5 12 1070.0 13 1934.5 14 2799.0 15 3877.0 16 4955.0 17 5526.5 18 6098.0 19 6010.5 20 5923.0 21 6285.0 22 6647.0 23 7439.5 24 8232.0 25 8945.0 26 9658.0 27 12538.0 28 15418.0 29 18822.0 30 22226.0 31 26230.0 32 30234.0 33 36320.5 34 42407.0 35 49028.0 36 55649.0 37 59884.5 38 64120.0 39 65791.0 40 67462.0 41 69784.5 42 72107.0 43 72999.0 44 73891.0 45 79376.5 46 84862.0 47 88884.0 48 92906.0 49 95072.5 50 97239.0 51 94763.5 52 92288.0 53 90806.5 54 89325.0 55 88332.0 56 87339.0 57 84193.0 58 81047.0 59 73086.0 60 65125.0 61 57345.5 62 49566.0 63 42678.5 64 35791.0 65 29956.5 66 24122.0 67 20431.0 68 16740.0 69 14800.0 70 12860.0 71 9981.5 72 7103.0 73 6114.0 74 5125.0 75 4022.5 76 2920.0 77 2519.0 78 2118.0 79 1711.5 80 1305.0 81 1044.0 82 783.0 83 640.5 84 498.0 85 379.0 86 260.0 87 186.5 88 113.0 89 88.5 90 64.0 91 50.0 92 36.0 93 31.0 94 26.0 95 32.0 96 38.0 97 25.0 98 12.0 99 12.0 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00925627336462551 2 1.492947316875082E-4 3 2.985894633750164E-4 4 0.0 5 0.0 6 2.239420975312623E-4 7 7.46473658437541E-5 8 0.0 9 0.0012690052193438197 10 0.0011197104876563115 11 0.0 12 1.492947316875082E-4 13 6.718262925937869E-4 14 7.46473658437541E-5 15 0.0052253156090627875 16 8.957683901250491E-4 17 0.0 18 1.492947316875082E-4 19 7.46473658437541E-5 20 5.225315609062787E-4 21 0.0 22 1.492947316875082E-4 23 0.0011943578535000656 24 6.718262925937869E-4 25 0.0012690052193438197 26 0.005374610340750295 27 0.006867557657625377 28 0.004777431414000262 29 0.0026873051703751477 30 0.0034337788288126884 31 0.00709149975515664 32 0.003807015658031459 33 0.004852078779844017 34 0.002761952536218902 35 0.0035830735605001966 36 0.007688678681906673 37 0.003881663023875213 38 0.008061915511125443 39 0.004329547218937738 40 0.002388715707000131 41 0.0035830735605001966 42 0.0017915367802500983 43 0.0013436525851875738 44 0.0013436525851875738 45 9.704157559688033E-4 46 5.971789267500328E-4 47 0.0024633630728438855 48 0.002388715707000131 49 2.985894633750164E-4 50 0.001418299951031328 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1339632.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.81760052927738 #Duplication Level Percentage of deduplicated Percentage of total 1 75.32049917936031 42.79530034038658 2 14.487784315917832 16.463222836322988 3 4.762499189246578 8.117813293668585 4 2.056264227658012 4.67327997878864 5 0.9904443214829256 2.813733490225402 6 0.602979755588534 2.0555917728162383 7 0.38086743113490995 1.5147981489784765 8 0.23993722531847886 1.090612593619884 9 0.1792359150167072 0.9165379157926898 >10 0.8546878582801151 8.564520150787446 >50 0.06041990382845913 2.399550232360553 >100 0.058563980169984 6.287011912273052 >500 0.005552301679133359 2.115140904870636 >1k 2.6439531805396945E-4 0.19288642910894152 