##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064061_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2447239 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.32696520446103 32.0 32.0 32.0 32.0 32.0 2 31.414049465540554 32.0 32.0 32.0 32.0 32.0 3 31.478758715434005 32.0 32.0 32.0 32.0 32.0 4 31.564457333345864 32.0 32.0 32.0 32.0 32.0 5 31.51241092512828 32.0 32.0 32.0 32.0 32.0 6 35.09387722245355 36.0 36.0 36.0 36.0 36.0 7 35.1143415089413 36.0 36.0 36.0 36.0 36.0 8 35.0632140955583 36.0 36.0 36.0 36.0 36.0 9 35.168202615273785 36.0 36.0 36.0 36.0 36.0 10 35.02617235178093 36.0 36.0 36.0 36.0 36.0 11 35.17008187594264 36.0 36.0 36.0 36.0 36.0 12 35.073274821135165 36.0 36.0 36.0 36.0 36.0 13 35.11694280779278 36.0 36.0 36.0 36.0 36.0 14 35.05827996366518 36.0 36.0 36.0 36.0 36.0 15 35.03832032752012 36.0 36.0 36.0 36.0 36.0 16 35.04724181005615 36.0 36.0 36.0 36.0 36.0 17 35.0113854838044 36.0 36.0 36.0 36.0 36.0 18 35.00275248964241 36.0 36.0 36.0 36.0 36.0 19 35.00648036419818 36.0 36.0 36.0 36.0 36.0 20 34.99481905935628 36.0 36.0 36.0 36.0 36.0 21 34.99221612600976 36.0 36.0 36.0 36.0 36.0 22 34.98034111094176 36.0 36.0 36.0 36.0 36.0 23 34.92898650274861 36.0 36.0 36.0 32.0 36.0 24 34.9025371040589 36.0 36.0 36.0 32.0 36.0 25 34.87224255579451 36.0 36.0 36.0 32.0 36.0 26 34.81681928083036 36.0 36.0 36.0 32.0 36.0 27 34.81736724529153 36.0 36.0 36.0 32.0 36.0 28 34.793428839602505 36.0 36.0 36.0 32.0 36.0 29 34.766157698532915 36.0 36.0 36.0 32.0 36.0 30 34.750810198758685 36.0 36.0 36.0 32.0 36.0 31 34.74842751361841 36.0 36.0 36.0 32.0 36.0 32 34.70588038193245 36.0 36.0 36.0 32.0 36.0 33 34.67635568083052 36.0 36.0 36.0 32.0 36.0 34 34.67362157925728 36.0 36.0 36.0 32.0 36.0 35 34.635319639806326 36.0 36.0 36.0 32.0 36.0 36 34.61049043432211 36.0 36.0 36.0 32.0 36.0 37 34.60137036063907 36.0 36.0 36.0 32.0 36.0 38 34.5665646060724 36.0 36.0 36.0 32.0 36.0 39 34.56506577412341 36.0 36.0 36.0 32.0 36.0 40 34.5455139444901 36.0 36.0 36.0 32.0 36.0 41 34.523342427936136 36.0 36.0 36.0 32.0 36.0 42 34.46560429937575 36.0 36.0 36.0 32.0 36.0 43 34.45127345551456 36.0 36.0 36.0 32.0 36.0 44 34.38734140801123 36.0 36.0 36.0 32.0 36.0 45 34.35631256285144 36.0 36.0 36.0 32.0 36.0 46 34.332258108014784 36.0 36.0 36.0 32.0 36.0 47 34.29875014250754 36.0 36.0 36.0 32.0 36.0 48 34.25077812179358 36.0 36.0 36.0 32.0 36.0 49 34.23676477859335 36.0 36.0 36.0 32.0 36.0 50 33.63254018099581 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 5.0 20 32.0 21 65.0 22 253.0 23 739.0 24 1899.0 25 4221.0 26 8857.0 27 16123.0 28 27241.0 29 41932.0 30 60954.0 31 87106.0 32 126340.0 33 203570.0 34 425298.0 35 1442603.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.39631304390469 17.689992460170696 11.776232578192525 26.137461917732086 2 16.217301833254876 20.328354647209583 36.724348161514726 26.72999535802082 3 17.91508596665288 24.28940008859003 28.874751351324846 28.920762593432244 4 12.254463090854632 15.920798908484215 35.76720540985167 36.05753259080948 5 14.387029628082912 36.852959600594794 33.171709015752036 15.588301755570258 6 34.48833987814795 35.67041103615108 16.5843422972095 13.256906788491479 7 30.572817660413627 30.53367145628783 20.46390295010371 18.429607933194838 8 28.612080797993166 32.64033467920379 