##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064063_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1706573 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.3470258816939 32.0 32.0 32.0 32.0 32.0 2 31.406176588988576 32.0 32.0 32.0 32.0 32.0 3 31.49040093802023 32.0 32.0 32.0 32.0 32.0 4 31.568458542353593 32.0 32.0 32.0 32.0 32.0 5 31.519691803397805 32.0 32.0 32.0 32.0 32.0 6 35.11314722546296 36.0 36.0 36.0 36.0 36.0 7 35.126860087438395 36.0 36.0 36.0 36.0 36.0 8 35.08077181579692 36.0 36.0 36.0 36.0 36.0 9 35.18920843116585 36.0 36.0 36.0 36.0 36.0 10 35.04718227699606 36.0 36.0 36.0 36.0 36.0 11 35.19222558894346 36.0 36.0 36.0 36.0 36.0 12 35.10090514733328 36.0 36.0 36.0 36.0 36.0 13 35.14007663311209 36.0 36.0 36.0 36.0 36.0 14 35.085613097125055 36.0 36.0 36.0 36.0 36.0 15 35.05504130207146 36.0 36.0 36.0 36.0 36.0 16 35.07376010284939 36.0 36.0 36.0 36.0 36.0 17 35.032445140055536 36.0 36.0 36.0 36.0 36.0 18 35.033716694217006 36.0 36.0 36.0 36.0 36.0 19 35.031251519858806 36.0 36.0 36.0 36.0 36.0 20 35.02498398837905 36.0 36.0 36.0 36.0 36.0 21 35.01779238274601 36.0 36.0 36.0 36.0 36.0 22 35.00517997179142 36.0 36.0 36.0 36.0 36.0 23 34.95644956295453 36.0 36.0 36.0 36.0 36.0 24 34.92389133075468 36.0 36.0 36.0 36.0 36.0 25 34.90644877189549 36.0 36.0 36.0 32.0 36.0 26 34.84791450468278 36.0 36.0 36.0 32.0 36.0 27 34.832374589308515 36.0 36.0 36.0 32.0 36.0 28 34.81672275372926 36.0 36.0 36.0 32.0 36.0 29 34.78767096397283 36.0 36.0 36.0 32.0 36.0 30 34.77037665543754 36.0 36.0 36.0 32.0 36.0 31 34.76047962788583 36.0 36.0 36.0 32.0 36.0 32 34.71485368630583 36.0 36.0 36.0 32.0 36.0 33 34.70281728352669 36.0 36.0 36.0 32.0 36.0 34 34.69571708916056 36.0 36.0 36.0 32.0 36.0 35 34.6558576750013 36.0 36.0 36.0 32.0 36.0 36 34.62828311475688 36.0 36.0 36.0 32.0 36.0 37 34.611707790994 36.0 36.0 36.0 32.0 36.0 38 34.57199545521932 36.0 36.0 36.0 32.0 36.0 39 34.56569745331726 36.0 36.0 36.0 32.0 36.0 40 34.545937384454106 36.0 36.0 36.0 32.0 36.0 41 34.52772720534076 36.0 36.0 36.0 32.0 36.0 42 34.47111140279379 36.0 36.0 36.0 32.0 36.0 43 34.46477121107623 36.0 36.0 36.0 32.0 36.0 44 34.38900123229419 36.0 36.0 36.0 32.0 36.0 45 34.367964921512296 36.0 36.0 36.0 32.0 36.0 46 34.33487228498283 36.0 36.0 36.0 32.0 36.0 47 34.30555622290989 36.0 36.0 36.0 32.0 36.0 48 34.2666677604767 36.0 36.0 36.0 32.0 36.0 49 34.236703029990515 36.0 36.0 36.0 32.0 36.0 50 33.652607887268815 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 1.0 17 2.0 18 0.0 19 3.0 20 14.0 21 47.0 22 160.0 23 500.0 24 1249.0 25 2799.0 26 5712.0 27 10997.0 28 18526.0 29 28817.0 30 41530.0 31 59884.0 32 87190.0 33 141370.0 34 295223.0 35 1012548.