##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064053_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1439764 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.281014110645913 32.0 32.0 32.0 32.0 32.0 2 31.358082296820868 32.0 32.0 32.0 32.0 32.0 3 31.445526489063486 32.0 32.0 32.0 32.0 32.0 4 31.531325272753033 32.0 32.0 32.0 32.0 32.0 5 31.481504607699595 32.0 32.0 32.0 32.0 32.0 6 35.05067288805665 36.0 36.0 36.0 36.0 36.0 7 35.06992673799317 36.0 36.0 36.0 36.0 36.0 8 35.005632173050586 36.0 36.0 36.0 36.0 36.0 9 35.1429449548676 36.0 36.0 36.0 36.0 36.0 10 34.972312128932245 36.0 36.0 36.0 36.0 36.0 11 35.137528094882214 36.0 36.0 36.0 36.0 36.0 12 35.043890526502956 36.0 36.0 36.0 36.0 36.0 13 35.08189744985984 36.0 36.0 36.0 36.0 36.0 14 35.01920800909038 36.0 36.0 36.0 36.0 36.0 15 34.9951242009107 36.0 36.0 36.0 36.0 36.0 16 35.00578289219622 36.0 36.0 36.0 36.0 36.0 17 34.97298029399263 36.0 36.0 36.0 36.0 36.0 18 34.96931719365118 36.0 36.0 36.0 36.0 36.0 19 34.968448301249374 36.0 36.0 36.0 36.0 36.0 20 34.96468796274945 36.0 36.0 36.0 36.0 36.0 21 34.960251819048125 36.0 36.0 36.0 36.0 36.0 22 34.947455277392685 36.0 36.0 36.0 36.0 36.0 23 34.88504574360798 36.0 36.0 36.0 32.0 36.0 24 34.86344706493564 36.0 36.0 36.0 32.0 36.0 25 34.83855965283199 36.0 36.0 36.0 32.0 36.0 26 34.77835811980297 36.0 36.0 36.0 32.0 36.0 27 34.77188761491467 36.0 36.0 36.0 32.0 36.0 28 34.75041465129007 36.0 36.0 36.0 32.0 36.0 29 34.71473658182869 36.0 36.0 36.0 32.0 36.0 30 34.70600251152272 36.0 36.0 36.0 32.0 36.0 31 34.69079585265363 36.0 36.0 36.0 32.0 36.0 32 34.65089903623094 36.0 36.0 36.0 32.0 36.0 33 34.626315840651664 36.0 36.0 36.0 32.0 36.0 34 34.606388269188564 36.0 36.0 36.0 32.0 36.0 35 34.561982380445684 36.0 36.0 36.0 32.0 36.0 36 34.548726735770586 36.0 36.0 36.0 32.0 36.0 37 34.530811994187935 36.0 36.0 36.0 32.0 36.0 38 34.50770473494267 36.0 36.0 36.0 32.0 36.0 39 34.50693030246624 36.0 36.0 36.0 32.0 36.0 40 34.48259298051625 36.0 36.0 36.0 32.0 36.0 41 34.47635237441692 36.0 36.0 36.0 32.0 36.0 42 34.41289127940412 36.0 36.0 36.0 32.0 36.0 43 34.4037640891146 36.0 36.0 36.0 32.0 36.0 44 34.34898288886234 36.0 36.0 36.0 32.0 36.0 45 34.31924884911694 36.0 36.0 36.0 32.0 36.0 46 34.29651317854871 36.0 36.0 36.0 32.0 36.0 47 34.27033110982077 36.0 36.0 36.0 32.0 36.0 48 34.2319817692344 36.0 36.0 36.0 32.0 36.0 49 34.20481828966414 36.0 36.0 36.0 32.0 36.0 50 33.59537326950806 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 2.0 19 1.0 20 18.0 21 38.0 22 131.0 23 448.0 24 1225.0 25 2906.0 26 5741.0 27 10385.0 28 16990.0 29 26190.0 30 37251.0 31 53448.0 32 75929.0 33 122466.0 34 253064.0 35 833530.