##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064065_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1682914 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.339403558351762 32.0 32.0 32.0 32.0 32.0 2 31.44412608130897 32.0 32.0 32.0 32.0 32.0 3 31.502803470646747 32.0 32.0 32.0 32.0 32.0 4 31.577599330684752 32.0 32.0 32.0 32.0 32.0 5 31.53319955743431 32.0 32.0 32.0 32.0 32.0 6 35.117090356369964 36.0 36.0 36.0 36.0 36.0 7 35.13396287629671 36.0 36.0 36.0 36.0 36.0 8 35.08902475111622 36.0 36.0 36.0 36.0 36.0 9 35.181192859528174 36.0 36.0 36.0 36.0 36.0 10 35.05073758968076 36.0 36.0 36.0 36.0 36.0 11 35.187748155877244 36.0 36.0 36.0 36.0 36.0 12 35.095647787112114 36.0 36.0 36.0 36.0 36.0 13 35.141900893331446 36.0 36.0 36.0 36.0 36.0 14 35.07991555124029 36.0 36.0 36.0 36.0 36.0 15 35.06205189332313 36.0 36.0 36.0 36.0 36.0 16 35.06951810965979 36.0 36.0 36.0 36.0 36.0 17 35.03485858457414 36.0 36.0 36.0 36.0 36.0 18 35.02990289462207 36.0 36.0 36.0 36.0 36.0 19 35.02677498671947 36.0 36.0 36.0 36.0 36.0 20 35.01762894598298 36.0 36.0 36.0 36.0 36.0 21 35.02052570719597 36.0 36.0 36.0 36.0 36.0 22 35.005167822003976 36.0 36.0 36.0 36.0 36.0 23 34.95021967848624 36.0 36.0 36.0 36.0 36.0 24 34.93323901280755 36.0 36.0 36.0 36.0 36.0 25 34.90494166665676 36.0 36.0 36.0 32.0 36.0 26 34.85199837900213 36.0 36.0 36.0 32.0 36.0 27 34.852329352539705 36.0 36.0 36.0 32.0 36.0 28 34.825916238144075 36.0 36.0 36.0 32.0 36.0 29 34.8067738458412 36.0 36.0 36.0 32.0 36.0 30 34.788867404989205 36.0 36.0 36.0 32.0 36.0 31 34.780181280802225 36.0 36.0 36.0 32.0 36.0 32 34.749659816247295 36.0 36.0 36.0 32.0 36.0 33 34.722883046905544 36.0 36.0 36.0 32.0 36.0 34 34.71513636466272 36.0 36.0 36.0 32.0 36.0 35 34.66965632230762 36.0 36.0 36.0 32.0 36.0 36 34.65028516014485 36.0 36.0 36.0 32.0 36.0 37 34.641932386325145 36.0 36.0 36.0 32.0 36.0 38 34.60174376111911 36.0 36.0 36.0 32.0 36.0 39 34.59959391864349 36.0 36.0 36.0 32.0 36.0 40 34.57843656895123 36.0 36.0 36.0 32.0 36.0 41 34.549278216236836 36.0 36.0 36.0 32.0 36.0 42 34.48569683299325 36.0 36.0 36.0 32.0 36.0 43 34.46691512459935 36.0 36.0 36.0 32.0 36.0 44 34.41981705541697 36.0 36.0 36.0 32.0 36.0 45 34.37689626445558 36.0 36.0 36.0 32.0 36.0 46 34.34322431211577 36.0 36.0 36.0 32.0 36.0 47 34.30727951636269 36.0 36.0 36.0 32.0 36.0 48 34.25654252088936 36.0 36.0 36.0 32.0 36.0 49 34.23539289589367 36.0 36.0 36.0 32.0 36.0 50 33.651895462275554 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 2.0 17 1.0 18 2.0 19 4.0 20 21.0 21 52.0 22 132.0 23 488.0 24 1241.0 25 2813.0 26 5977.0 27 10974.0 28 18743.0 29 28547.0 30 41302.0 31 58833.0 32 84545.0 33 134922.0 34 282176.0 35 1012139.