##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064064_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2762986 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.350023489080293 32.0 32.0 32.0 32.0 32.0 2 31.413729566490748 32.0 32.0 32.0 32.0 32.0 3 31.485952878516215 32.0 32.0 32.0 32.0 32.0 4 31.56740099298368 32.0 32.0 32.0 32.0 32.0 5 31.518727565032904 32.0 32.0 32.0 32.0 32.0 6 35.106073284482804 36.0 36.0 36.0 36.0 36.0 7 35.11621593449985 36.0 36.0 36.0 36.0 36.0 8 35.07100578866487 36.0 36.0 36.0 36.0 36.0 9 35.173261102300195 36.0 36.0 36.0 36.0 36.0 10 35.03695277500501 36.0 36.0 36.0 36.0 36.0 11 35.179948070674264 36.0 36.0 36.0 36.0 36.0 12 35.07609086690993 36.0 36.0 36.0 36.0 36.0 13 35.12346678557184 36.0 36.0 36.0 36.0 36.0 14 35.067576889640414 36.0 36.0 36.0 36.0 36.0 15 35.03907366884957 36.0 36.0 36.0 36.0 36.0 16 35.05136616689335 36.0 36.0 36.0 36.0 36.0 17 35.00931745582496 36.0 36.0 36.0 36.0 36.0 18 35.010223359799866 36.0 36.0 36.0 36.0 36.0 19 35.01183827931086 36.0 36.0 36.0 36.0 36.0 20 35.00405829055956 36.0 36.0 36.0 36.0 36.0 21 35.001119802995746 36.0 36.0 36.0 36.0 36.0 22 34.990347037589046 36.0 36.0 36.0 36.0 36.0 23 34.93266234428984 36.0 36.0 36.0 36.0 36.0 24 34.90344286941736 36.0 36.0 36.0 32.0 36.0 25 34.87910036460554 36.0 36.0 36.0 32.0 36.0 26 34.8196107399748 36.0 36.0 36.0 32.0 36.0 27 34.81548187359618 36.0 36.0 36.0 32.0 36.0 28 34.79720925115075 36.0 36.0 36.0 32.0 36.0 29 34.76441900176114 36.0 36.0 36.0 32.0 36.0 30 34.751439203817895 36.0 36.0 36.0 32.0 36.0 31 34.7433461479718 36.0 36.0 36.0 32.0 36.0 32 34.70581465125049 36.0 36.0 36.0 32.0 36.0 33 34.68848448743497 36.0 36.0 36.0 32.0 36.0 34 34.68154706538506 36.0 36.0 36.0 32.0 36.0 35 34.64852988759262 36.0 36.0 36.0 32.0 36.0 36 34.62367525568352 36.0 36.0 36.0 32.0 36.0 37 34.615368662743855 36.0 36.0 36.0 32.0 36.0 38 34.579314191240925 36.0 36.0 36.0 32.0 36.0 39 34.57726676863364 36.0 36.0 36.0 32.0 36.0 40 34.562247510483225 36.0 36.0 36.0 32.0 36.0 41 34.55070890695791 36.0 36.0 36.0 32.0 36.0 42 34.48405710343809 36.0 36.0 36.0 32.0 36.0 43 34.48144073115101 36.0 36.0 36.0 32.0 36.0 44 34.419185620194966 36.0 36.0 36.0 32.0 36.0 45 34.39902590892607 36.0 36.0 36.0 32.0 36.0 46 34.37726828872821 36.0 36.0 36.0 32.0 36.0 47 34.36147486813179 36.0 36.0 36.0 32.0 36.0 48 34.311492349219286 36.0 36.0 36.0 32.0 36.0 49 34.301680500733625 36.0 36.0 36.0 32.0 36.0 50 33.70775566723827 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 0.0 17 2.0 18 4.0 19 7.0 20 23.0 21 82.0 22 298.0 23 819.0 24 2015.0 25 4905.0 26 9823.0 27 18125.0 28 29942.0 29 46573.0 30 67990.0 31 96521.0 32 140776.0 33 227155.0 34 475735.0 35 1642190.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.45438895709785 18.18056778169014 11.962528667068199 26.40251459414381 2 16.172873643758194 20.128586453832582 36.729478393870934 26.96906150853829 3 17.961808613094778 23.778392814422407 28.96677824912893 29.293020323353886 4 12.158223023931356 15.982093286031851 36.09037468883302 35.76930900120377 5 14.365074596831109 36.709306525621194 33.41953234652655 15.506086531021149 6 34.51247040786745 36.01363889219651 16.368118347538402 13.105772352397645 