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.15482748824186 17.427261379746756 11.572121105192197 26.845790026819188 2 16.140129591673016 19.8468765128463 36.897162221575506 27.115831673905177 3 18.386719471690462 23.74204903310408 28.495126277815363 29.376105217390098 4 12.236449862616373 15.633117649837056 35.365865516848594 36.76456697069798 5 14.204063999377675 36.89861671773985 33.569043259867584 15.328276023014883 6 35.27844918597544 35.22330110573984 16.226523865088627 13.271725843196089 7 30.727904523174992 30.11085852324306 20.414679360422515 18.74655759315943 8 28.450773876829814 33.23586365543242 18.74876715906218 19.56459530867559 9 27.5890019336771 13.710215149359886 17.79128789562589 40.90949502133713 10 15.430601155900742 27.05253645963203 32.146153862182345 25.37070852228488 11 37.83411725810619 20.611850275461812 22.011732478378402 19.542299988053596 12 24.748169658949866 23.308970459639426 28.877471854664567 23.06538802674614 13 30.021566169244075 19.26313852009543 24.793940635733165 25.921354674927333 14 23.526351614157914 19.075262543757294 25.201353003278328 32.197032838806464 15 25.310550809196357 27.05334444675974 22.014794748906024 25.621309995137874 16 25.87674578192416 25.573083216878416 23.521068847776984 25.02910215342044 17 24.362812238672447 25.70400426736604 24.972287124834345 24.960896369127163 18 24.958135470907365 25.04078796301891 25.671030579338407 24.330045986735314 19 25.828000858474624 24.7544213874089 25.041204698273255 24.376373055843217 20 26.00053481321475 24.233914798003827 24.878607818691375 24.88694257009005 21 26.6835398023565 23.95566217796806 24.48616578828197 24.874632231393477 22 26.0381048825397 24.17675686901247 24.686076805696494 25.099061442751342 23 24.844869762835142 24.141209842209594 25.185065823562013 25.82885457139325 24 25.105208726194768 24.59783143961099 24.99532907289216 25.30163076130208 25 25.26068961110312 24.279678469500375 25.07440584717091 25.385226072225592 26 25.03884535692927 24.891521258499267 25.243751575867744 24.82588180870372 27 25.459650117178654 24.711707168666415 24.704066592483617 25.124576121671318 28 24.907983471407327 24.57367469456903 25.175819466314554 25.34252236770909 29 24.933338056450978 24.731008031383727 25.106426426676727 25.229227485488572 30 25.021653621242567 24.785912192221645 25.231000900873994 24.961433285661794 31 25.303201642637447 24.47528403012984 24.708467973848943 25.51304635338377 32 25.099325144681313 24.69660683079163 24.633469378683017 25.57059864584404 33 24.892790015683843 24.417412540685614 25.009689532110208 25.680107911520334 34 25.265590390333653 24.48328386759342 25.143344143328168 25.107781598744754 35 25.658201357348204 24.376701286848338 25.113164443894952 24.851932911908502 36 24.982634837017525 24.78932584269663 24.897753920359193 25.330285399926648 37 25.513453741757896 24.71336261235762 24.635083013188066 25.138100632696425 38 25.03988880453062 24.584076291983965 25.08837358565795 25.287661317827464 39 25.452440207738736 24.47591257302772 24.68463762760533 25.387009591628217 40 25.579101637112515 24.609058642939996 25.103804185507006 24.708035534440487 41 25.020907075343263 24.668265143390585 25.2465784633508 25.064249317915348 42 25.705458705305205 24.893227026880606 24.760633365677204 24.64068090213699 43 25.200486752524405 24.347766897772246 24.928772158422387 25.522974191280962 44 24.869299590274096 24.848323624424637 