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.87857156864668 18.044128457322426 12.021673800741516 26.055626173289383 2 16.071248186173204 20.422946973865443 37.0038492940188 26.50195554594255 3 18.133373898038396 24.095315964984422 28.986195323808552 28.785114813168633 4 12.303837272730513 16.0018872027923 36.00605853893901 35.688216985538176 5 14.082597209364234 36.93236849892508 33.397012562733444 15.588021728977239 6 33.99811516731752 35.967444447349465 16.65807043522284 13.376369950110167 7 30.32894134816158 30.929150271493373 20.371332106096926 18.370576274248123 8 28.387309155429215 32.77701653203907 19.00400139282221 19.831672919709504 9 27.59857887409226 14.083146204953263 18.490918306652066 39.82735661430241 10 15.94295561233585 26.83403648463961 31.353734624754885 25.869273278269656 11 36.98551262008197 21.4191702126016 22.308699261340305 19.286617905976126 12 24.809452193253236 24.0102417774915 28.56015558755038 22.62015044170488 13 29.191707677077627 19.782031795002215 25.447291767929997 25.57896875999016 14 23.68866710321313 19.587962726379253 25.48187480465338 31.241495365754236 15 25.15914994054718 27.285130496117592 22.391994043427594 25.163725519907633 16 25.603573368257297 26.173425064204874 23.626621759896942 24.596379807640886 17 23.90751993268818 26.055817468985342 25.18821520291589 24.84844739541058 18 24.548846937744738 25.21501446898527 26.229923168796905 24.006215424473083 19 25.409438628474184 24.914523261438195 25.916416406304776 23.759621703782845 20 25.97149092966142 24.12515754027416 25.221715095878967 24.681636434185453 21 26.909396439746775 24.13480427401519 24.94221332759725 24.01358595864079 22 26.09130715610373 24.14735639929099 25.29441510048351 24.46692134412177 23 24.547552113879544 24.252288161929904 25.714227990832494 25.485931733358054 24 24.59904201479939 24.919558834801922 25.649486275831045 24.83191287456764 25 24.835134797877462 24.443962469323605 25.783087426985723 24.937815305813213 26 24.630815572092505 25.208829644806872 25.915436547104253 24.244918235996366 27 25.105834757536787 24.863324007672873 25.359695557198307 24.67114567759203 28 24.704963739954504 24.551235884015394 25.9180292409754 24.825771135054705 29 24.403760220574252 24.841521677124927 25.978085187297967 24.776632915002853 30 24.623142452390688 24.876401182745607 25.944283079321917 24.556173285541792 31 24.943887529036754 24.927723809574744 25.20743935188239 24.92094930950611 32 24.85031505739012 24.94158781318559 25.090143730821428 25.11795339860286 33 24.567606465728808 24.614491437698845 25.479991585662827 25.337910510909524 34 25.06472585177557 24.79696850672097 25.626980622948814 24.511325018554643 35 25.35099536086548 24.693363726091995 25.674849378170578 24.28079153487195 36 24.598033383864525 25.057686970856118 25.38072212261906 24.9635575226603 37 25.52235417996247 24.896990959448846 25.081082108931096 24.499572751657592 38 24.82325388746367 24.75889613681162 25.452331586819675 24.965518388905032 39 25.255755083607667 24.940517927813367 24.930950881237894 24.872776107341075 40 25.22589385989411 25.02908721410448 25.369992928746726 24.37502599725469 41 24.429230934699895 25.354262770365466 25.774796611247158 24.44170968368748 42 25.498665392669285 25.17624422719937 25.25087765584482 24.074212724286525 43 25.010933559610482 24.52670759620938 25.384397810435843 