18.911679652048697 19.835904870754348 9 27.70820206160965 13.79679096311152 18.05571560149623 40.439291373782595 10 15.810457898261813 26.64143514044401 31.40875521973453 26.13935174155965 11 37.548713099712046 20.929480879865743 22.315452079222407 19.20635394119981 12 25.02475240444632 23.492698091766346 28.605484470854275 22.877065032933057 13 29.65908705500071 19.410695306475954 25.138330262505704 25.79188737601763 14 23.89019240560537 19.431634021541125 25.144469697526915 31.533703875326598 15 25.390182675738 27.064720490142914 22.14657783854755 25.398518995571536 16 26.047819040824184 25.654516583266112 23.4246040210426 24.873060354867103 17 24.18656289802508 25.800422435242325 24.96065974757676 25.052354919155835 18 24.9879762164044 24.81226756912807 25.922419320105604 24.277336894361916 19 25.740702678163167 24.658543492109672 25.41784878211632 24.182905047610838 20 26.15073242171538 23.961476350346352 24.81881511459515 25.068976113343115 21 27.258392008299964 23.882751133011528 24.37273188274623 24.486124975942275 22 26.2847555364501 23.86692578893086 24.903115187909954 24.945203486709087 23 24.70439976070846 23.894829406707355 25.473516114585344 25.927254717998842 24 25.026049860454474 24.65898178757207 25.179978996661532 25.134989355311927 25 25.13139474159511 24.19988345893235 25.347110132943445 25.321611666529094 26 25.011115088569273 24.982673538406715 25.454329245269143 24.55188212775487 27 25.480829348386635 24.590397061696045 24.75270991358843 25.176063676328887 28 24.809165296361797 24.43113278172433 25.561470841111106 25.198231080802763 29 24.839539993535425 24.689571642169795 25.40026634706109 25.07062201723369 30 24.769763443865678 24.85202216286082 25.555859309394535 24.822355083878968 31 25.348315653628717 24.57068925920144 24.684826130273773 25.396168956896066 32 25.20806695410084 24.607618027197958 24.516451458808117 25.667863559893085 33 24.716791615348217 24.324782664483983 25.180843908271623 25.777581811896184 34 25.469145675335625 24.457647044881803 25.201733764145473 24.8714735156371 35 25.862292305925745 24.28156780344962 25.254201896150203 24.601937994474433 36 24.936822145758583 24.927668304005625 24.848798149616275 25.28671140061952 37 25.73417577720514 24.704903549657033 24.782912152261023 24.778008520876803 38 24.96333356626582 24.578954100449476 25.189645864978438 25.268066468306266 39 25.574658510781322 24.491438813084123 24.606674951137016 25.327227724997535 40 25.734434788009747 24.677589134958165 25.083074941524718 24.504901135507364 41 24.924575804024176 25.09460970864582 25.282623646440626 24.698190840889374 42 25.946153132622236 25.0027071766538 24.77734748992624 24.27379220079773 43 25.317915390373948 24.242642179281397 25.045889329484567 25.39355310086009 44 25.059557521328337 24.82990862262148 24.5984617610066 25.512072095043585 45 25.03764495606624 25.086639585453945 24.71119116609261 25.164524292387195 46 25.005679932919584 24.794950335320358 24.838877874086922 25.36049185767314 47 25.13402133471724 24.663521556400518 25.143665068231456 25.05879204065079 48 25.898314559450537 25.2239912324074 24.146389701838107 24.731304506303957 49 25.063622901302367 25.253715217846125 24.399239630733824 25.28342225011768 50 25.1428765234646 25.390586371953788 24.501576892618477 