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.45061347482195 18.118970222576177 12.040655709268549 26.38976059333332 2 15.610110824831372 20.489145752847676 37.849788493507724 26.050954928813226 3 18.06878390588798 24.74794352622407 28.911753572387056 28.271518995500895 4 12.225085009548376 16.284624214727412 36.34945589787252 35.140834877851695 5 14.01938270440233 37.21112428240691 33.622353101801096 15.147139911389667 6 33.69854954590175 36.080697586795495 16.994859276126544 13.225893591176213 7 29.759816896200746 30.70393121184971 21.07738725504271 18.45886463690683 8 27.61276546622969 33.80078086316847 19.275589148545066 19.31086452205678 9 27.58001779019523 14.132071690502169 18.46060901533965 39.82730150396295 10 15.698224963024945 26.99694589571042 32.014361087476765 25.290468053787862 11 36.873547161475074 21.05822604717173 23.145391377925232 18.92283541342796 12 25.023087218119127 23.60398506479656 29.190857461624827 22.182070255459482 13 29.65233711890597 19.85055377257383 25.410019061660044 25.087090046860162 14 23.46225266924142 19.879219792203195 25.45654414612694 31.201983392428446 15 24.784032403050443 27.835530610498875 22.365230476775352 25.015206509675323 16 25.122263357557472 25.89352159487906 24.43685022870543 24.547364818858032 17 23.65582954845764 26.186632508541972 25.57154015679376 24.585997786206626 18 24.37575040915427 25.23484254079384 26.69355883061277 23.69584821943912 19 25.654396266670105 24.8431798698327 25.60318251841556 23.899241345081634 20 25.90572714535758 24.54995643274734 25.345359106083183 24.198957315811896 21 26.470769196512546 24.322604424188125 24.751182633265614 24.455443746033716 22 25.833468594663106 24.736650585705974 25.052546829230277 24.377333990400647 23 24.30522472413787 24.68065856498369 25.75744524508089 25.25667146579755 24 24.923632967119254 25.058289741767215 25.614437456381577 24.403639834731955 25 24.794541017084228 24.748483046154657 25.792756710195157 24.664219226565955 26 24.264660208966944 25.469296626408592 26.06713194920568 24.198911215418782 27 24.877613710546022 25.27275412222338 25.252068290201713 24.597563877028882 28 24.225238877110574 25.165921878717345 25.819940627918943 24.788898616253135 29 24.5264809136195 25.018355951342226 25.550839685889095 24.904323449149178 30 24.342889020540596 25.205168638219348 25.868857319825167 24.583085021414888 31 25.057942231814636 24.842464521187665 25.087946199136095 25.0116470478616 32 24.703403288317904 25.22159052953193 25.06601130015013 25.008994882000042 33 24.30599545622086 25.000981535989553 25.64973287571293 25.043290132076656 34 24.89522610768506 24.986522374031075 25.813697018280347 24.304554500003515 35 25.236239067021227 25.03800100085905 25.664709873931606 24.061050058188115 36 24.438236650557265 25.305765102783134 25.517021524714657 24.73897672194494 37 25.009463648456226 25.168499821274747 25.15924126736711 24.662795262901913 38 24.58706574951683 25.295966001854147 25.431276465824293 24.68569178280473 39 25.16374128847122 24.8893204406907 25.117916581453414 24.829021689384664 40 25.51285056312773 25.05244529867451 25.45290470777128 23.981799430426477 41 24.587393475294004 25.12825741607673 25.86853197337988 24.415817135249387 42 25.368596908714068 25.59314495596057 25.341876159876804 23.696381975448556 43 24.669303565673435 24.950631390817733 25.615188538278982 24.76487650522985 44 24.324441519767063 25.430942292378017 25.231124062509707 25.013492125345216 45 24.47527328448248 25.55276565947186 