##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064063_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1706573 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.262900561534725 32.0 32.0 32.0 32.0 32.0 2 30.893436729633013 32.0 32.0 32.0 32.0 32.0 3 30.910517159242527 32.0 32.0 32.0 32.0 32.0 4 30.93939081422242 32.0 32.0 32.0 32.0 32.0 5 30.852591714506207 32.0 32.0 32.0 32.0 32.0 6 34.5119810286463 36.0 36.0 36.0 32.0 36.0 7 34.45056965040464 36.0 36.0 36.0 32.0 36.0 8 34.409752175851835 36.0 36.0 36.0 32.0 36.0 9 34.5381351984357 36.0 36.0 36.0 32.0 36.0 10 34.25546695043224 36.0 36.0 36.0 32.0 36.0 11 34.52295917022008 36.0 36.0 36.0 32.0 36.0 12 34.35141479444477 36.0 36.0 36.0 32.0 36.0 13 34.42309763485066 36.0 36.0 36.0 32.0 36.0 14 34.34127634739328 36.0 36.0 36.0 32.0 36.0 15 34.27410723127578 36.0 36.0 36.0 32.0 36.0 16 34.2774771427885 36.0 36.0 36.0 32.0 36.0 17 34.20332092444917 36.0 36.0 36.0 32.0 36.0 18 34.20266053664273 36.0 36.0 36.0 32.0 36.0 19 34.20689299549448 36.0 36.0 36.0 32.0 36.0 20 34.18599262967362 36.0 36.0 36.0 32.0 36.0 21 34.17395622689448 36.0 36.0 36.0 32.0 36.0 22 34.15500303825269 36.0 36.0 36.0 32.0 36.0 23 34.0969100061937 36.0 36.0 36.0 32.0 36.0 24 34.09149095878114 36.0 36.0 36.0 32.0 36.0 25 33.69680523481855 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 3.0 4 16.0 5 12.0 6 59.0 7 36.0 8 96.0 9 114.0 10 174.0 11 62.0 12 108.0 13 97.0 14 151.0 15 269.0 16 463.0 17 610.0 18 822.0 19 1047.0 20 1599.0 21 2342.0 22 3603.0 23 5708.0 24 8355.0 25 12420.0 26 17681.0 27 23837.0 28 32894.0 29 44596.0 30 58832.0 31 80581.0 32 113805.0 33 161888.0 34 351979.0 35 782314.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.054592691508205 17.38501418014826 11.41821413372132 26.142178994622213 2 16.21507904370507 19.7973466724408 38.26949458557799 25.718079698276142 3 18.9604283264061 24.098751339691976 28.540170835997092 28.400649497904833 4 12.541605332983302 15.610672529698002 36.175778429920214 35.67194370739848 5 14.339317913716327 36.844871870753224 33.7790758660862 15.036734349444252 6 33.635984840271384 35.73079116225563 17.2337890589517 13.399434938521287 7 29.80936271372406 30.622938367292395 21.054911228176294 18.512787690807258 8 27.658056631036576 33.55106084275376 19.494007755186978 19.296874771022683 9 27.459684842344956 14.253561323713743 18.680519157687876 39.60623467625343 10 15.752479711716106 26.798007201234096 31.972201195984145 25.47731189106565 11 36.59220988767576 21.073605855541576 23.248971914835735 19.08521234194693 12 24.94725719841027 23.540235222927024 29.27709232658202 22.23541525208069 13 29.47109492731953 19.901665875068165 25.36340234899526 25.26383684861705 14 23.44092301485662 19.893653451923573 25.452922770921 31.212500762298813 15 24.635490477633976 27.844206223237496 22.424188410394304 25.096114888734228 16 25.081740929336902 25.868893178561127 24.490673090229322 24.558692801872652 17 23.582649301974314 26.18213460001536 25.57250185141426 24.662714246596064 18 24.219611789522574 25.257138567765008 26.811903995346025 23.711345647366393 19 25.478885075205408 24.932752308588178 25.616986939844473 23.971375676361944 20 25.71532457174358 24.676073353389985 25.311904384900043 24.296697689966397 21 26.290465025996372 24.284528024827033 24.73596061077691 24.689046338399685 22 25.651477832512313 24.73440065681445 25.128723903354445 24.48539760731879 23 24.178057929468398 24.667176507294553 25.80417193515015 25.350593628086905 24 24.74234542778224 25.024660008562094 25.64341803552683 24.58957652812883 25 24.640232606282318 24.86337371767166 25.726322851467774 24.770070824578248 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 127.0 1 127.0 2 355.0 3 583.0 4 583.0 5 583.0 6 1562.5 7 2542.0 8 2542.0 9 2542.0 10 2838.5 11 3135.0 12 3135.0 13 3135.0 14 3827.5 15 4520.0 16 4520.0 17 4520.0 18 7954.5 19 11389.0 