##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064066_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3119390 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.27520829392926 32.0 32.0 32.0 32.0 32.0 2 31.425664953724926 32.0 32.0 32.0 32.0 32.0 3 31.499991665037076 32.0 32.0 32.0 32.0 32.0 4 31.586163961543765 32.0 32.0 32.0 32.0 32.0 5 31.53651867833134 32.0 32.0 32.0 32.0 32.0 6 35.13137985311231 36.0 36.0 36.0 36.0 36.0 7 35.14468117163933 36.0 36.0 36.0 36.0 36.0 8 35.09736679286655 36.0 36.0 36.0 36.0 36.0 9 35.195535665626934 36.0 36.0 36.0 36.0 36.0 10 35.06484504983346 36.0 36.0 36.0 36.0 36.0 11 35.2036667425362 36.0 36.0 36.0 36.0 36.0 12 35.11204594488025 36.0 36.0 36.0 36.0 36.0 13 35.14451351065433 36.0 36.0 36.0 36.0 36.0 14 35.092944774459106 36.0 36.0 36.0 36.0 36.0 15 35.067357079428994 36.0 36.0 36.0 36.0 36.0 16 35.08180317305627 36.0 36.0 36.0 36.0 36.0 17 35.04106283600319 36.0 36.0 36.0 36.0 36.0 18 35.03896691340294 36.0 36.0 36.0 36.0 36.0 19 35.03944553262016 36.0 36.0 36.0 36.0 36.0 20 35.03091790382094 36.0 36.0 36.0 36.0 36.0 21 35.02353761472595 36.0 36.0 36.0 36.0 36.0 22 35.00875010819423 36.0 36.0 36.0 36.0 36.0 23 34.95730222896143 36.0 36.0 36.0 36.0 36.0 24 34.931694337675 36.0 36.0 36.0 36.0 36.0 25 34.90526737599338 36.0 36.0 36.0 32.0 36.0 26 34.84469944444266 36.0 36.0 36.0 32.0 36.0 27 34.84327737153738 36.0 36.0 36.0 32.0 36.0 28 34.81292688634637 36.0 36.0 36.0 32.0 36.0 29 34.785029124283916 36.0 36.0 36.0 32.0 36.0 30 34.76620012245984 36.0 36.0 36.0 32.0 36.0 31 34.75517713399094 36.0 36.0 36.0 32.0 36.0 32 34.71084474849249 36.0 36.0 36.0 32.0 36.0 33 34.68749851733833 36.0 36.0 36.0 32.0 36.0 34 34.67600171828467 36.0 36.0 36.0 32.0 36.0 35 34.6287421579219 36.0 36.0 36.0 32.0 36.0 36 34.60928771330292 36.0 36.0 36.0 32.0 36.0 37 34.58845062656481 36.0 36.0 36.0 32.0 36.0 38 34.544464462603266 36.0 36.0 36.0 32.0 36.0 39 34.53543032451858 36.0 36.0 36.0 32.0 36.0 40 34.516791103388805 36.0 36.0 36.0 32.0 36.0 41 34.49425913399735 36.0 36.0 36.0 32.0 36.0 42 34.42897778091229 36.0 36.0 36.0 32.0 36.0 43 34.427412731335295 36.0 36.0 36.0 32.0 36.0 44 34.350825321617364 36.0 36.0 36.0 32.0 36.0 45 34.31180807786138 36.0 36.0 36.0 32.0 36.0 46 34.27363811514431 36.0 36.0 36.0 32.0 36.0 47 34.24102500809453 36.0 36.0 36.0 32.0 36.0 48 34.19204459846316 36.0 36.0 36.0 32.0 36.0 49 34.167870000224404 36.0 36.0 36.0 32.0 36.0 50 33.57307486399584 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 4.0 19 18.0 20 29.0 21 110.0 22 400.0 23 1114.0 24 2774.0 25 6246.0 26 12492.0 27 22344.0 28 36746.0 29 54671.0 30 77610.0 31 108132.0 32 155466.0 33 248600.0 34 519109.0 35 1873523.