24.964960211963135 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 20.0 1 31.5 2 43.0 3 117.0 4 191.0 5 237.5 6 284.0 7 286.0 8 288.0 9 430.0 10 572.0 11 877.0 12 1182.0 13 2283.5 14 3385.0 15 4627.0 16 5869.0 17 6372.5 18 6876.0 19 6833.5 20 6791.0 21 7247.0 22 7703.0 23 8856.5 24 10010.0 25 11278.5 26 12547.0 27 15175.0 28 17803.0 29 21461.5 30 25120.0 31 29588.5 32 34057.0 33 39537.0 34 45017.0 35 52845.0 36 60673.0 37 72391.5 38 84110.0 39 93381.5 40 102653.0 41 114258.0 42 125863.0 43 131043.0 44 136223.0 45 149141.5 46 162060.0 47 173616.0 48 185172.0 49 191309.5 50 197447.0 51 192251.0 52 187055.0 53 185080.0 54 183105.0 55 182318.0 56 181531.0 57 175825.5 58 170120.0 59 154407.0 60 138694.0 61 121925.5 62 105157.0 63 91557.5 64 77958.0 65 65919.5 66 53881.0 67 46455.5 68 39030.0 69 35021.0 70 31012.0 71 23849.5 72 16687.0 73 14255.5 74 11824.0 75 9273.5 76 6723.0 77 5779.5 78 4836.0 79 4034.5 80 3233.0 81 2596.0 82 1959.0 83 1621.0 84 1283.0 85 932.0 86 581.0 87 417.0 88 253.0 89 193.5 90 134.0 91 113.0 92 92.0 93 62.0 94 32.0 95 35.5 96 39.0 97 36.5 98 34.0 99 30.5 100 27.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009561795966801772 2 2.860366314855231E-4 3 4.494861351915362E-4 4 0.0 5 0.0 6 3.677613833385296E-4 7 1.2258712777950988E-4 8 0.0 9 0.0010215593981625823 10 0.0014710455333541185 11 8.172475185300659E-5 12 8.172475185300659E-5 13 6.537980148240527E-4 14 5.312108870445429E-4 15 0.0047400356074743825 16 5.312108870445429E-4 17 0.0 18 2.4517425555901977E-4 19 8.172475185300659E-5 20 6.129356388975494E-4 21 0.0 22 1.2258712777950988E-4 23 6.129356388975494E-4 24 3.677613833385296E-4 25 0.001348458405574609 26 0.004699173231547879 27 0.004617448479694872 28 0.0038819257130178132 29 0.0022882930518841847 30 0.00335071482597327 31 0.007232640538991084 32 0.002860366314855231 33 0.004127099968576833 34 0.003187265322267257 35 0.002860366314855231 36 0.00731436529084409 37 0.0029829534426347405 38 0.007273502914917587 39 0.0036776138333852967 40 0.002083981172251668 41 0.003268990074120264 42 0.001634495037060132 43 0.0019205316685456549 44 0.0010215593981625823 45 0.0013075960296481054 46 0.001103284150015589 47 0.002206568300031178 48 0.0018388069166926483 49 2.860366314855231E-4 50 8.581098944565692E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2447239.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.92615877466349 #Duplication Level Percentage of deduplicated Percentage of total 1 76.08979346532006 40.271404900768815 2 13.808585030321243 14.61670727536447 3 4.5009125348627945 7.146480343530641 4 1.9243142823540635 4.0738625296089515 5 0.974906339595448 2.5799023859927344 6 0.6057325159349073 1.923545718800837 7 0.3910488991054316 1.4487701285898005 8 0.2711491420580516 1.1480706035342578 9 0.20161117778867607 0.960345468575134 >10 1.0920641216392448 10.16472309491403 >50 0.06822229786150207 2.502138358439616 >100 0.058766906938034214 6.646094591689977 >500 0.008854425476877297 3.288472260429298 >1k 0.004038860743837916 3.2294823397613115 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2552 0.1042807833644364 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2528 0.10330008634220032 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.0431187963251647E-4 2 0.0 0.0 0.0 0.0 