25.237862242939723 24.734098813105938 46 24.677963082436648 24.987416198326574 25.204519738256927 25.130100980979854 47 24.986053521661578 25.019337553998653 25.432575223085053 24.562033701254716 48 25.144767452081123 25.586130920640127 24.71998734273643 24.549114284542316 49 24.740853855051608 25.481112362487007 24.948932534692474 24.82910124776891 50 24.557618317103785 25.89246893454544 24.785328128314422 24.764584620036352 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 22.0 1 29.0 2 36.0 3 95.0 4 154.0 5 205.5 6 257.0 7 255.5 8 254.0 9 337.5 10 421.0 11 661.0 12 901.0 13 1629.5 14 2358.0 15 3271.0 16 4184.0 17 4434.0 18 4684.0 19 4800.0 20 4916.0 21 5417.5 22 5919.0 23 6823.5 24 7728.0 25 9151.5 26 10575.0 27 13536.5 28 16498.0 29 20032.0 30 23566.0 31 27368.0 32 31170.0 33 36985.0 34 42800.0 35 49770.0 36 56740.0 37 63951.5 38 71163.0 39 75206.0 40 79249.0 41 84954.0 42 90659.0 43 92151.5 44 93644.0 45 101895.0 46 110146.0 47 115993.0 48 121840.0 49 126095.5 50 130351.0 51 127755.0 52 125159.0 53 123080.5 54 121002.0 55 120536.5 56 120071.0 57 115941.0 58 111811.0 59 101576.0 60 91341.0 61 80083.0 62 68825.0 63 59615.5 64 50406.0 65 42400.5 66 34395.0 67 29448.0 68 24501.0 69 21595.0 70 18689.0 71 14616.0 72 10543.0 73 9018.0 74 7493.0 75 5820.5 76 4148.0 77 3617.5 78 3087.0 79 2569.5 80 2052.0 81 1630.0 82 1208.0 83 1025.0 84 842.0 85 615.0 86 388.0 87 274.0 88 160.0 89 125.0 90 90.0 91 67.0 92 44.0 93 38.0 94 32.0 95 32.5 96 33.0 97 19.5 98 6.0 99 9.0 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008555157031079244 2 3.515817957977772E-4 3 6.445666256292582E-4 4 0.0 5 0.0 6 2.3438786386518478E-4 7 0.0 8 0.0 9 8.789544894944429E-4 10 9.961484214270355E-4 11 0.0 12 5.8596965966296195E-5 13 3.515817957977772E-4 14 1.1719393193259239E-4 15 0.003925996719741845 16 6.445666256292582E-4 17 0.0 18 2.3438786386518478E-4 19 0.0 20 9.375514554607391E-4 21 0.0 22 0.0 23 8.203575235281467E-4 24 7.031635915955544E-4 25 0.0016407150470562934 26 0.004863548175202584 27 0.005332323902932954 28 0.002754057400415921 29 0.0024610725705844403 30 0.0029298482983148096 31 0.007734799507551098 32 0.002754057400415921 33 0.0037502058218429565 34 0.002402475604618144 35 0.0022852816726855515 36 0.0067972480520903595 37 0.002519669536550736 38 0.007441814677719617 39 0.004101787617640734 40 0.0019336998768877745 41 0.002578266502517033 42 0.001992296842854071 43 0.0013477302172248125 44 0.0012891332512585164 45 0.0010547453873933316 46 8.203575235281467E-4 47 0.0028712513323485137 48 0.002519669536550736 49 4.1017876176407334E-4 50 8.789544894944429E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1706573.