##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064056_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1695212 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.299186178483872 32.0 32.0 32.0 32.0 32.0 2 31.40453819345309 32.0 32.0 32.0 32.0 32.0 3 31.484885666217558 32.0 32.0 32.0 32.0 32.0 4 31.572311899632613 32.0 32.0 32.0 32.0 32.0 5 31.517414930993883 32.0 32.0 32.0 32.0 32.0 6 35.11257176093609 36.0 36.0 36.0 36.0 36.0 7 35.134553672343046 36.0 36.0 36.0 36.0 36.0 8 35.08191541824857 36.0 36.0 36.0 36.0 36.0 9 35.190010452969894 36.0 36.0 36.0 36.0 36.0 10 35.04418562398095 36.0 36.0 36.0 36.0 36.0 11 35.190352593068006 36.0 36.0 36.0 36.0 36.0 12 35.09157615684646 36.0 36.0 36.0 36.0 36.0 13 35.13401155725656 36.0 36.0 36.0 36.0 36.0 14 35.081475945191514 36.0 36.0 36.0 36.0 36.0 15 35.04903988409709 36.0 36.0 36.0 36.0 36.0 16 35.06615809704037 36.0 36.0 36.0 36.0 36.0 17 35.02817405728605 36.0 36.0 36.0 36.0 36.0 18 35.02480043793933 36.0 36.0 36.0 36.0 36.0 19 35.01763614226421 36.0 36.0 36.0 36.0 36.0 20 35.0186867483241 36.0 36.0 36.0 36.0 36.0 21 35.012720532889105 36.0 36.0 36.0 36.0 36.0 22 34.99724990148725 36.0 36.0 36.0 36.0 36.0 23 34.94391910864246 36.0 36.0 36.0 36.0 36.0 24 34.91685995615887 36.0 36.0 36.0 32.0 36.0 25 34.88053883526072 36.0 36.0 36.0 32.0 36.0 26 34.833393109534384 36.0 36.0 36.0 32.0 36.0 27 34.82550678027291 36.0 36.0 36.0 32.0 36.0 28 34.802229455666904 36.0 36.0 36.0 32.0 36.0 29 34.776150121636704 36.0 36.0 36.0 32.0 36.0 30 34.75220857332298 36.0 36.0 36.0 32.0 36.0 31 34.75113791077458 36.0 36.0 36.0 32.0 36.0 32 34.707841261152 36.0 36.0 36.0 32.0 36.0 33 34.68511136070297 36.0 36.0 36.0 32.0 36.0 34 34.67360601505889 36.0 36.0 36.0 32.0 36.0 35 34.63384756596815 36.0 36.0 36.0 32.0 36.0 36 34.60833335299656 36.0 36.0 36.0 32.0 36.0 37 34.59455808477052 36.0 36.0 36.0 32.0 36.0 38 34.55025507134211 36.0 36.0 36.0 32.0 36.0 39 34.54829012536485 36.0 36.0 36.0 32.0 36.0 40 34.52330504975189 36.0 36.0 36.0 32.0 36.0 41 34.51176431030455 36.0 36.0 36.0 32.0 36.0 42 34.450281734673894 36.0 36.0 36.0 32.0 36.0 43 34.44199840491927 36.0 36.0 36.0 32.0 36.0 44 34.37646028933254 36.0 36.0 36.0 32.0 36.0 45 34.33760438222476 36.0 36.0 36.0 32.0 36.0 46 34.319951132955644 36.0 36.0 36.0 32.0 36.0 47 34.286141202398284 36.0 36.0 36.0 32.0 36.0 48 34.23938657819789 36.0 36.0 36.0 32.0 36.0 49 34.22087679889005 36.0 36.0 36.0 32.0 36.0 50 33.63092285802602 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 3.0 18 0.0 19 3.0 20 8.0 21 67.0 22 179.0 23 513.0 24 1379.0 25 3135.0 26 6181.0 27 11466.0 28 18969.0 29 29273.0 30 42128.0 31 59766.0 32 86468.0 33 138687.0 34 291151.0 35 1005836.