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.72505693942876 17.92354471027577 11.845549234652003 26.505849115643464 2 15.571124938689543 20.644200591786163 37.82549040351096 25.95918406601333 3 18.04314834559967 24.923013498203808 29.03165310520238 28.00218505099414 4 11.992601117526183 16.370380106366948 36.55756413914259 35.07945463696428 5 13.844341361612367 37.37673070696515 33.6652999464639 15.113627984958597 6 33.385533760318935 36.41212199704621 17.116984843496493 13.085359399138358 7 29.64509086712466 30.889693177191695 21.133907590907196 18.331308364776447 8 27.71446587777286 33.54365229857514 19.462208785117856 19.27967303853415 9 27.69201966552199 13.8760800264669 18.38077456715591 40.0511257408552 10 15.411457667131184 27.087310510069212 32.23195391620271 25.269277906596898 11 37.10363606695803 20.78001222676122 23.281593466921546 18.834758239359207 12 25.085473524125092 23.553922613641717 29.408406202885374 21.952197659347814 13 29.736142995128194 19.707448181192476 25.345204927006304 25.211203896673023 14 23.405903216788957 19.98455464283974 25.636920622789628 30.97262151758168 15 24.7422353209343 27.955120845877868 22.538736434513616 24.76390739867422 16 25.17110041877086 25.70457403697609 24.594316731567655 24.530008812685395 17 23.51914957732121 26.14453466863714 25.693356713972925 24.64295904006873 18 24.362614950506288 25.046820111393714 27.1235108447624 23.467054093337598 19 25.456123270373315 24.70039786663213 25.741083103827773 24.102395759166782 20 25.805997632850797 24.5028473752983 25.413738185091578 24.277416806759327 21 26.625301741686673 24.1743097208108 24.79090463199536 24.409483905507166 22 25.64083904946709 24.732904253303616 25.309684242448917 24.316572454780378 23 24.186349345876902 24.482082422491487 25.92372106263867 25.40784716899294 24 24.832458317745264 24.99947906197816 25.752450893176288 24.415611727100288 25 24.793041089794983 24.667565788777686 25.934917621970556 24.604475499456775 26 24.197188661546164 25.59147685996462 26.249396484897215 23.961937993592 27 24.742976991359257 25.106630725550595 25.50054886290482 24.64984342018533 28 24.074003425811437 25.196128185490092 25.93114202370369 24.798726364994785 29 24.281779344508042 24.930705740315315 25.739283032828457 25.048231882348187 30 24.09041990286827 25.300126407821832 26.08264949255739 24.526804196752508 31 24.926310524915284 24.909318825200295 25.189072734092722 24.9752979157917 32 24.512092964655775 25.30554199300931 25.046573053573358 25.135791988761557 33 24.075757760339158 24.92454936398336 25.943926408139372 25.055766467538117 34 24.83157295075214 24.96798162922935 25.921880625255067 24.278564794763447 35 25.1965989739986 24.947311795553738 25.90695202183571 23.949137208611948 36 24.14991383801547 25.505165711537693 25.629399270628785 24.715521179818058 37 25.047454998299283 25.248976443534403 25.128082811656956 24.575485746509358 38 24.437074202907844 25.304714425404356 25.579244345414615 24.67896702627318 39 25.163067836091578 24.789965805926673 25.141844812894366 24.905121545087383 40 25.457641126518006 25.060790668195636 25.622100521557485 23.859467683728873 41 24.35357989545715 25.204284942591194 26.31508081152953 24.12705435042213 42 25.401946062672554 25.722945099643386 25.463658151573863 23.411450686110197 43 24.389295455332334 24.961209842569666 25.95439816269297 24.69509653940503 44 24.147401410423853 25.51143733333846 25.214131423702273 25.127029832535406 45 24.302354209918224 25.685848452945937 25.381906731791386 24.62989060534445 46 24.223205046169785 25.16881689682101 25.381264594358576 25.226713462650626 47 24.723650857410863 