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.08820181997134 #Duplication Level Percentage of deduplicated Percentage of total 1 79.22025581953778 46.017622082750705 2 12.606563205678198 14.6458517549532 3 3.660553344007396 6.3790488425841785 4 1.4645474166156964 3.4029170364516097 5 0.7723992350762546 2.2433641326350484 6 0.46712432296086165 1.6280647168300804 7 0.31605532270302433 1.2851359760014611 8 0.2255426755192553 1.048109476366305 9 0.18588127968335136 0.9717758359920949 >10 0.9462412823996064 9.912995668634359 >50 0.07315229335703721 2.9348266423867813 >100 0.055089664989426725 6.5528171742541375 >500 0.005376758246534629 2.120930739219792 >1k 0.001217379225630482 0.856539920940226 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.9298482983148097E-4 2 0.0 0.0 0.0 0.0 2.9298482983148097E-4 3 0.0 0.0 0.0 0.0 3.515817957977772E-4 4 0.0 0.0 0.0 0.0 3.515817957977772E-4 5 0.0 0.0 0.0 5.8596965966296195E-5 4.101787617640734E-4 6 0.0 0.0 0.0 5.8596965966296195E-5 4.6877572773036956E-4 7 0.0 0.0 0.0 5.8596965966296195E-5 5.273726936966658E-4 8 0.0 0.0 0.0 1.1719393193259239E-4 5.273726936966658E-4 9 0.0 0.0 0.0 1.1719393193259239E-4 5.273726936966658E-4 10 0.0 0.0 0.0 1.1719393193259239E-4 5.273726936966658E-4 11 0.0 0.0 0.0 1.1719393193259239E-4 5.273726936966658E-4 12 0.0 0.0 0.0 1.1719393193259239E-4 0.0011133423533596278 13 0.0 0.0 0.0 1.1719393193259239E-4 0.0011719393193259239 14 0.0 0.0 0.0 1.1719393193259239E-4 0.0011719393193259239 15 0.0 0.0 0.0 1.1719393193259239E-4 0.001464924149157405 16 0.0 0.0 0.0 1.1719393193259239E-4 0.0015821180810899973 17 0.0 0.0 0.0 1.1719393193259239E-4 0.0015821180810899973 18 0.0 0.0 0.0 1.1719393193259239E-4 0.0016993120130225896 19 0.0 0.0 0.0 1.1719393193259239E-4 0.0016993120130225896 20 0.0 0.0 0.0 2.3438786386518478E-4 0.0019922968428540706 21 0.0 0.0 0.0 2.3438786386518478E-4 0.002050893808820367 22 0.0 0.0 0.0 2.9298482983148097E-4 0.002109490774786663 23 0.0 0.0 0.0 5.859696596629619E-4 0.002109490774786663 24 0.0 0.0 0.0 9.375514554607391E-4 0.002109490774786663 25 0.0 0.0 0.0 0.0010547453873933316 0.002109490774786663 26 0.0 0.0 0.0 0.0011719393193259239 0.0021680877407529594 27 0.0 0.0 0.0 0.0012305362852922201 0.0022266847067192556 28 0.0 0.0 0.0 0.0022266847067192556 0.0023438786386518477 29 0.0 0.0 0.0 0.004394772447472215 0.0023438786386518477 30 0.0 0.0 0.0 0.0092583206226748 0.0023438786386518477 31 0.0 0.0 0.0 0.02173947437349589 0.002402475604618144 32 0.0 0.0 0.0 0.03615432800120475 0.0024610725705844403 33 0.0 0.0 0.0 0.05004180893521695 0.0024610725705844403 34 0.0 0.0 0.0 0.06767949569107211 0.0026368634684833287 35 0.0 0.0 0.0 0.08801264288137689 0.0026368634684833287 36 0.0 0.0 0.0 0.11824867731998573 0.0026368634684833287 37 0.0 0.0 0.0 0.1619034169648764 0.0026368634684833287 38 0.0 0.0 0.0 0.21973862237361075 0.0028126543663822175 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3175 0.0 23.489405 1 ATTATAC 230 0.0 21.999018 3 CGTATAC 75 5.4762088E-5 20.532417 3 CGGATCG 65 4.9338164E-4 20.307383 26 GGCGTAA 55 0.004485513 19.99911 6 TAGGACG 960 0.0 19.707455 4 CCGTATA 70 8.1292336E-4 18.85575 2 AACGCAG 4015 0.0 18.574514 6 GTATTAG 300 0.0 18.333054 1 GTCCTAA 535 0.0 18.093182 1 GTATTAC 160 1.1023076E-9 17.874725 1 AGGACGT 1015 0.0 17.555868 5 GGACGTG 975 0.0 17.373585 6 TTAGGAC 540 0.0 17.110348 3 ATCAACG 4395 0.0 16.968527 3 TCAACGC 4410 0.0 16.960695 4 TATCAAC 4455 0.0 16.93702 2 GTAGGAC 1150 0.0 16.834032 3 TAACATA 145 1.2507371E-7 16.68891 4 TGTAGGA 1200 0.0 16.6821 2 >>END_MODULE