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.53925624222745 18.022580805017853 11.961467032591024 26.476695920163674 2 15.753697789407989 20.33728133874311 37.36439669136775 26.544624180481147 3 17.92832257554539 24.429951286156374 29.019776947462432 28.621949190835807 4 12.0264014176398 16.05893540158989 36.324542299134265 35.59012088163605 5 14.051752819116428 37.12786365363152 33.677793691880424 15.142589835371624 6 34.186560957049565 36.0846738752131 16.660590723273224 13.068174444464109 7 30.026468681479766 30.56451379798739 20.94948652409641 18.45953099643643 8 28.006644596664014 33.420775690592095 19.199840491926672 19.37273922081722 9 27.53752540283214 13.68405218309506 18.356698531428723 40.42172388264408 10 15.554961718132903 27.138271897705803 32.03389120623128 25.27287517793001 11 37.362406589854245 20.874616272183065 22.628379223365574 19.134597914597112 12 24.558963196300162 23.583036909881372 29.20953746143546 22.64846243238301 13 29.630628090339677 19.49685052282855 25.283653511498926 25.58886787533285 14 23.421300854348935 19.65061535185337 25.357463298035814 31.57062049576188 15 24.975252810678988 27.525127688417843 22.218020673194342 25.28159882770883 16 25.474737214053082 25.664036300120163 24.067706425373746 24.79352006045301 17 23.882572729884362 25.998061598231725 25.352891174019042 24.76647449786487 18 24.68347523340807 25.0396559240258 26.36893311554282 23.907935727023307 19 25.616737021682244 24.841199802738537 25.406320861343595 24.13574231423562 20 25.838812548888214 24.347006891246668 25.083500767463786 24.730679792401343 21 26.73594807021187 24.14771721766953 24.515163885106993 24.601170827011607 22 25.774623792922412 24.46923979919892 25.000619392287682 24.75551701559099 23 24.448782179812305 24.28302012563702 25.58959085087845 25.678606843672224 24 24.939741836685336 24.88971841770263 25.29757445407815 24.87296529153389 25 24.942631528650022 24.57624019131869 25.52681658960513 24.954311690426163 26 24.63776836643134 25.29123358446644 25.72205930328113 24.348938745821087 27 25.139446297173556 24.88878217588728 24.93874981785703 25.03302170908214 28 24.42052394121589 24.86768148225056 25.694450999084452 25.017343577449104 29 24.681285088725772 24.757324794548268 25.42976591686837 25.131624199857594 30 24.490621801546173 25.0834879406308 25.71363680607378 24.71225345174925 31 25.205002654710633 24.70332133797416 24.864255796118222 25.22742021119698 32 24.786583441435287 24.964029922856795 24.84303832265882 25.406348313049097 33 24.32355104802615 24.65673906387618 25.491950807573893 25.527759080523783 34 25.13657914157333 24.73089735489812 25.493239325118232 24.63928417841032 35 25.507220215541675 24.693320024941436 25.472474458328982 24.326985301187904 36 24.615668694291205 25.11853373897623 25.227908656015885 25.037888910716678 37 25.375735262452785 24.943618326005534 24.94609599308141 24.734550418460273 38 24.65658064344856 24.923941867221995 25.293303875616857 25.126173613712588 39 25.23303343729703 24.7090658428227 24.832182299664392 25.225718420215877 40 25.558349103573907 24.872874556978157 25.27542862805986 24.29334771138808 41 24.567575906127647 25.062457489088008 25.606597162616 24.763369442168347 42 25.624316073561726 25.29827303965667 25.050864954945656 24.026545931835948 43 24.820904819996368 24.6255282599924 25.329285011455955 25.224281908555273 44 24.47724179753196 25.179227591463142 