##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064054_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1041343 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.278199402118226 32.0 32.0 32.0 32.0 32.0 2 31.37764502186119 32.0 32.0 32.0 32.0 32.0 3 31.467899625771718 32.0 32.0 32.0 32.0 32.0 4 31.54779549101497 32.0 32.0 32.0 32.0 32.0 5 31.498237372316325 32.0 32.0 32.0 32.0 32.0 6 35.07086713983769 36.0 36.0 36.0 36.0 36.0 7 35.090679055796215 36.0 36.0 36.0 36.0 36.0 8 35.041166071121616 36.0 36.0 36.0 36.0 36.0 9 35.14881263906321 36.0 36.0 36.0 36.0 36.0 10 34.99720073021089 36.0 36.0 36.0 36.0 36.0 11 35.149042150376964 36.0 36.0 36.0 36.0 36.0 12 35.05388810411171 36.0 36.0 36.0 36.0 36.0 13 35.08599856147302 36.0 36.0 36.0 36.0 36.0 14 35.03717026954615 36.0 36.0 36.0 36.0 36.0 15 35.01023005868383 36.0 36.0 36.0 36.0 36.0 16 35.0259683888978 36.0 36.0 36.0 36.0 36.0 17 34.990181909322864 36.0 36.0 36.0 36.0 36.0 18 34.98339259974859 36.0 36.0 36.0 36.0 36.0 19 34.97860743290155 36.0 36.0 36.0 36.0 36.0 20 34.96722981764894 36.0 36.0 36.0 36.0 36.0 21 34.96905822577191 36.0 36.0 36.0 36.0 36.0 22 34.945408957471265 36.0 36.0 36.0 36.0 36.0 23 34.89885081092397 36.0 36.0 36.0 32.0 36.0 24 34.87352390134663 36.0 36.0 36.0 32.0 36.0 25 34.849954337811845 36.0 36.0 36.0 32.0 36.0 26 34.78623181795047 36.0 36.0 36.0 32.0 36.0 27 34.7718791983045 36.0 36.0 36.0 32.0 36.0 28 34.74631125383279 36.0 36.0 36.0 32.0 36.0 29 34.72059158221643 36.0 36.0 36.0 32.0 36.0 30 34.692643058051 36.0 36.0 36.0 32.0 36.0 31 34.69302525680779 36.0 36.0 36.0 32.0 36.0 32 34.64863834490653 36.0 36.0 36.0 32.0 36.0 33 34.618710645771856 36.0 36.0 36.0 32.0 36.0 34 34.608708177805006 36.0 36.0 36.0 32.0 36.0 35 34.56624186267157 36.0 36.0 36.0 32.0 36.0 36 34.53721588371939 36.0 36.0 36.0 32.0 36.0 37 34.51781017397726 36.0 36.0 36.0 32.0 36.0 38 34.48408257413744 36.0 36.0 36.0 32.0 36.0 39 34.454035798003154 36.0 36.0 36.0 32.0 36.0 40 34.45216513675129 36.0 36.0 36.0 32.0 36.0 41 34.429211124480595 36.0 36.0 36.0 32.0 36.0 42 34.36970911601653 36.0 36.0 36.0 32.0 36.0 43 34.35806261721642 36.0 36.0 36.0 32.0 36.0 44 34.28655975984858 36.0 36.0 36.0 32.0 36.0 45 34.244177950972926 36.0 36.0 36.0 32.0 36.0 46 34.21242952610235 36.0 36.0 36.0 32.0 36.0 47 34.16503976115459 36.0 36.0 36.0 32.0 36.0 48 34.11775754962582 36.0 36.0 36.0 32.0 36.0 49 34.09715050660541 36.0 36.0 36.0 32.0 36.0 50 33.498575397347466 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 6.0 20 10.0 21 36.0 22 144.0 23 340.0 24 925.0 25 2039.0 26 4204.0 27 7570.0 28 12652.0 29 19386.0 30 27813.0 31 38822.0 32 55857.0 33 88209.0 34 181011.0 35 602318.