7 30.5147764049474 30.54210191437814 20.490368029371123 18.452753651303336 8 28.22860058957975 33.008069171566255 18.951315334683322 19.81201490417067 9 27.186498807798603 13.960844834300653 18.359720531199194 40.49293582670155 10 15.697354572421709 26.62072794499804 31.494204033650913 26.187713448929333 11 37.54493781182308 20.942097043595968 22.44293762000156 19.070027524579395 12 24.71853749159874 23.5307615439712 28.652335034033914 23.09836593039614 13 29.380081028630745 19.267788983899234 25.364661411942347 25.98746857552767 14 23.63652551703271 19.588538164256104 24.86125477654907 31.913681542162113 15 25.164620425636958 27.487493987232845 21.958245607558226 25.389639979571974 16 26.084884081176472 25.837758526338344 23.403781730371108 24.673575662114075 17 24.14232283478816 26.06535103688546 24.887132978596345 24.90519314973004 18 25.038020570558288 24.91054941443616 25.88391945212738 24.16751056287817 19 25.57468622714701 24.8720044184082 25.126765028849224 24.42654432559557 20 25.934892407250903 24.24623547529556 24.649606491576982 25.169265625876548 21 27.014686285055372 24.23475906139228 24.23631534868436 24.514239304867992 22 26.17721498829345 24.114444424739492 24.790706276513465 24.917634310453593 23 24.61249028669584 24.005677962390376 25.393246308401523 25.988585442512257 24 24.955111823225458 24.823007936729116 25.0909797656658 25.130900474379626 25 25.0584252737401 24.28500747937607 25.24554540088044 25.411021846003397 26 24.78297567995645 25.288979681659058 25.445884356006754 24.48216028237774 27 25.398427175898664 24.64274480861995 24.80772230790419 25.151105707577205 28 24.813625625395197 24.508723410185052 25.552825286035848 25.1248256783839 29 24.72314546277787 24.622780377087516 25.345206309427766 25.308867850706847 30 24.601040582726327 24.88476677374112 25.606442564357778 24.90775007917477 31 25.4017790084245 24.572214530680203 24.64666865741872 25.379337803476577 32 25.133745969342936 24.669810962229004 24.428650176427773 25.76779289200029 33 24.68067301713236 24.43737282117472 25.029552902409907 25.852401259283013 34 25.39084937418858 24.458529519601374 25.345462165925355 24.805158940284695 35 25.822678152678147 24.26163552242447 25.393092829736325 24.522593495161058 36 24.741066125277847 24.899023480411515 24.94372497756781 25.416185416742827 37 25.802767983240667 24.557074181342788 24.730045988277443 24.910111847139106 38 24.852566819544247 24.44163969802847 25.192297460127982 25.513496022299304 39 25.670114921311242 24.393243636003007 24.4916204190822 25.44502102360355 40 25.759036667861057 24.613758681969372 25.025679446670356 24.601525203499207 41 24.692947881309614 25.00975429315578 25.564355532584404 24.732942292950195 42 25.969561945808838 25.014341695371172 24.934933040117297 24.081163318702693 43 25.196339413198597 24.098163372777957 25.214544625390662 25.49095258863278 44 24.753830885817923 24.77735656753789 24.85730769202928 25.611504854614907 45 24.940624884633845 24.912466494048736 24.928427741154174 25.218480880163245 46 24.863642121645345 24.63269331692575 24.998715141424928 25.50494942000398 47 25.089696672690483 24.49485562934617 25.39057367867291 25.02487401929044 48 25.813557211769545 25.061601315705655 