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.46473658437541E-5 2 0.0 0.0 0.0 7.46473658437541E-5 7.46473658437541E-5 3 0.0 0.0 0.0 7.46473658437541E-5 7.46473658437541E-5 4 0.0 0.0 0.0 7.46473658437541E-5 7.46473658437541E-5 5 0.0 0.0 0.0 7.46473658437541E-5 7.46473658437541E-5 6 0.0 0.0 0.0 7.46473658437541E-5 2.2394209753126231E-4 7 0.0 0.0 0.0 7.46473658437541E-5 2.2394209753126231E-4 8 0.0 0.0 0.0 7.46473658437541E-5 2.2394209753126231E-4 9 0.0 0.0 0.0 7.46473658437541E-5 2.2394209753126231E-4 10 0.0 0.0 0.0 7.46473658437541E-5 2.2394209753126231E-4 11 0.0 0.0 0.0 7.46473658437541E-5 2.2394209753126231E-4 12 0.0 0.0 0.0 7.46473658437541E-5 3.732368292187705E-4 13 0.0 0.0 0.0 7.46473658437541E-5 5.971789267500328E-4 14 0.0 0.0 0.0 7.46473658437541E-5 5.971789267500328E-4 15 0.0 0.0 0.0 7.46473658437541E-5 8.211210242812951E-4 16 0.0 0.0 0.0 7.46473658437541E-5 8.211210242812951E-4 17 0.0 0.0 0.0 7.46473658437541E-5 8.211210242812951E-4 18 0.0 0.0 0.0 1.492947316875082E-4 8.957683901250493E-4 19 0.0 0.0 0.0 1.492947316875082E-4 8.957683901250493E-4 20 0.0 0.0 0.0 1.492947316875082E-4 0.0011197104876563115 21 0.0 0.0 0.0 1.492947316875082E-4 0.0012690052193438197 22 0.0 0.0 0.0 2.2394209753126231E-4 0.0013436525851875738 23 0.0 0.0 0.0 2.985894633750164E-4 0.0013436525851875738 24 0.0 0.0 0.0 5.225315609062787E-4 0.0013436525851875738 25 0.0 0.0 0.0 5.971789267500328E-4 0.0013436525851875738 26 0.0 0.0 0.0 9.704157559688034E-4 0.001418299951031328 27 0.0 0.0 0.0 0.0011197104876563115 0.001418299951031328 28 0.0 0.0 0.0 0.0017915367802500985 0.001418299951031328 29 0.0 0.0 0.0 0.0029112472679064102 0.001418299951031328 30 0.0 0.0 0.0 0.004777431414000262 0.001418299951031328 31 0.0 0.0 0.0 0.010450631218125575 0.001418299951031328 32 0.0 0.0 0.0 0.01687030468068843 0.001492947316875082 33 0.0 0.0 0.0 0.023513920240782544 0.001492947316875082 34 0.0 0.0 0.0 0.031351893654376725 0.001492947316875082 35 0.0 0.0 0.0 0.04053351965315848 0.001492947316875082 36 0.0 0.0 0.0 0.05389539813919046 0.001492947316875082 37 0.0 0.0 0.0 0.07830508677009805 0.001492947316875082 38 0.0 0.0 0.0 0.1118964013997874 0.001492947316875082 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGAAC 50 0.0025804162 22.000242 28 TTACGGT 50 0.0025804162 22.000242 21 GTATTAC 180 0.0 21.999422 1 TAGGACG 995 0.0 20.560738 4 TTAGGAC 660 0.0 20.331282 3 TGTAGGA 1205 0.0 19.350744 2 AGGACGT 1035 0.0 19.128504 5 CTGTAGG 1235 0.0 18.882095 1 GCGAGAA 770 0.0 18.856646 20 GGACGTG 1030 0.0 18.367077 6 CCGATTA 60 0.0074120387 18.333534 9 TCGAACT 120 3.1647141E-7 18.332167 19 GTAGGAC 1200 0.0 18.148167 3 CGTCTTA 170 1.2732926E-10 18.118525 15 TACGGAA 85 1.430858E-4 18.117847 37 GTATTAT 135 5.5284545E-8 17.925455 1 ACGGAAA 765 0.0 17.830261 38 TATGGCG 1420 0.0 17.660849 16 GATATAC 500 0.0 17.599537 1 GTCCTAT 440 0.0 17.499538 1 >>END_MODULE