24.721356519878896 25.561020265422368 45 24.993193234352773 24.82795552542674 24.90748355263158 25.271367687588903 46 24.90277805753372 24.725038496346926 24.83123771051442 25.540945735604936 47 25.136761183994842 24.556585373985232 25.166627770646844 25.140025671373085 48 25.53143165134333 25.05224890831211 24.381226371651053 25.03509306869351 49 24.976315431225846 24.97791292413437 24.59180583376628 25.45396581087351 50 24.980083361636837 25.144625702638855 24.68218462775855 25.193106307965753 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 7.0 1 14.5 2 22.0 3 76.0 4 130.0 5 164.0 6 198.0 7 186.0 8 174.0 9 238.5 10 303.0 11 479.0 12 655.0 13 1214.0 14 1773.0 15 2320.0 16 2867.0 17 3208.0 18 3549.0 19 3683.0 20 3817.0 21 4186.5 22 4556.0 23 5362.5 24 6169.0 25 7177.0 26 8185.0 27 10037.5 28 11890.0 29 13993.0 30 16096.0 31 18584.0 32 21072.0 33 24607.0 34 28142.0 35 32682.5 36 37223.0 37 43041.0 38 48859.0 39 53532.0 40 58205.0 41 63926.0 42 69647.0 43 73034.5 44 76422.0 45 84008.0 46 91594.0 47 97518.0 48 103442.0 49 107550.5 50 111659.0 51 111847.5 52 112036.0 53 110840.0 54 109644.0 55 109074.0 56 108504.0 57 105082.5 58 101661.0 59 93968.0 60 86275.0 61 75622.0 62 64969.0 63 56369.5 64 47770.0 65 40529.0 66 33288.0 67 28362.0 68 23436.0 69 20559.0 70 17682.0 71 13827.5 72 9973.0 73 8421.5 74 6870.0 75 5430.0 76 3990.0 77 3407.0 78 2824.0 79 2322.0 80 1820.0 81 1433.0 82 1046.0 83 847.5 84 649.0 85 484.0 86 319.0 87 236.5 88 154.0 89 115.0 90 76.0 91 61.5 92 47.0 93 36.5 94 26.0 95 24.0 96 22.0 97 20.0 98 18.0 99 13.5 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008543066780389009 2 7.640141023112122E-4 3 1.3891165496567493E-4 4 0.0 5 0.0 6 2.7782330993134986E-4 7 6.945582748283746E-5 8 0.0 9 0.0013891165496567493 10 0.0014585723771395867 11 0.0 12 3.472791374141873E-4 13 6.251024473455371E-4 14 2.7782330993134986E-4 15 0.004445172958901598 16 5.556466198626997E-4 17 0.0 18 6.945582748283746E-5 19 6.945582748283746E-5 20 6.251024473455371E-4 21 0.0 22 6.945582748283746E-5 23 4.167349648970248E-4 24 4.8619079237986225E-4 25 0.0017363956870709366 26 0.005625922026109835 27 0.005695377853592672 28 0.0053480987161784845 29 0.0025698656168649863 30 0.0035422472016247105 31 0.008890345917803195 32 0.0033338797191761983 33 0.0045840846138672725 34 0.003264423891693361 35 0.003125512236727686 36 0.006945582748283746 37 0.0036811588565903858 38 0.009515448365148733 39 0.00493136375128146 40 0.0023614981344164737 41 0.004167349648970248 42 0.0018753073420366116 43 0.0012502048946910743 44 0.0014585723771395867 45 0.0013891165496567493 46 0.0011807490672082368 47 0.001944763169519449 48 0.0014585723771395867 49 5.556466198626997E-4 50 9.02925757276887E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1439764.