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.906382651787254 18.450627124829534 12.336208055624915 26.306782167758293 2 15.35381917669304 20.776079213549504 37.881396704429015 25.988704905328436 3 17.830346948202166 24.922191375126403 29.274864909246478 27.972596767424957 4 12.198958460372806 16.564666973321952 36.46656289042131 34.76981167588393 5 13.789980822841274 37.47958165561203 33.85512746520599 14.875310056340707 6 33.479939308967296 36.30879443793574 16.96679278621776 13.244473466879214 7 29.35382482044821 30.975960850555484 21.298553886663665 18.37166044233264 8 27.550576515134782 33.87462152239944 19.62033643093582 18.95446553152996 9 27.501742956630633 14.029120339871742 18.663848486652697 39.80528821684493 10 15.687185859676145 27.531128341147028 32.256509438854394 24.525176360322433 11 36.64771035836449 21.061284381115904 23.111715459474407 19.17928980104519 12 24.743167950586837 23.89445542386651 29.414063775397516 21.948312850149136 13 29.670357107531746 20.1004668028375 25.327294953900697 24.901881135730054 14 23.15792809463951 20.042426064084676 25.881723662085715 30.9179221791901 15 24.674900628735124 28.11695414468687 22.543520244464354 24.664624982113654 16 24.885603356467143 25.94069332288519 24.77151881290615 24.40218450774152 17 23.423118031234665 26.287784140288075 25.89819108593422 24.39090674254304 18 24.12048333923919 25.284945632498157 27.12680500778325 23.467766020479402 19 25.418714102846035 24.90783536260387 25.847391301425176 23.826059233124916 20 25.67209528556187 24.762972075215135 25.62772907417704 23.937203565045955 21 26.2607037258617 24.404062830402662 24.947015536667553 24.388217907068086 22 25.502092492187966 25.02453564727054 25.384647887053436 24.088723973488058 23 24.02749928937442 24.92941759432114 26.01244939193498 25.030633724369466 24 24.778242669788284 25.16966104282843 25.866262828410676 24.185833458972613 25 24.666986132064693 24.843972523414926 26.086238371763613 24.40280297275677 26 24.020616675613876 25.77209296518847 26.370195516535695 23.83709484266196 27 24.532473107540067 25.43367422885553 25.573502535828602 24.460350127775797 28 23.87332708470982 25.465381601389037 26.09104423718136 24.57024707671978 29 24.23495698703753 25.177900229901834 25.759569159734717 24.827573623325915 30 23.99381548242118 25.45485974397634 26.09357443988822 24.457750333714266 31 24.78331894395055 25.03061145113164 25.4905274965259 24.69554210839191 32 24.36550709495018 25.552864485299203 25.30884352696235 24.772784892788273 33 23.94326295622278 25.225608497111768 25.988312629946364 24.842815916719086 34 24.631475232254633 25.251269069656225 26.0751319966888 24.042123701400346 35 24.771586668382447 25.229853819309067 26.040080129528654 23.958479382779835 36 23.965968284700136 25.586882865440465 25.84445443230535 24.602694417554048 37 24.70536942141776 25.41313583737314 25.30135291903229 24.58014182217681 38 24.198238689292882 25.598355853909165 25.748941196807746 24.454464259990203 39 24.882046140534353 25.110895354543423 25.406872390874074 24.600186114048153 40 25.200587333155994 25.184165820782724 25.751236174959207 23.864010671102076 41 24.42440125726611 25.284762322734792 26.11592930807149 24.174907111927606 