##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064062_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2278522 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.28614689697971 32.0 32.0 32.0 32.0 32.0 2 31.436198553272693 32.0 32.0 32.0 32.0 32.0 3 31.503097622054998 32.0 32.0 32.0 32.0 32.0 4 31.58162440388989 32.0 32.0 32.0 32.0 32.0 5 31.53514120118217 32.0 32.0 32.0 32.0 32.0 6 35.12895376915387 36.0 36.0 36.0 36.0 36.0 7 35.14792132794856 36.0 36.0 36.0 36.0 36.0 8 35.09607675501926 36.0 36.0 36.0 36.0 36.0 9 35.19898469270869 36.0 36.0 36.0 36.0 36.0 10 35.068522928459764 36.0 36.0 36.0 36.0 36.0 11 35.20377595651918 36.0 36.0 36.0 36.0 36.0 12 35.12066374605995 36.0 36.0 36.0 36.0 36.0 13 35.15304219138547 36.0 36.0 36.0 36.0 36.0 14 35.103563187013336 36.0 36.0 36.0 36.0 36.0 15 35.07578070345601 36.0 36.0 36.0 36.0 36.0 16 35.087833692191694 36.0 36.0 36.0 36.0 36.0 17 35.061828676659694 36.0 36.0 36.0 36.0 36.0 18 35.05246295624971 36.0 36.0 36.0 36.0 36.0 19 35.04244286427781 36.0 36.0 36.0 36.0 36.0 20 35.03661715796468 36.0 36.0 36.0 36.0 36.0 21 35.02752003272297 36.0 36.0 36.0 36.0 36.0 22 35.006291797928654 36.0 36.0 36.0 36.0 36.0 23 34.9701341483646 36.0 36.0 36.0 36.0 36.0 24 34.947297414727615 36.0 36.0 36.0 36.0 36.0 25 34.91944778237823 36.0 36.0 36.0 36.0 36.0 26 34.86676758003653 36.0 36.0 36.0 32.0 36.0 27 34.86043496617544 36.0 36.0 36.0 32.0 36.0 28 34.8190607771178 36.0 36.0 36.0 32.0 36.0 29 34.78764084788297 36.0 36.0 36.0 32.0 36.0 30 34.76163890451793 36.0 36.0 36.0 32.0 36.0 31 34.75474408410364 36.0 36.0 36.0 32.0 36.0 32 34.708107711929046 36.0 36.0 36.0 32.0 36.0 33 34.69981417778718 36.0 36.0 36.0 32.0 36.0 34 34.6699105823863 36.0 36.0 36.0 32.0 36.0 35 34.63567654821854 36.0 36.0 36.0 32.0 36.0 36 34.59340791969531 36.0 36.0 36.0 32.0 36.0 37 34.56953849907967 36.0 36.0 36.0 32.0 36.0 38 34.52407525580179 36.0 36.0 36.0 32.0 36.0 39 34.489159639450484 36.0 36.0 36.0 32.0 36.0 40 34.48895775419329 36.0 36.0 36.0 32.0 36.0 41 34.46004295767168 36.0 36.0 36.0 32.0 36.0 42 34.393293547308296 36.0 36.0 36.0 32.0 36.0 43 34.3892593532123 36.0 36.0 36.0 32.0 36.0 44 34.3073834705129 36.0 36.0 36.0 32.0 36.0 45 34.26464348380222 36.0 36.0 36.0 32.0 36.0 46 34.20264013250695 36.0 36.0 36.0 32.0 36.0 47 34.17389957173992 36.0 36.0 36.0 32.0 36.0 48 34.10438126118598 36.0 36.0 36.0 32.0 36.0 49 34.06943097323616 36.0 36.0 36.0 32.0 36.0 50 33.50453539619104 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 0.0 16 1.0 17 5.0 18 4.0 19 4.0 20 14.0 21 72.0 22 269.0 23 723.0 24 1901.0 25 4243.0 26 8802.0 27 16044.0 28 26899.0 29 40704.0 30 56961.0 31 81199.0 32 115520.0 33 185486.0 34 384750.0 35 1354920.