24.950934732428383 25.39259587857651 45 24.71088752397964 25.24628536775862 25.113497735944335 24.929329372317408 46 24.68328146125876 24.838956675216316 25.19036146852635 25.28740039499857 47 24.98426416151725 24.820682230448185 25.424159747518694 24.770893860515876 48 25.323742195500643 25.267110907657965 24.703393629923973 24.70575326691742 49 24.67685305131418 25.347037878627 24.845446329763263 25.130662740295563 50 24.64079141804582 25.659795243586984 24.75694393237316 24.942469405994036 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 19.0 1 22.0 2 25.0 3 104.5 4 184.0 5 201.0 6 218.0 7 222.0 8 226.0 9 315.0 10 404.0 11 649.0 12 894.0 13 1583.0 14 2272.0 15 3081.5 16 3891.0 17 4272.5 18 4654.0 19 4826.0 20 4998.0 21 5678.5 22 6359.0 23 7291.0 24 8223.0 25 9476.0 26 10729.0 27 13570.5 28 16412.0 29 19484.0 30 22556.0 31 25689.5 32 28823.0 33 33476.0 34 38129.0 35 43438.5 36 48748.0 37 56577.5 38 64407.0 39 69244.5 40 74082.0 41 80710.5 42 87339.0 43 89879.0 44 92419.0 45 100860.5 46 109302.0 47 116095.0 48 122888.0 49 126807.0 50 130726.0 51 127711.0 52 124696.0 53 123593.0 54 122490.0 55 122074.0 56 121658.0 57 117615.5 58 113573.0 59 103572.0 60 93571.0 61 82748.0 62 71925.0 63 62325.5 64 52726.0 65 44825.5 66 36925.0 67 31640.0 68 26355.0 69 23583.0 70 20811.0 71 16041.0 72 11271.0 73 9438.0 74 7605.0 75 6006.0 76 4407.0 77 3798.5 78 3190.0 79 2633.5 80 2077.0 81 1714.0 82 1351.0 83 1115.5 84 880.0 85 619.0 86 358.0 87 261.5 88 165.0 89 126.5 90 88.0 91 72.0 92 56.0 93 48.0 94 40.0 95 36.0 96 32.0 97 26.0 98 20.0 99 17.5 100 15.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008494512780702354 2 5.898967208821079E-4 3 3.539380325292648E-4 4 0.0 5 0.0 6 1.1797934417642159E-4 7 5.8989672088210796E-5 8 0.0 9 0.0015927211463816916 10 0.0013567624580288484 11 0.0 12 1.1797934417642159E-4 13 5.898967208821079E-4 14 1.769690162646324E-4 15 0.004129277046174756 16 6.488863929703188E-4 17 5.8989672088210796E-5 18 2.9494836044105397E-4 19 0.0 20 0.0010618140975877943 21 0.0 22 1.1797934417642159E-4 23 6.488863929703188E-4 24 3.539380325292648E-4 25 0.001769690162646324 26 0.005604018848380026 27 0.006783812290144241 28 0.003539380325292648 29 0.0026545352439694856 30 0.003362411309028015 31 0.006606843273879609 32 0.003126452620675172 33 0.004306246062439388 34 0.0024185765556166425 35 0.0024185765556166425 36 0.007373709011026349 37 0.004070287374086545 38 0.007491688355202771 39 0.004070287374086545 40 0.0021236281951755886 41 0.003480390653204437 42 0.0021826178672637994 43 0.0014157521301170592 44 0.0012387831138524269 45 0.0014157521301170592 46 9.438347534113727E-4 47 0.0021826178672637994 48 0.0021236281951755886 49 4.7191737670568637E-4 50 0.0015927211463816916 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1695212.