24.339577433794872 24.785264038729927 49 24.931314778641944 25.140075867717567 24.677022924993313 25.251586428647176 50 24.954676918544404 25.26633757289786 24.602117815762263 25.17686769279547 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 16.0 1 25.0 2 34.0 3 120.0 4 206.0 5 259.0 6 312.0 7 312.5 8 313.0 9 414.0 10 515.0 11 763.5 12 1012.0 13 1897.0 14 2782.0 15 3747.0 16 4712.0 17 4898.0 18 5084.0 19 5146.5 20 5209.0 21 6135.0 22 7061.0 23 8304.5 24 9548.0 25 12367.0 26 15186.0 27 19551.5 28 23917.0 29 28046.5 30 32176.0 31 36133.5 32 40091.0 33 46694.0 34 53297.0 35 62739.0 36 72181.0 37 86312.0 38 100443.0 39 109827.5 40 119212.0 41 131505.5 42 143799.0 43 147883.0 44 151967.0 45 168372.5 46 184778.0 47 196298.5 48 207819.0 49 215218.5 50 222618.0 51 216569.5 52 210521.0 53 208052.5 54 205584.0 55 204109.5 56 202635.0 57 196474.5 58 190314.0 59 173253.5 60 156193.0 61 137170.5 62 118148.0 63 102510.5 64 86873.0 65 73559.0 66 60245.0 67 51499.0 68 42753.0 69 38426.5 70 34100.0 71 25837.5 72 17575.0 73 15190.0 74 12805.0 75 9907.0 76 7009.0 77 6271.5 78 5534.0 79 4536.5 80 3539.0 81 2895.5 82 2252.0 83 1833.5 84 1415.0 85 996.5 86 578.0 87 416.0 88 254.0 89 177.0 90 100.0 91 96.0 92 92.0 93 72.0 94 52.0 95 56.5 96 61.0 97 47.5 98 34.0 99 33.0 100 32.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008469098287142967 2 7.238545544566639E-4 3 2.533490940598324E-4 4 0.0 5 0.0 6 1.8096363861416597E-4 7 0.0 8 3.6192727722833194E-5 9 0.001085781831684996 10 0.001085781831684996 11 3.6192727722833194E-5 12 2.533490940598324E-4 13 4.3431273267399836E-4 14 2.8954182178266556E-4 15 0.004162163688125818 16 6.514690990109975E-4 17 0.0 18 2.8954182178266556E-4 19 0.0 20 7.600472821794971E-4 21 0.0 22 1.0857818316849959E-4 23 8.324327376251636E-4 24 3.2573454950549877E-4 25 0.0019906000247558258 26 0.005863221891098978 27 0.006695654628724141 28 0.004813632787136815 29 0.0026420691237668235 30 0.004017392777234485 31 0.0076366655495178045 32 0.0035830800445604866 33 0.00521175279208798 34 0.0033659236782234868 35 0.003221152767332154 36 0.007781436460409137 37 0.003908814594065985 38 0.007564280094072139 39 0.005030789153473814 40 0.002750647306935323 41 0.0036192727722833195 42 0.0022801418465384915 43 0.0014839018366361609 44 0.0017372509306959934 45 0.0015924800198046606 46 0.001302938198021995 47 0.0022801418465384915 48 0.0020991782079243255 49 6.876618267338307E-4 50 0.0016286727475274937 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2762986.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.71512228877873 #Duplication Level Percentage of deduplicated Percentage of total 1 75.91251759517135 36.98087577897839 2 13.67919069824342 13.327668953529054 3 4.41000940134819 6.445024418440227 4 1.9093192864108166 3.7205089010330665 5 1.016410381444108 2.4757278013816975 6 0.5952595227169215 1.7398884265628936 7 0.4239433357850116 1.4456716012395736 8 0.2936766031161165 1.14451933073238 9 0.22413232843431188 0.9826770409691599 >10 1.3412703109183688 12.25789797916666 >50 0.10295016724535266 3.456741049362018 >100 0.07412423859683928 7.4544294814474625 >500 0.011513930903020405 3.9443468743535326 >1k 0.005682199666416617 4.624022362803837 