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.2712215320911 18.524731698174655 12.168268511190966 26.035778258543278 2 14.73898201537677 20.899871933401858 39.730270151178274 24.630875900043097 3 18.16654107305949 25.472314619227536 29.498844202337228 26.86230010537574 4 11.694861844651928 16.71912757480507 37.34793870763591 34.23807187290709 5 13.030815590106219 38.247600857046805 34.24768336667366 14.473900186173317 6 32.36807098652325 37.215961083459106 17.519509400193193 12.896458529824443 7 28.81592928044113 31.305482810998893 21.46537161606147 18.41321629249851 8 26.719821006775447 35.32421455662925 19.55056830699901 18.40539612959629 9 27.63128039004591 13.937013852528482 18.721124107472413 39.71058164995319 10 15.270555664789404 27.643103169810264 32.94524107130318 24.14110009409716 11 36.25639778768869 20.905130606594977 24.278326037668275 18.560145568048057 12 24.978033967693037 23.613945555839365 30.56324330112819 20.84477717533941 13 29.894918216326367 20.487370918990518 25.68085034480852 23.936860519874603 14 22.70381651247301 20.74012955778312 26.36167336692239 30.194380562821483 15 24.008779733755144 29.50892917883331 22.97754285957561 23.504748227835933 16 23.83577119021955 26.20601061047073 26.315643948836602 23.642574250473118 17 22.480493934225784 26.92864058367661 26.711306715493638 23.879558766603964 18 23.011688309408402 25.610090076172387 28.923738082155225 22.454483532263982 19 25.172513222392944 24.81763389496959 26.466378848384544 23.54347403425292 20 25.392625349570856 25.210488617990368 26.54087674917095 22.856009283267824 21 25.65048746511993 24.560043747657474 25.51706764297207 24.272401144250527 22 25.091561667907968 25.748918486086797 25.97744412050108 23.182075725504152 23 23.370151269975235 25.762285775478617 26.768513971197834 24.09904898334832 24 24.41936963329186 25.335668187393985 26.921218425158493 23.323743754155668 25 24.09690692239327 25.501179517001503 27.065164199738863 23.336749360866367 26 22.769686824361987 26.61900753247232 27.60544451769266 23.00586112547303 27 23.525652645453064 26.134786060803698 26.80486714030709 23.534694153436146 28 22.99148221412398 26.385868384473554 26.549052430884885 24.073596970517585 29 23.57185806140139 25.45432201716079 26.366389431411708 24.607430490026115 30 23.140104484640897 25.974128574130944 26.880019100947543 24.005747840280613 31 24.277916621677733 25.36067958309961 26.235922852535488 24.12548094268717 32 23.51912866660025 26.469218618536637 26.156504519102768 23.855148195760343 33 23.023917128136347 26.0206135070569 27.151973153195936 23.803496211610824 34 23.87988299037282 26.03257923715516 27.1689244199443 22.91861335252771 35 23.930420905855446 26.210223385004582 26.942346154808348 22.91700955433162 36 22.97303525146543 26.427604247820234 26.889518488200864 23.70984201251347 37 23.751221237819443 26.30276339894295 25.86733121900821 24.078684144229392 38 23.62823010146888 26.717768334230186 26.125010643742314 23.528990920558616 39 24.49130608624436 25.555765738996932 26.05799687767865 23.894931297080056 40 25.139425252396247 25.766866318975833 26.400934665987265 22.69277376264066 41 23.87366964838646 25.519445550221004 27.479427801227068 23.127457000165464 42 24.320651875753523 26.92639054874958 26.40538325921199 22.347574316284913 43 23.076993974079326 26.396385325368993 27.014513998305894 23.512106702245784 44 22.90743813767645 26.751875257572237 26.160079034903426 24.180607569847886 45 23.13219942049136 26.83203115056428 26.185328653024246 23.85044077592011 46 23.40425158394236 25.76980739892877 