25.088568613867128 25.7050465596331 24.482733969088905 48 24.993604363010586 25.51089758838001 24.850015099473794 24.645482949135612 49 24.461350258096655 25.626648167228428 25.12061714946653 24.791384425208392 50 24.409644448248656 26.083807871450098 24.802546941685588 24.704000738615655 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 212.0 1 148.5 2 85.0 3 306.0 4 527.0 5 592.5 6 658.0 7 629.0 8 600.0 9 827.5 10 1055.0 11 1608.0 12 2161.0 13 3916.0 14 5671.0 15 7488.0 16 9305.0 17 10180.0 18 11055.0 19 11109.0 20 11163.0 21 12208.0 22 13253.0 23 15030.0 24 16807.0 25 18974.0 26 21141.0 27 27217.0 28 33293.0 29 40040.5 30 46788.0 31 53061.0 32 59334.0 33 70033.0 34 80732.0 35 93320.5 36 105909.0 37 118554.5 38 131200.0 39 136862.5 40 142525.0 41 151896.5 42 161268.0 43 163962.0 44 166656.0 45 179790.0 46 192924.0 47 205977.5 48 219031.0 49 226220.0 50 233409.0 51 227053.0 52 220697.0 53 218531.0 54 216365.0 55 216197.5 56 216030.0 57 210191.5 58 204353.0 59 185767.5 60 167182.0 61 147411.0 62 127640.0 63 109898.5 64 92157.0 65 78807.5 66 65458.0 67 56147.0 68 46836.0 69 42184.5 70 37533.0 71 29072.5 72 20612.0 73 17492.0 74 14372.0 75 11109.5 76 7847.0 77 6961.0 78 6075.0 79 5040.5 80 4006.0 81 3215.5 82 2425.0 83 1995.5 84 1566.0 85 1113.5 86 661.0 87 483.0 88 305.0 89 242.5 90 180.0 91 141.0 92 102.0 93 84.5 94 67.0 95 77.5 96 88.0 97 61.5 98 35.0 99 35.5 100 36.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009168459217988133 2 6.411509942649043E-4 3 3.8469059655894263E-4 4 0.0 5 0.0 6 9.617264913973566E-5 7 0.0 8 3.205754971324522E-5 9 7.052660936913948E-4 10 9.296689416841114E-4 11 9.617264913973566E-5 12 9.617264913973566E-5 13 3.526330468456974E-4 14 1.9234529827947132E-4 15 0.005417725901538442 16 7.3732364340464E-4 17 0.0 18 1.2823019885298089E-4 19 9.617264913973566E-5 20 8.334962925443756E-4 21 0.0 22 9.617264913973566E-5 23 7.3732364340464E-4 24 5.449783451251687E-4 25 0.001634935035375506 26 0.005257438152972216 27 0.006860315638634477 28 0.004135423913008633 29 0.0026928341759125986 30 0.0038789635153026717 31 0.007052660936913948 32 0.003109582322184786 33 0.004231596562148369 34 0.002789006825052334 35 0.003077524772471541 36 0.008495250674009983 37 0.003814848415876181 38 0.007693811931178852 39 0.004359826761001349 40 0.002532546427346372 41 0.0030454672227582954 42 0.0021157982810741847 43 0.0013464170879562993 44 0.0014105321873827896 45 0.0013464170879562993 46 0.0010899566902503374 47 0.0018272803336549775 48 0.0024363737782066366 49 5.129207954119235E-4 50 0.001314359538243054 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3119390.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.15938518993321 #Duplication Level Percentage of deduplicated Percentage of total 1 69.66240386342305 32.15573733188436 2 15.50384688716214 14.312960807805283 3 6.171424470898512 8.546074779683524 4 3.02481636781476 5.584946554031048 5 1.6468000006597945 3.800763778061886 6 0.9751595614708843 2.7007659491748544 7 0.6696394521620144 2.1637101787505593 8 0.4524435872195621 1.670761425534633 9 0.3212809010266394 1.334711597819171 >10 1.4127476478817025 11.177762932754625 >50 0.07760567299799749 2.4701730465031364 >100 0.06539351521315084 6.442322165198891 >500 0.010562335670842226 3.295973376668173 >1k 0.005875736399138593 4.343336076129882 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 3171 0.10165449014070058 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.2057549713245215E-5 2 0.0 0.0 0.0 0.0 3.2057549713245215E-5 3 0.0 0.0 0.0 3.2057549713245215E-5 3.2057549713245215E-5 4 0.0 0.0 0.0 3.2057549713245215E-5 3.2057549713245215E-5 5 0.0 0.0 0.0 3.2057549713245215E-5 3.2057549713245215E-5 6 0.0 0.0 0.0 3.2057549713245215E-5 6.411509942649043E-5 7 0.0 0.0 0.0 3.2057549713245215E-5 6.411509942649043E-5 8 0.0 0.0 0.0 3.2057549713245215E-5 6.411509942649043E-5 9 0.0 0.0 0.0 1.9234529827947132E-4 6.411509942649043E-5 10 0.0 0.0 0.0 1.9234529827947132E-4 6.411509942649043E-5 11 0.0 0.0 0.0 1.9234529827947132E-4 6.411509942649043E-5 12 0.0 0.0 0.0 1.9234529827947132E-4 3.526330468456974E-4 13 0.0 0.0 0.0 1.9234529827947132E-4 4.4880569598543306E-4 14 0.0 0.0 0.0 2.2440284799271653E-4 4.4880569598543306E-4 15 0.0 0.0 0.0 2.2440284799271653E-4 5.449783451251687E-4 16 0.0 0.0 0.0 2.564603977059617E-4 5.449783451251687E-4 17 0.0 0.0 0.0 2.8851794741920696E-4 5.770358948384139E-4 18 0.0 0.0 0.0 3.526330468456974E-4 5.770358948384139E-4 19 0.0 0.0 0.0 4.167481462721878E-4 6.411509942649044E-4 20 0.0 0.0 0.0 4.8086324569867825E-4 6.732085439781495E-4 21 0.0 0.0 0.0 6.411509942649044E-4 7.3732364340464E-4 22 0.0 0.0 0.0 8.655538422576209E-4 7.693811931178853E-4 23 0.0 0.0 0.0 0.001634935035375506 7.693811931178853E-4 24 0.0 0.0 0.0 0.002660776626199353 7.693811931178853E-4 25 0.0 0.0 0.0 0.0031095823221847863 7.693811931178853E-4 26 0.0 0.0 0.0 0.0037827908661629355 7.693811931178853E-4 27 0.0 0.0 0.0 0.004872747556413273 7.693811931178853E-4 28 0.0 0.0 0.0 0.007982329878598059 8.014387428311304E-4 29 0.0 0.0 0.0 0.012983307633864313 8.334962925443756E-4 30 0.0 0.0 0.0 0.024972831226618024 8.334962925443756E-4 31 0.0 0.0 0.0 0.053119359874847324 8.655538422576209E-4 32 0.0 0.0 0.0 0.08206732726590776 8.655538422576209E-4 33 0.0 0.0 0.0 0.11181673339979932 8.655538422576209E-4 34 3.2057549713245215E-5 0.0 0.0 0.14435514635874322 9.617264913973565E-4 35 3.2057549713245215E-5 0.0 0.0 0.17881701230048183 9.617264913973565E-4 36 3.2057549713245215E-5 0.0 0.0 0.23158373912848346 9.617264913973565E-4 37 3.2057549713245215E-5 0.0 0.0 0.3127213974527071 9.617264913973565E-4 38 3.2057549713245215E-5 0.0 0.0 0.4223261599222925 9.617264913973565E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACG 1605 0.0 20.696432 4 ACGATTA 175 0.0 20.114227 40 TTAGGAC 1155 0.0 19.99834 3 ATACCGT 730 0.0 19.587727 6 GTATCAA 6520 0.0 19.435215 1 TACCGTC 730 0.0 18.683678 7 GTCCTAC 1495 0.0 18.541454 1 ACGACTA 60 0.00741753 18.332106 5 TGGCGAG 1910 0.0 18.312614 18 GATATAC 1065 0.0 18.17806 1 TATGGCG 1900 0.0 18.177439 16 ACCGTCG 745 0.0 18.012217 8 AGGACGT 1785 0.0 17.746708 5 CCGTCGT 750 0.0 17.600231 9 GTAGGAC 1815 0.0 17.453096 3 GACGTGA 1010 0.0 17.206766 7 ATTTCGT 820 0.0 17.170132 42 GGACGTG 1795 0.0 16.789959 6 TAATACC 355 0.0 16.731274 4 CGTCGTA 780 0.0 16.641245 10 >>END_MODULE