25.077961033744295 44 24.67548441879549 24.977404980589974 25.17807133311506 25.16903926749948 45 24.87843835399916 25.33063638702685 25.06020889053421 24.730716368439786 46 24.82854022397026 25.06224367194287 24.96681327849156 25.142402825595312 47 24.924831241680927 24.89262454839323 25.366514546491732 24.816029663434115 48 25.560242606901117 25.403309907319983 24.43158690987571 24.604860575903196 49 24.96516448601796 25.36429480144203 24.743405614920356 24.927135097619658 50 24.868857017902474 25.57383225107196 24.763443492646008 24.793867238379555 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 10.0 1 21.5 2 33.0 3 87.5 4 142.0 5 184.0 6 226.0 7 222.0 8 218.0 9 309.5 10 401.0 11 629.5 12 858.0 13 1704.5 14 2551.0 15 3500.0 16 4449.0 17 4785.0 18 5121.0 19 5182.0 20 5243.0 21 5751.5 22 6260.0 23 7156.5 24 8053.0 25 9127.5 26 10202.0 27 12470.5 28 14739.0 29 17432.0 30 20125.0 31 22760.5 32 25396.0 33 29681.0 34 33966.0 35 39746.5 36 45527.0 37 53547.0 38 61567.0 39 68037.5 40 74508.0 41 82225.5 42 89943.0 43 92917.0 44 95891.0 45 105244.0 46 114597.0 47 121089.5 48 127582.0 49 130788.0 50 133994.0 51 131158.5 52 128323.0 53 125950.5 54 123578.0 55 121554.5 56 119531.0 57 115014.0 58 110497.0 59 100403.5 60 90310.0 61 79546.0 62 68782.0 63 59928.5 64 51075.0 65 42942.0 66 34809.0 67 30276.5 68 25744.0 69 22863.0 70 19982.0 71 15279.5 72 10577.0 73 8914.0 74 7251.0 75 5614.5 76 3978.0 77 3336.5 78 2695.0 79 2270.5 80 1846.0 81 1439.5 82 1033.0 83 851.5 84 670.0 85 474.5 86 279.0 87 202.0 88 125.0 89 92.0 90 59.0 91 57.0 92 55.0 93 44.5 94 34.0 95 35.5 96 37.0 97 34.5 98 32.0 99 21.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00861600771043559 2 4.753659426447222E-4 3 3.565244569835416E-4 4 0.0 5 0.0 6 3.565244569835416E-4 7 0.0 8 0.0 9 0.0013666770851035763 10 8.318903996282638E-4 11 5.9420742830590276E-5 12 1.782622284917708E-4 13 4.753659426447222E-4 14 4.753659426447222E-4 15 0.0039811897696495485 16 0.0011884148566118054 17 0.0 18 2.376829713223611E-4 19 0.0 20 6.536281711364931E-4 21 0.0 22 5.9420742830590276E-5 23 7.724696567976737E-4 24 4.159451998141319E-4 25 0.0014260978279341664 26 0.0049319216549389925 27 0.006060915768720207 28 0.004159451998141319 29 0.0020203052562400695 30 0.002971037141529514 31 0.007902958796468507 32 0.0027333541702071525 33 0.0042782934838025 34 0.002792774913037743 35 0.003386982341343646 36 0.007427592853823784 37 0.0030898786271906947 38 0.007902958796468507 39 0.0032087201128518745 40 0.0026145126845459723 41 0.0031492993700212844 42 0.0013072563422729861 43 0.0013072563422729861 44 0.0012478355994423958 45 0.0013666770851035763 46 7.130489139670832E-4 47 0.0020203052562400695 48 0.0016043600564259373 49 2.9710371415295135E-4 50 0.001069573370950625 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1682914.