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.83651859102932 #Duplication Level Percentage of deduplicated Percentage of total 1 77.20281857926248 43.87939433460115 2 13.65580932280561 15.52297320902385 3 4.24363204717169 7.235798152276847 4 1.7835214156276116 4.054765923872707 5 0.8754711056418076 2.487936488585979 6 0.5270677105248207 1.797401623678514 7 0.3362340656664747 1.3377261606932969 8 0.23314374969421295 1.0600863251101935 9 0.17232671632439467 0.8815005554492245 >10 0.842439958555235 8.47813513845966 >50 0.06143201099370739 2.4769588244872898 >100 0.05701845471738315 6.673659760793899 >500 0.006891965045572947 2.5812257709101933 >1k 0.0021928979690459378 1.5324377320572344 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.8989672088210796E-5 2 0.0 0.0 0.0 0.0 5.8989672088210796E-5 3 0.0 0.0 0.0 0.0 5.8989672088210796E-5 4 0.0 0.0 0.0 0.0 5.8989672088210796E-5 5 0.0 0.0 0.0 0.0 5.8989672088210796E-5 6 0.0 0.0 0.0 0.0 1.1797934417642159E-4 7 0.0 0.0 0.0 0.0 1.1797934417642159E-4 8 0.0 0.0 0.0 0.0 1.1797934417642159E-4 9 0.0 0.0 0.0 0.0 1.1797934417642159E-4 10 0.0 0.0 0.0 0.0 1.1797934417642159E-4 11 0.0 0.0 0.0 0.0 1.1797934417642159E-4 12 0.0 0.0 0.0 0.0 2.3595868835284318E-4 13 0.0 0.0 0.0 0.0 3.539380325292648E-4 14 0.0 0.0 0.0 0.0 3.539380325292648E-4 15 0.0 0.0 0.0 0.0 4.129277046174756E-4 16 0.0 0.0 0.0 5.8989672088210796E-5 4.129277046174756E-4 17 0.0 0.0 0.0 5.8989672088210796E-5 4.129277046174756E-4 18 0.0 0.0 0.0 5.8989672088210796E-5 4.129277046174756E-4 19 0.0 0.0 0.0 5.8989672088210796E-5 4.129277046174756E-4 20 0.0 0.0 0.0 1.1797934417642159E-4 4.7191737670568637E-4 21 0.0 0.0 0.0 1.769690162646324E-4 4.7191737670568637E-4 22 0.0 0.0 0.0 4.129277046174756E-4 5.309070487938971E-4 23 0.0 0.0 0.0 7.078760650585296E-4 5.309070487938971E-4 24 0.0 0.0 0.0 0.0014157521301170592 5.309070487938971E-4 25 0.0 0.0 0.0 0.0018876695068227455 5.309070487938971E-4 26 0.0 0.0 0.0 0.002300597211440221 5.898967208821079E-4 27 0.0 0.0 0.0 0.0030084732764987508 5.898967208821079E-4 28 0.0 0.0 0.0 0.00595795688090929 5.898967208821079E-4 29 0.0 0.0 0.0 0.013095707203582796 5.898967208821079E-4 30 0.0 0.0 0.0 0.02518858998166601 5.898967208821079E-4 31 0.0 0.0 0.0 0.04961031422618528 6.488863929703187E-4 32 0.0 0.0 0.0 0.07556576994499803 6.488863929703187E-4 33 0.0 0.0 0.0 0.10110829795919331 6.488863929703187E-4 34 0.0 0.0 0.0 0.12641486728503573 7.668657371467404E-4 35 0.0 0.0 0.0 0.15779737283596387 7.668657371467404E-4 36 0.0 0.0 0.0 0.20321942034388618 7.668657371467404E-4 37 0.0 0.0 0.0 0.269759770459388 7.668657371467404E-4 38 0.0 0.0 0.0 0.36756464678164147 8.84845081323162E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCCTAC 595 0.0 19.596508 1 GTATCAA 3015 0.0 19.044647 1 TATACTG 255 0.0 18.979706 5 TAGGACG 325 0.0 18.953161 4 TACGACG 430 0.0 18.417938 5 CGACGGT 435 0.0 18.206238 7 GACGGTA 465 0.0 17.504742 8 ATTATAC 240 0.0 17.416037 3 ACGACGG 455 0.0 17.405962 6 ATCGTTT 395 0.0 17.266216 29 CTACGAC 465 0.0 17.031641 4 CGAGCCG 545 0.0 16.954515 15 CGCAATA 535 0.0 16.860693 36 ACGGTAT 480 0.0 16.500864 9 GTCCTAT 510 0.0 16.392046 1 TTAACGG 135 1.0854837E-6 16.297148 35 ATACGAA 560 0.0 16.107037 40 GTATTAC 205 1.05501385E-10 16.097452 1 GTATAAA 315 0.0 16.063385 1 CGTTTAT 440 0.0 16.000837 31 >>END_MODULE