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.88481981873305 #Duplication Level Percentage of deduplicated Percentage of total 1 79.17896746679158 48.207971676489315 2 12.44892756311675 15.15901423233646 3 3.8376918778113187 7.009715355010723 4 1.5513429923677262 3.778129542694527 5 0.8210367857422485 2.4994338382234265 6 0.48601111486081433 1.7754419494921352 7 0.3226855615743371 1.3752656592192143 8 0.2196945999576678 1.0700852906856995 9 0.17345756617479716 0.950483939647364 >10 0.85957079298609 9.22274914477903 >50 0.05421903703543879 2.288416545476698 >100 0.04294099971697963 5.1911620132668945 >500 0.003453641864139476 1.4721308126785742 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.3891165496567493E-4 2 0.0 0.0 0.0 0.0 1.3891165496567493E-4 3 0.0 0.0 0.0 0.0 1.3891165496567493E-4 4 0.0 0.0 0.0 0.0 1.3891165496567493E-4 5 0.0 0.0 0.0 0.0 1.3891165496567493E-4 6 0.0 0.0 0.0 0.0 2.7782330993134986E-4 7 0.0 0.0 0.0 0.0 2.7782330993134986E-4 8 0.0 0.0 0.0 0.0 2.7782330993134986E-4 9 0.0 0.0 0.0 0.0 2.7782330993134986E-4 10 0.0 0.0 0.0 0.0 2.7782330993134986E-4 11 0.0 0.0 0.0 0.0 2.7782330993134986E-4 12 0.0 0.0 0.0 0.0 8.334699297940496E-4 13 0.0 0.0 0.0 0.0 9.029257572768871E-4 14 0.0 0.0 0.0 0.0 9.723815847597245E-4 15 0.0 0.0 0.0 0.0 0.0013196607221739119 16 0.0 0.0 0.0 2.083674824485124E-4 0.0013891165496567493 17 0.0 0.0 0.0 2.083674824485124E-4 0.0013891165496567493 18 0.0 0.0 0.0 2.7782330993134986E-4 0.0013891165496567493 19 0.0 0.0 0.0 2.7782330993134986E-4 0.0013891165496567493 20 0.0 0.0 0.0 4.167349648970248E-4 0.0015280282046224243 21 0.0 0.0 0.0 4.167349648970248E-4 0.0015974840321052617 22 0.0 0.0 0.0 6.945582748283746E-4 0.0015974840321052617 23 0.0 0.0 0.0 0.0011112932397253994 0.0016669398595880991 24 0.0 0.0 0.0 0.0016669398595880991 0.0016669398595880991 25 0.0 0.0 0.0 0.002083674824485124 0.0016669398595880991 26 0.0 0.0 0.0 0.002500409789382149 0.0016669398595880991 27 0.0 0.0 0.0 0.0031949680642105235 0.0018058515145537742 28 0.0 0.0 0.0 0.00493136375128146 0.0018058515145537742 29 0.0 0.0 0.0 0.009376536710183058 0.0018058515145537742 30 0.0 0.0 0.0 0.016599942768398154 0.0018058515145537742 31 0.0 0.0 0.0 0.033824987984141845 0.0018058515145537742 32 0.0 0.0 0.0 0.05334207550681917 0.0018058515145537742 33 0.0 0.0 0.0 0.07140059065235692 0.0018058515145537742 34 0.0 0.0 0.0 0.09550176278890152 0.0018753073420366116 35 0.0 0.0 0.0 0.1221728005423111 0.0018753073420366116 36 0.0 0.0 0.0 0.16141534307011426 0.0018753073420366116 37 0.0 0.0 0.0 0.2182302099510753 0.0018753073420366116 38 0.0 0.0 0.0 0.29692366248913016 0.0018753073420366116 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACCGTA 45 0.001398202 24.444868 7 GTATCAA 2215 0.0 21.850637 1 CGTATAT 205 0.0 20.390596 10 GTCCTAT 340 0.0 18.76438 1 ACCGTAT 60 0.0074120285 18.333652 8 TAGCGTA 235 0.0 17.787542 7 TAACGGC 140 8.3702616E-8 17.286615 36 TTAACGG 140 8.3702616E-8 17.286615 35 AGCGTAT 245 0.0 17.06152 8 TAGGACG 245 0.0 17.06152 4 GTATTAC 155 1.439912E-8 17.031961 1 AACGCAG 2810 0.0 16.989618 6 ATAGCGT 260 0.0 16.92337 6 GTATTAG 340 0.0 16.823236 1 AAATTCG 80 0.0019888303 16.499712 21 GATATAA 190 6.166374E-10 16.210245 1 CGTTTAT 340 0.0 16.17675 31 GTACCGT 110 5.621604E-5 16.000278 6 TTAGACC 110 5.621604E-5 16.000278 4 GGTATAT 110 5.623274E-5 15.999723 1 >>END_MODULE