42 25.010083355740793 25.844024891483887 25.569949679253256 23.575942073522068 43 24.146451313657835 25.299112960457258 25.894890087570786 24.659545638314114 44 23.93964623984589 25.689720904192438 25.507069345172074 24.8635635107896 45 24.096111334115662 25.786731250492156 25.54089273950529 24.57626467588689 46 24.219798834955935 25.26787754937417 25.55731398379387 24.955009631876035 47 24.55044909475213 25.38285651727572 25.702355766783796 24.36433862118836 48 24.66453539124013 25.78244665169204 25.018606245744575 24.534411711323255 49 24.372588448367587 25.757436077676687 25.198061731880593 24.67191374207513 50 24.177128518240735 26.19686687031785 24.988692269353503 24.637312342087903 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 98.0 1 67.5 2 37.0 3 94.0 4 151.0 5 187.5 6 224.0 7 201.0 8 178.0 9 274.5 10 371.0 11 552.5 12 734.0 13 1285.5 14 1837.0 15 2500.0 16 3163.0 17 3442.0 18 3721.0 19 3790.0 20 3859.0 21 4314.0 22 4769.0 23 5378.5 24 5988.0 25 6851.5 26 7715.0 27 9528.5 28 11342.0 29 13699.5 30 16057.0 31 18562.5 32 21068.0 33 24975.0 34 28882.0 35 33475.5 36 38069.0 37 41566.0 38 45063.0 39 47105.0 40 49147.0 41 51918.0 42 54689.0 43 55805.0 44 56921.0 45 61345.0 46 65769.0 47 68842.5 48 71916.0 49 73808.0 50 75700.0 51 74800.5 52 73901.0 53 73009.5 54 72118.0 55 71394.0 56 70670.0 57 68158.5 58 65647.0 59 59779.5 60 53912.0 61 47701.5 62 41491.0 63 35851.0 64 30211.0 65 25801.0 66 21391.0 67 18154.0 68 14917.0 69 13316.5 70 11716.0 71 9049.5 72 6383.0 73 5417.0 74 4451.0 75 3492.0 76 2533.0 77 2200.0 78 1867.0 79 1516.5 80 1166.0 81 909.0 82 652.0 83 546.5 84 441.0 85 322.0 86 203.0 87 145.5 88 88.0 89 61.0 90 34.0 91 31.5 92 29.0 93 20.0 94 11.0 95 15.5 96 20.0 97 16.5 98 13.0 99 11.5 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007970476586484952 2 5.761790303483098E-4 3 5.761790303483098E-4 4 0.0 5 0.0 6 2.880895151741549E-4 7 0.0 8 0.0 9 8.642685455224647E-4 10 8.642685455224647E-4 11 9.602983839138497E-5 12 9.602983839138497E-5 13 3.841193535655399E-4 14 1.9205967678276995E-4 15 0.0044173725660037085 16 9.602983839138497E-4 17 0.0 18 3.841193535655399E-4 19 0.0 20 9.602983839138497E-4 21 0.0 22 9.602983839138497E-5 23 6.722088687396949E-4 24 1.9205967678276995E-4 25 0.0019205967678276993 26 0.004801491919569249 27 0.0063379693338314076 28 0.0045134024043950935 29 0.002784865313350164 30 0.0031689846669157038 31 0.0063379693338314076 32 0.003745163697264014 33 0.0046094322427864785 34 0.002784865313350164 35 0.002784865313350164 36 0.007586357232919413 37 0.003745163697264014 38 0.007010178202571103 39 0.0044173725660037085 40 0.002496775798176009 41 0.003457074182089859 42 0.0022086862830018542 43 0.0013444177374793897 44 0.0015364774142621596 45 8.642685455224647E-4 46 8.642685455224647E-4 47 0.002496775798176009 48 0.002496775798176009 49 9.602983839138497E-5 50 0.0019205967678276993 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1041343.