20 11389.0 21 11389.0 22 18834.0 23 26279.0 24 26279.0 25 26279.0 26 39446.0 27 52613.0 28 52613.0 29 52613.0 30 67272.0 31 81931.0 32 81931.0 33 81931.0 34 98310.5 35 114690.0 36 114690.0 37 114690.0 38 129721.0 39 144752.0 40 144752.0 41 144752.0 42 164032.0 43 183312.0 44 183312.0 45 183312.0 46 202669.5 47 222027.0 48 222027.0 49 222027.0 50 225396.5 51 228766.0 52 228766.0 53 228766.0 54 212168.0 55 195570.0 56 195570.0 57 195570.0 58 178460.5 59 161351.0 60 161351.0 61 161351.0 62 140613.0 63 119875.0 64 119875.0 65 119875.0 66 97555.0 67 75235.0 68 75235.0 69 75235.0 70 56743.0 71 38251.0 72 38251.0 73 38251.0 74 28819.5 75 19388.0 76 19388.0 77 19388.0 78 15340.0 79 11292.0 80 11292.0 81 11292.0 82 7815.0 83 4338.0 84 4338.0 85 4338.0 86 3321.5 87 2305.0 88 2305.0 89 2305.0 90 1654.5 91 1004.0 92 1004.0 93 1004.0 94 707.0 95 410.0 96 410.0 97 410.0 98 649.0 99 888.0 100 888.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03908417629951956 2 0.0065628601882251735 3 0.0014063271831911087 4 0.003574414923944068 5 0.007734799507551098 6 0.012305362852922202 7 0.023497383352484774 8 0.036212924967171045 9 0.05197550881210473 10 0.06047206887721768 11 0.05713204181713879 12 0.06603878064401582 13 0.06814827141880248 14 0.07060934398938691 15 0.06222997785620656 16 0.069437404670061 17 0.06562860188225174 18 0.07992626157802801 19 0.07676202541584802 20 0.08221154325071357 21 0.07822694956500542 22 0.08045363427172467 23 0.08584455514062392 24 0.08103960393138764 25 0.08051223123769097 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1706573.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.433563215992685 #Duplication Level Percentage of deduplicated Percentage of total 1 78.43859865688336 42.69692418563339 2 12.776005126641191 13.908869654177398 3 3.7554680834850216 6.132705279840745 4 1.6040272631647159 3.492516777186092 5 0.8292229603308551 2.2568780215661097 6 0.5336095026140122 1.7427759955916549 7 0.34943672800954884 1.3314760356868194 8 0.24905840669732582 1.084570922034664 9 0.20692291369642538 1.0137196353178595 >10 1.0921914926260345 10.808816205218607 >50 0.08621514609731619 3.238908668462436 >100 0.06940618454577606 7.751101037738012 >500 0.007459229993188964 2.6907595077210464 >1k 0.0023783052152196696 1.8499780738252691 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 4109 0.2407749331555111 No Hit TATCAACGCAGAGTACTTTTTTTTT 2651 0.1553405567766512 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.9298482983148097E-4 2 0.0 0.0 0.0 0.0 2.9298482983148097E-4 3 0.0 0.0 0.0 0.0 2.9298482983148097E-4 4 0.0 0.0 0.0 0.0 2.9298482983148097E-4 5 0.0 0.0 0.0 5.8596965966296195E-5 4.6877572773036956E-4 6 0.0 0.0 0.0 5.8596965966296195E-5 5.273726936966658E-4 7 0.0 0.0 0.0 1.757908978988886E-4 5.273726936966658E-4 8 0.0 0.0 0.0 2.3438786386518478E-4 5.859696596629619E-4 9 0.0 0.0 0.0 2.3438786386518478E-4 5.859696596629619E-4 10 0.0 0.0 0.0 2.3438786386518478E-4 5.859696596629619E-4 11 0.0 0.0 0.0 2.3438786386518478E-4 5.859696596629619E-4 12 0.0 0.0 0.0 2.3438786386518478E-4 0.001464924149157405 13 0.0 0.0 0.0 2.3438786386518478E-4 0.001523521115123701 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGGG 35 9.9367084E-5 19.000908 7 TTCGCGC 45 6.749836E-4 14.78152 17 CGTCGTA 170 0.0 13.413981 10 CGCGGTC 135 1.8189894E-12 13.372579 10 TAGGCCC 50 0.0015037564 13.2951765 4 AGAACCG 180 0.0 13.191593 5 CTAGACA 65 5.4716802E-5 13.149076 4 CGAACGT 90 5.4298107E-7 12.662073 4 CGCCAGT 190 0.0 12.503165 18 AACCGCG 145 7.2759576E-12 12.448872 7 CGGTCCT 155 1.8189894E-12 12.260449 12 CGCATCG 180 0.0 12.140894 13 ACCGGCG 110 3.808782E-8 12.092196 8 GTATCAA 2595 0.0 12.073358 1 TCGAACG 95 1.0471158E-6 11.993188 3 CGACCAT 215 0.0 11.932202 10 CCGTCGT 185 0.0 11.812762 9 GTTCGCG 65 8.007094E-4 11.69527 16 TACCGTC 200 0.0 11.400544 7 GACTGAT 85 5.320734E-5 11.177006 7 >>END_MODULE