26.01865619892455 24.80728481820432 47 24.302130683252056 25.884990416818997 26.201386807205356 23.611492092723584 48 23.72290564777375 26.313983093062767 25.586214978189343 24.376896280974144 49 23.907068930255175 26.29433497212647 25.83061005764303 23.967986039975315 50 23.409200730482823 27.3794565091927 25.30466409157281 23.90667866875167 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 253.0 1 177.0 2 101.0 3 256.0 4 411.0 5 473.5 6 536.0 7 508.0 8 480.0 9 697.5 10 915.0 11 1361.5 12 1808.0 13 3274.5 14 4741.0 15 6586.5 16 8432.0 17 9146.5 18 9861.0 19 9962.0 20 10063.0 21 10886.0 22 11709.0 23 13346.5 24 14984.0 25 16654.5 26 18325.0 27 24179.0 28 30033.0 29 37008.5 30 43984.0 31 51454.5 32 58925.0 33 70882.5 34 82840.0 35 97194.5 36 111549.0 37 116914.0 38 122279.0 39 120734.5 40 119190.0 41 121506.0 42 123822.0 43 123606.5 44 123391.0 45 131956.0 46 140521.0 47 146629.0 48 152737.0 49 155498.0 50 158259.0 51 153696.0 52 149133.0 53 146750.0 54 144367.0 55 142575.5 56 140784.0 57 134525.5 58 128267.0 59 116786.0 60 105305.0 61 92332.5 62 79360.0 63 67899.5 64 56439.0 65 48434.5 66 40430.0 67 34775.5 68 29121.0 69 25361.0 70 21601.0 71 16796.0 72 11991.0 73 10147.0 74 8303.0 75 6530.5 76 4758.0 77 4073.5 78 3389.0 79 2756.5 80 2124.0 81 1729.0 82 1334.0 83 1074.5 84 815.0 85 615.0 86 415.0 87 288.0 88 161.0 89 118.5 90 76.0 91 67.5 92 59.0 93 50.0 94 41.0 95 44.5 96 48.0 97 37.5 98 27.0 99 26.0 100 25.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00926038897144728 2 8.777619878149081E-4 3 3.9499289451670863E-4 4 0.0 5 0.0 6 2.1944049695372703E-4 7 4.388809939074541E-5 8 0.0 9 9.216500872056536E-4 10 0.0011410905841593804 11 0.0 12 1.7555239756298163E-4 13 4.8276909329819943E-4 14 8.777619878149081E-5 15 0.004081593243339322 16 7.899857890334173E-4 17 0.0 18 2.6332859634447246E-4 19 4.388809939074541E-5 20 6.144333914704357E-4 21 0.0 22 1.3166429817223623E-4 23 5.705452920796902E-4 24 3.0721669573521783E-4 25 0.002062740671365034 26 0.005266571926889448 27 0.006188222014095102 28 0.004959355231154231 29 0.003159943156133669 30 0.004432698038465285 31 0.008075410287897154 32 0.0036427122494318686 33 0.004959355231154231 34 0.0033793836530873964 35 0.0034671598518688867 36 0.007768193592161937 37 0.004213257541511559 38 0.008250962685460135 39 0.003906040845776341 40 0.00267717406283547 41 0.0036427122494318686 42 0.0022382930689280158 43 0.001404419180503853 44 0.0015360834786760892 45 0.0017555239756298162 46 0.001316642981722362 47 0.0022382930689280158 48 0.0021505168701465246 49 7.022095902519265E-4 50 0.0012727548823316167 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2278522.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.853235082126865 #Duplication Level Percentage of deduplicated Percentage of total 1 69.20809316212745 33.11831151673022 2 15.818691773348498 15.13951152243504 3 6.27612981012764 9.009993456299464 4 3.09258669635338 5.919611127698256 5 1.6735683841641444 4.0042830656711 6 1.0190571721479624 2.925910945255432 7 0.6364327486010546 2.131875615293929 8 0.4340836360965092 1.6617845026744529 9 0.3175796898727458 1.3677494001110504 >10 1.3639412614298108 11.250185033962708 >50 0.08266190053223837 2.7512297199276476 >100 0.0674853074967707 6.629330313897906 >500 0.006828055904080187 2.239392441786289 >1k 0.0028604017976551583 1.8508313382564918 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2343 0.1028298168725165 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.777619878149081E-5 2 0.0 0.0 0.0 8.777619878149081E-5 8.777619878149081E-5 3 0.0 0.0 0.0 8.777619878149081E-5 8.777619878149081E-5 4 0.0 0.0 0.0 8.777619878149081E-5 8.777619878149081E-5 5 0.0 0.0 0.0 8.777619878149081E-5 8.777619878149081E-5 6 0.0 0.0 0.0 8.777619878149081E-5 2.1944049695372703E-4 7 0.0 0.0 0.0 1.316642981722362E-4 2.1944049695372703E-4 8 0.0 0.0 0.0 1.316642981722362E-4 3.0721669573521783E-4 9 0.0 0.0 0.0 1.316642981722362E-4 3.9499289451670863E-4 10 0.0 0.0 0.0 2.1944049695372703E-4 4.3888099390745406E-4 11 0.0 0.0 0.0 2.1944049695372703E-4 4.3888099390745406E-4 12 0.0 0.0 0.0 3.0721669573521783E-4 5.266571926889448E-4 13 0.0 0.0 0.0 3.0721669573521783E-4 6.58321490861181E-4 14 0.0 0.0 0.0 3.0721669573521783E-4 7.022095902519265E-4 15 0.0 0.0 0.0 3.5110479512596326E-4 7.460976896426719E-4 16 0.0 0.0 0.0 3.9499289451670863E-4 7.899857890334173E-4 17 0.0 0.0 0.0 6.144333914704357E-4 7.899857890334173E-4 18 0.0 0.0 0.0 6.58321490861181E-4 7.899857890334173E-4 19 0.0 0.0 0.0 7.022095902519265E-4 7.899857890334173E-4 20 0.0 0.0 0.0 9.216500872056535E-4 8.338738884241626E-4 21 0.0 0.0 0.0 0.0010094262859871442 9.655381865963989E-4 22 0.0 0.0 0.0 0.001184978683550126 0.0010094262859871442 23 0.0 0.0 0.0 0.002062740671365034 0.0012727548823316167 24 0.0 0.0 0.0 0.0037743765476041047 0.001316642981722362 25 0.0 0.0 0.0 0.004696026634809758 0.0013605310811131074 26 0.0 0.0 0.0 0.005573788622624667 0.0014483072798945984 27 0.0 0.0 0.0 0.006670991107393301 0.0014483072798945984 28 0.0 0.0 0.0 0.010006486661089952 0.0014483072798945984 29 0.0 0.0 0.0 0.014746401395290456 0.0014921953792853438 30 0.0 0.0 0.0 0.0248406642551619 0.0014921953792853438 31 0.0 0.0 0.0 0.05319237646158343 0.0015360834786760892 32 0.0 0.0 0.0 0.08277295545094583 0.00162385967745758 33 0.0 0.0 0.0 0.1094130317811283 0.00162385967745758 34 0.0 0.0 0.0 0.140836910944902 0.0017994120750205616 35 0.0 0.0 0.0 0.17348965689161658 0.0017994120750205616 36 0.0 0.0 0.0 0.22224933531473473 0.0017994120750205616 37 0.0 0.0 0.0 0.29870240445341323 0.0017994120750205616 38 0.0 0.0 0.0 0.3978456209771071 0.001843300174411307 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACC 1730 0.0 20.344873 4 TGTAGGA 2890 0.0 19.02932 2 GTCCTAC 2440 0.0 18.935106 1 GATATAC 1315 0.0 18.905622 1 CTGTAGG 2950 0.0 18.793896 1 GTATCGA 95 1.59944E-5 18.524542 9 GTATCAA 6395 0.0 18.405666 1 AGGACCT 2130 0.0 18.383215 5 GTAGGAC 2860 0.0 18.382854 3 TTAGGAC 1575 0.0 18.29666 3 CGTCGTA 400 0.0 18.148262 10 TCCTACA 2655 0.0 18.062302 2 ATACACT 1385 0.0 17.94774 4 TAGGACG 2805 0.0 17.802217 4 TAGGACA 870 0.0 17.699453 4 ACTGTTC 1395 0.0 17.503315 8 CCTACAG 2670 0.0 17.466492 3 AGGACGT 2855 0.0 17.336344 5 GTCCTAA 1435 0.0 17.324663 1 GGACGTG 2845 0.0 17.165316 6 >>END_MODULE