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.19677865317719 #Duplication Level Percentage of deduplicated Percentage of total 1 68.05352664242405 30.75800180225737 2 15.775527310705753 14.260060319982394 3 6.543933482103813 8.872941393352836 4 3.2369816709771446 5.852045763501826 5 1.782601164521612 4.028391512988961 6 1.1222316120754794 3.0432752261144196 7 0.7352545087255364 2.3261794699233027 8 0.48894094632542207 1.7678844580436073 9 0.36367742936713704 1.4793343448636678 >10 1.6983868926724408 13.6130099525773 >50 0.11302530264859392 3.495842148084306 >100 0.07718978864658683 7.227725718921746 >500 0.007005033132497192 2.2889341844222697 >1k 0.001718215674008745 0.9863737049659556 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.376829713223611E-4 2 0.0 0.0 0.0 0.0 2.376829713223611E-4 3 0.0 0.0 0.0 0.0 2.376829713223611E-4 4 0.0 0.0 0.0 0.0 2.376829713223611E-4 5 0.0 0.0 0.0 0.0 2.9710371415295135E-4 6 0.0 0.0 0.0 0.0 3.5652445698354166E-4 7 0.0 0.0 0.0 0.0 3.5652445698354166E-4 8 0.0 0.0 0.0 0.0 3.5652445698354166E-4 9 0.0 0.0 0.0 0.0 3.5652445698354166E-4 10 0.0 0.0 0.0 0.0 4.159451998141319E-4 11 0.0 0.0 0.0 0.0 4.159451998141319E-4 12 0.0 0.0 0.0 0.0 0.0010101526281200346 13 0.0 0.0 0.0 0.0 0.001069573370950625 14 0.0 0.0 0.0 0.0 0.001069573370950625 15 0.0 0.0 0.0 0.0 0.0013666770851035763 16 0.0 0.0 0.0 0.0 0.0013666770851035763 17 0.0 0.0 0.0 0.0 0.0014260978279341666 18 0.0 0.0 0.0 0.0 0.0014855185707647568 19 0.0 0.0 0.0 0.0 0.0014855185707647568 20 0.0 0.0 0.0 0.0 0.001723201542087118 21 0.0 0.0 0.0 0.0 0.0018420430277482985 22 0.0 0.0 0.0 0.0 0.0019014637705788888 23 0.0 0.0 0.0 5.9420742830590276E-5 0.0019014637705788888 24 0.0 0.0 0.0 1.7826222849177083E-4 0.001960884513409479 25 0.0 0.0 0.0 1.7826222849177083E-4 0.001960884513409479 26 0.0 0.0 0.0 1.7826222849177083E-4 0.0022579882275624305 27 0.0 0.0 0.0 1.7826222849177083E-4 0.0023174089703930207 28 0.0 0.0 0.0 5.942074283059027E-4 0.0023174089703930207 29 0.0 0.0 0.0 0.0016043600564259375 0.0023174089703930207 30 0.0 0.0 0.0 0.004218872740971909 0.0023174089703930207 31 0.0 0.0 0.0 0.010458050738183889 0.0024362504560542014 32 0.0 0.0 0.0 0.01699433244954882 0.0024956711988847915 33 0.0 0.0 0.0 0.025075553474509096 0.0026145126845459723 34 0.0 0.0 0.0 0.033810402670605866 0.0026739334273765624 35 0.0 0.0 0.0 0.04611049643653805 0.0026739334273765624 36 0.0 0.0 0.0 0.06441208522835985 0.0026739334273765624 37 0.0 0.0 0.0 0.09358766995817969 0.0027333541702071525 38 0.0 0.0 0.0 0.13963874565188714 0.0027333541702071525 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGTAT 110 7.2759576E-12 25.999964 8 GTATCAA 3355 0.0 24.591593 1 TATGCGA 115 3.5106495E-10 22.95649 12 GGTATCA 1515 0.0 21.783443 1 CCGTATG 125 9.968062E-10 21.1206 9 CGACGGT 375 0.0 19.359974 7 CGCAATA 345 0.0 19.131546 36 TACGACG 390 0.0 18.615358 5 TACCGTA 145 6.3118932E-9 18.206871 7 ACGACGG 400 0.0 18.149975 6 ATACCGT 425 0.0 18.117622 6 CGTCGTA 430 0.0 17.906954 10 CGTCTTA 175 1.9099389E-10 17.599977 15 ACGCTTA 150 9.607902E-9 17.599453 17 CATCGTT 340 0.0 17.470564 28 CTTATAT 190 3.274181E-11 17.368399 3 CGCTTAC 140 8.380812E-8 17.285177 18 CTAGCGG 370 0.0 17.24322 29 ATCGTTT 345 0.0 17.217367 29 AACGCAG 4735 0.0 17.191109 6 >>END_MODULE