2.0431187963251647E-4 3 0.0 0.0 0.0 0.0 2.0431187963251647E-4 4 0.0 0.0 0.0 0.0 2.0431187963251647E-4 5 0.0 0.0 0.0 0.0 2.4517425555901977E-4 6 0.0 0.0 0.0 0.0 2.4517425555901977E-4 7 0.0 4.0862375926503295E-5 0.0 0.0 2.4517425555901977E-4 8 0.0 4.0862375926503295E-5 0.0 4.0862375926503295E-5 2.4517425555901977E-4 9 0.0 4.0862375926503295E-5 0.0 4.0862375926503295E-5 2.4517425555901977E-4 10 0.0 4.0862375926503295E-5 0.0 2.860366314855231E-4 2.4517425555901977E-4 11 0.0 4.0862375926503295E-5 0.0 2.860366314855231E-4 2.4517425555901977E-4 12 0.0 4.0862375926503295E-5 0.0 2.860366314855231E-4 5.720732629710462E-4 13 0.0 4.0862375926503295E-5 0.0 2.860366314855231E-4 6.537980148240527E-4 14 0.0 4.0862375926503295E-5 0.0 2.860366314855231E-4 6.94660390750556E-4 15 0.0 4.0862375926503295E-5 0.0 2.860366314855231E-4 8.581098944565693E-4 16 0.0 4.0862375926503295E-5 0.0 2.860366314855231E-4 8.989722703830725E-4 17 0.0 4.0862375926503295E-5 0.0 3.2689900741202636E-4 8.989722703830725E-4 18 0.0 4.0862375926503295E-5 0.0 3.677613833385297E-4 8.989722703830725E-4 19 0.0 4.0862375926503295E-5 0.0 3.677613833385297E-4 8.989722703830725E-4 20 0.0 4.0862375926503295E-5 0.0 3.677613833385297E-4 0.0011850089018685956 21 0.0 4.0862375926503295E-5 0.0 4.0862375926503295E-4 0.0013075960296481054 22 0.0 4.0862375926503295E-5 0.0 4.903485111180395E-4 0.001389320781501112 23 0.0 4.0862375926503295E-5 0.0 8.581098944565693E-4 0.0014301831574276155 24 0.0 4.0862375926503295E-5 0.0 0.0011441465259420924 0.0014710455333541187 25 0.0 4.0862375926503295E-5 0.0 0.0012667336537216022 0.0014710455333541187 26 0.0 4.0862375926503295E-5 0.0 0.001511907909280622 0.0016344950370601318 27 0.0 4.0862375926503295E-5 0.0 0.0017570821648396418 0.0016344950370601318 28 0.0 4.0862375926503295E-5 0.0 0.0023291554278106878 0.0016344950370601318 29 0.0 4.0862375926503295E-5 0.0 0.0037593385852383032 0.0016344950370601318 30 0.0 4.0862375926503295E-5 0.0 0.0076821266741826195 0.0016344950370601318 31 0.0 4.0862375926503295E-5 0.0 0.01785685827988194 0.001675357412986635 32 0.0 4.0862375926503295E-5 0.0 0.02925746116337636 0.0017570821648396418 33 0.0 4.0862375926503295E-5 0.0 0.03930960564129617 0.0017570821648396418 34 0.0 4.0862375926503295E-5 0.0 0.0520178045544387 0.0018388069166926483 35 0.0 8.172475185300659E-5 0.0 0.06754550740650996 0.0018388069166926483 36 0.0 8.172475185300659E-5 0.0 0.09210379533833843 0.0018796692926191516 37 4.0862375926503295E-5 8.172475185300659E-5 0.0 0.1275723376425433 0.0018796692926191516 38 4.0862375926503295E-5 8.172475185300659E-5 0.0 0.17824168379140737 0.001961394044472158 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4965 0.0 21.535244 1 TAACGGC 160 1.8189894E-12 20.627586 36 ACCGCGT 55 0.0044874824 19.998013 8 AACGCAG 6230 0.0 17.160412 6 TAGGACG 195 4.9112714E-11 16.921396 4 GTAAACG 575 0.0 16.452892 27 TAAACGC 590 0.0 16.407162 28 CGCAATA 695 0.0 16.14591 36 TTAACGG 205 1.05501385E-10 16.099579 35 GGTATCA 2615 0.0 16.069206 1 TCTAGAT 585 0.0 15.793625 2 CTAGCGG 720 0.0 15.584332 29 TAATACT 470 0.0 15.445273 4 TACGACG 660 0.0 15.331809 5 TATCAAC 7140 0.0 15.312516 2 CAATACG 750 0.0 15.254 38 TCAACGC 7060 0.0 15.236446 4 GCATTCG 905 0.0 15.072174 22 TCTAGCG 765 0.0 14.954595 28 ATCAACG 7215 0.0 14.939916 3 >>END_MODULE