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.267755684915514 #Duplication Level Percentage of deduplicated Percentage of total 1 80.31495105370624 50.81346701111834 2 12.357601102514707 15.636753748110863 3 3.4466242823321407 6.541805490968613 4 1.373649085209965 3.4763077887948706 5 0.7231724136386133 2.2876747792079226 6 0.4134551922012931 1.5695029252110722 7 0.2607435034666163 1.1547659391628358 8 0.19480842180020955 0.9860073308655702 9 0.13274211741243644 0.7558466268193559 >10 0.6751351206408681 7.539171124472807 >50 0.05754770822729311 2.636549958903562 >100 0.04696910468941463 5.59440696016539 >500 0.002600894160236838 1.007740316198804 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 1.9205967678276995E-4 13 0.0 0.0 0.0 0.0 1.9205967678276995E-4 14 0.0 0.0 0.0 9.602983839138497E-5 3.841193535655399E-4 15 0.0 0.0 0.0 9.602983839138497E-5 6.722088687396948E-4 16 0.0 0.0 0.0 1.9205967678276995E-4 6.722088687396948E-4 17 0.0 0.0 0.0 1.9205967678276995E-4 6.722088687396948E-4 18 0.0 0.0 0.0 1.9205967678276995E-4 6.722088687396948E-4 19 0.0 0.0 0.0 1.9205967678276995E-4 6.722088687396948E-4 20 0.0 0.0 0.0 3.841193535655399E-4 7.682387071310798E-4 21 0.0 0.0 0.0 3.841193535655399E-4 8.642685455224647E-4 22 0.0 0.0 0.0 7.682387071310798E-4 8.642685455224647E-4 23 0.0 0.0 0.0 0.0018245669294363145 9.602983839138497E-4 24 0.0 0.0 0.0 0.003072954828524319 0.0010563282223052346 25 0.0 0.0 0.0 0.004033253212438169 0.0010563282223052346 26 0.0 0.0 0.0 0.004705462081177864 0.0011523580606966196 27 0.0 0.0 0.0 0.005377670949917558 0.0011523580606966196 28 0.0 0.0 0.0 0.009987103192704037 0.0011523580606966196 29 0.0 0.0 0.0 0.018437728971145914 0.0011523580606966196 30 0.0 0.0 0.0 0.03265014505307089 0.0011523580606966196 31 0.0 0.0 0.0 0.06472411107579347 0.0011523580606966196 32 0.0 0.0 0.0 0.10006309160382314 0.0011523580606966196 33 0.0 0.0 0.0 0.13569016164702696 0.0011523580606966196 34 0.0 0.0 0.0 0.16949266476079447 0.0011523580606966196 35 0.0 0.0 0.0 0.20982519688517617 0.0011523580606966196 36 0.0 0.0 0.0 0.26801927895035543 0.0011523580606966196 37 0.0 0.0 0.0 0.3531977456035139 0.0011523580606966196 38 0.0 0.0 0.0 0.47640402825966083 0.0011523580606966196 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATAGG 120 5.984475E-10 22.000576 1 GTATCAA 2255 0.0 20.390778 1 TTAACGG 110 1.2642158E-7 20.001486 35 TATAGGA 200 0.0 18.698694 2 CGATTAA 60 0.00741031 18.333813 41 ACGATTA 60 0.0074123633 18.332932 40 CCGAAAT 60 0.0074144164 18.332052 12 GTCCTAT 305 0.0 18.03326 1 GGCGTTA 200 3.6379788E-12 17.601305 42 GTCCTAA 340 0.0 17.471046 1 GATATAC 270 0.0 17.111559 1 CTAGATA 180 2.8558134E-10 17.109917 3 GTATTAG 245 0.0 17.061672 1 GTATATA 155 1.4379111E-8 17.032703 1 AACGCAG 2685 0.0 16.877777 6 ATACCGT 185 4.2200554E-10 16.647486 6 GTCCTAC 645 0.0 16.031427 1 TAGGACG 675 0.0 15.969254 4 TAGGACA 280 0.0 15.713188 4 TACCGTC 210 1.5097612E-10 15.713188 7 >>END_MODULE