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 3015 0.10912107408434209 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 2993 0.10832483407443975 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2990 0.10821625589127126 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2931 0.1060808849556241 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2887 0.10448840493581944 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 2794 0.10112248125759594 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2788 0.10090532489125895 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.238545544566639E-5 2 0.0 0.0 0.0 0.0 7.238545544566639E-5 3 0.0 0.0 0.0 0.0 7.238545544566639E-5 4 0.0 0.0 0.0 0.0 7.238545544566639E-5 5 0.0 0.0 0.0 0.0 7.238545544566639E-5 6 0.0 0.0 0.0 0.0 7.238545544566639E-5 7 0.0 0.0 0.0 0.0 7.238545544566639E-5 8 0.0 0.0 0.0 0.0 7.238545544566639E-5 9 0.0 0.0 0.0 0.0 7.238545544566639E-5 10 0.0 0.0 0.0 0.0 1.0857818316849959E-4 11 0.0 0.0 0.0 0.0 1.0857818316849959E-4 12 0.0 0.0 0.0 0.0 4.705054603968315E-4 13 0.0 0.0 0.0 0.0 5.066981881196648E-4 14 0.0 0.0 0.0 0.0 5.066981881196648E-4 15 0.0 0.0 0.0 0.0 5.790836435653311E-4 16 0.0 0.0 0.0 0.0 5.790836435653311E-4 17 0.0 0.0 0.0 0.0 5.790836435653311E-4 18 0.0 0.0 0.0 0.0 5.790836435653311E-4 19 0.0 0.0 0.0 0.0 5.790836435653311E-4 20 0.0 0.0 0.0 0.0 6.514690990109975E-4 21 0.0 0.0 0.0 3.6192727722833194E-5 6.514690990109975E-4 22 0.0 0.0 0.0 7.238545544566639E-5 6.876618267338307E-4 23 0.0 0.0 0.0 2.533490940598324E-4 6.876618267338307E-4 24 0.0 0.0 0.0 4.705054603968315E-4 6.876618267338307E-4 25 0.0 0.0 0.0 7.238545544566639E-4 6.876618267338307E-4 26 0.0 0.0 0.0 7.600472821794971E-4 6.876618267338307E-4 27 0.0 0.0 0.0 0.0013391309257448282 6.876618267338307E-4 28 0.0 0.0 0.0 0.002931610945549489 6.876618267338307E-4 29 0.0 0.0 0.0 0.006044185529713144 6.876618267338307E-4 30 0.0 3.6192727722833194E-5 0.0 0.012486491064377452 6.876618267338307E-4 31 0.0 3.6192727722833194E-5 0.0 0.03058285492579405 7.238545544566639E-4 32 0.0 3.6192727722833194E-5 0.0 0.049222109703053143 7.238545544566639E-4 33 0.0 3.6192727722833194E-5 0.0 0.06901953176744291 7.238545544566639E-4 34 0.0 3.6192727722833194E-5 0.0 0.09084374658431132 7.600472821794971E-4 35 0.0 3.6192727722833194E-5 0.0 0.11730063054970238 7.600472821794971E-4 36 0.0 3.6192727722833194E-5 0.0 0.1577641001438299 7.600472821794971E-4 37 0.0 3.6192727722833194E-5 0.0 0.21755448634195035 7.600472821794971E-4 38 0.0 3.6192727722833194E-5 0.0 0.29793853461436287 7.962400099023303E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3785 0.0 27.900394 1 GGTATCA 1590 0.0 23.384312 1 TCAACGC 5445 0.0 19.069178 4 AACGCAG 5640 0.0 18.448875 6 CAACGCA 5635 0.0 18.426207 5 TCGATCG 180 1.4551915E-11 18.332857 41 ATCAACG 5705 0.0 18.200119 3 TATCAAC 5930 0.0 17.69472 2 TAGGACG 400 0.0 17.048632 4 CGAGCCG 970 0.0 17.008944 15 CTAGCGG 910 0.0 16.924477 29 CGCAATA 900 0.0 16.868977 36 ACCCGTT 405 0.0 16.841509 30 ACGACGG 855 0.0 16.466515 6 CGGTCCA 1005 0.0 16.416594 10 CGACGGT 845 0.0 16.140717 7 TAGCGGC 955 0.0 16.127571 30 GTCCTAC 765 0.0 16.105034 1 ATACGAA 950 0.0 15.978534 40 GATATAC 470 0.0 15.915346 1 >>END_MODULE