FastQCFastQC Report
Thu 2 Feb 2017
SRR4064063_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4064063_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1706573
Sequences flagged as poor quality0
Sequence length50
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATCAA31750.023.4894051
ATTATAC2300.021.9990183
CGTATAC755.4762088E-520.5324173
CGGATCG654.9338164E-420.30738326
GGCGTAA550.00448551319.999116
TAGGACG9600.019.7074554
CCGTATA708.1292336E-418.855752
AACGCAG40150.018.5745146
GTATTAG3000.018.3330541
GTCCTAA5350.018.0931821
GTATTAC1601.1023076E-917.8747251
AGGACGT10150.017.5558685
GGACGTG9750.017.3735856
TTAGGAC5400.017.1103483
ATCAACG43950.016.9685273
TCAACGC44100.016.9606954
TATCAAC44550.016.937022
GTAGGAC11500.016.8340323
TAACATA1451.2507371E-716.688914
TGTAGGA12000.016.68212
Produced by FastQC (version 0.11.5)