##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064052_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 865092 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.366472005289612 32.0 32.0 32.0 32.0 32.0 2 31.414680750717842 32.0 32.0 32.0 32.0 32.0 3 31.497933167801808 32.0 32.0 32.0 32.0 32.0 4 31.589339630929427 32.0 32.0 32.0 32.0 32.0 5 31.5270919162355 32.0 32.0 32.0 32.0 32.0 6 35.13523648351852 36.0 36.0 36.0 36.0 36.0 7 35.15608744503475 36.0 36.0 36.0 36.0 36.0 8 35.10001364016775 36.0 36.0 36.0 36.0 36.0 9 35.20776171782885 36.0 36.0 36.0 36.0 36.0 10 35.05944685651931 36.0 36.0 36.0 36.0 36.0 11 35.207303963046705 36.0 36.0 36.0 36.0 36.0 12 35.10737701886042 36.0 36.0 36.0 36.0 36.0 13 35.158393558141796 36.0 36.0 36.0 36.0 36.0 14 35.09411715748151 36.0 36.0 36.0 36.0 36.0 15 35.06712580858452 36.0 36.0 36.0 36.0 36.0 16 35.07524980002127 36.0 36.0 36.0 36.0 36.0 17 35.04700887304472 36.0 36.0 36.0 36.0 36.0 18 35.043173442824575 36.0 36.0 36.0 36.0 36.0 19 35.04656614556602 36.0 36.0 36.0 36.0 36.0 20 35.0332877890444 36.0 36.0 36.0 36.0 36.0 21 35.02459507196922 36.0 36.0 36.0 36.0 36.0 22 35.01554747934324 36.0 36.0 36.0 36.0 36.0 23 34.96764968350187 36.0 36.0 36.0 36.0 36.0 24 34.9357756169286 36.0 36.0 36.0 36.0 36.0 25 34.91104645517471 36.0 36.0 36.0 32.0 36.0 26 34.846768898568016 36.0 36.0 36.0 32.0 36.0 27 34.850380075182755 36.0 36.0 36.0 32.0 36.0 28 34.8306087676224 36.0 36.0 36.0 32.0 36.0 29 34.79530038423659 36.0 36.0 36.0 32.0 36.0 30 34.780857989670466 36.0 36.0 36.0 32.0 36.0 31 34.78040485867399 36.0 36.0 36.0 32.0 36.0 32 34.74344809569387 36.0 36.0 36.0 32.0 36.0 33 34.71753986859201 36.0 36.0 36.0 32.0 36.0 34 34.712595885755505 36.0 36.0 36.0 32.0 36.0 35 34.67674998728459 36.0 36.0 36.0 32.0 36.0 36 34.644137270949216 36.0 36.0 36.0 32.0 36.0 37 34.64433840562622 36.0 36.0 36.0 32.0 36.0 38 34.60511598766374 36.0 36.0 36.0 32.0 36.0 39 34.61053968826437 36.0 36.0 36.0 32.0 36.0 40 34.58827847211626 36.0 36.0 36.0 32.0 36.0 41 34.57712243322098 36.0 36.0 36.0 32.0 36.0 42 34.510210474724076 36.0 36.0 36.0 32.0 36.0 43 34.514533714333275 36.0 36.0 36.0 32.0 36.0 44 34.4408606252283 36.0 36.0 36.0 32.0 36.0 45 34.43017158868652 36.0 36.0 36.0 32.0 36.0 46 34.40746186532762 36.0 36.0 36.0 32.0 36.0 47 34.39889514641217 36.0 36.0 36.0 32.0 36.0 48 34.348497038465275 36.0 36.0 36.0 32.0 36.0 49 34.3469214834954 36.0 36.0 36.0 32.0 36.0 50 33.741189376390025 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 0.0 18 3.0 19 0.0 20 7.0 21 18.0 22 72.0 23 247.0 24 576.0 25 1403.0 26 2881.0 27 5318.0 28 8967.0 29 13707.0 30 20381.0 31 29081.0 32 43227.0 33 70963.0 34 150736.0 35 517504.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.68976439851102 18.894707636817646 12.463411250606923 25.952116714064417 2 15.809544726818753 20.24286630793506 37.34765947854835 26.59992948669784 3 17.87034136451016 24.199184590682787 29.290580022587324 28.639894022219732 4 12.120213803849763 15.999454393289964 36.46664169822401 35.41369010463627 5 14.140230172051066 37.05802388647682 33.68138880026633 15.12035714120579 6 34.36212564675202 36.549291867223374 16.180244413310955 12.908338072713654 7 29.875504282791386 30.749286201435687 20.951924077263637 18.42328543850929 8 28.02615213179639 33.55724015480435 19.00283438062079 19.41377333277848 9 27.025202468228148 13.954413148470534 18.734351049736787 40.286033333564525 10 15.995843163819343 26.863380423336082 31.345041678178116 25.795734734666464 11 37.82938693225692 20.924595303158508 22.34132323498541 18.904694529599166 12 24.199128644567207 23.87118550808067 28.932052077878694 22.99763376947343 13 29.256017024877266 19.433999123787547 25.56979818214815 25.74018566918703 14 23.487124475922187 19.841843228053467 24.827677088306316 31.843355207718034 15 25.17712910396776 27.68785973478898 22.002041507571267 25.132969653672 16 25.744291023425443 25.816653854823514 23.84748319529295 24.591571926458094 17 23.900926144271363 26.122770757329857 25.11675058837673 24.859552510022056 18 24.944312216865047 24.97459804806662 26.077603396636885 24.003486338431447 19 25.627447716543443 25.027858308711675 24.92289837381458 24.421795600930306 20 25.964354988983757 24.37931026510659 24.609345198049674 25.046989547859983 21 27.302182889218717 24.34561873188054 23.990511991788157 24.361686387112584 22 26.064425592220935 24.462397597478184 24.924083131138804 24.549093679162077 23 24.675377219011864 24.202704717824112 25.321675080137005 25.800242983027022 24 24.941768862553708 25.119670044746943 24.99945092227718 24.939110170422165 25 24.84515847125924 24.593736056170656 25.396900626301903 25.164204846268195 26 24.56022519059702 25.61936084249952 25.624447283089317 24.195966683814138 27 25.25761993170211 24.84538180002173 24.944799857577852 24.95219841069831 28 24.472550427196296 24.77472634814504 25.741365617836472 25.011357606822195 29 24.61373068075416 24.594425884610494 25.478978579768114 25.312864854867236 30 24.450039419139898 25.136117411237574 25.733415639572655 24.68042753004987 31 25.362731826415867 24.7113115915809 24.635245129376568 25.290711452626663 32 25.012686966583857 24.91824275975914 24.440357385201736 25.62871288845526 33 24.614445588882994 24.609127995625702 25.199265247331663 25.57716116815964 34 25.36326708019966 24.760191707915926 25.494239745869102 24.38230146601531 35 25.82182255776774 24.504571364496524 25.461847111006303 24.211758966729438 36 24.457348568574773 25.247742227853486 25.014797482578278 25.280111720993464 37 25.70038413476044 24.84125396937326 24.714095306573753 24.744266589292547 38 24.92338354009084 24.66258122616393 24.967428611724777 25.446606622020457 39 25.73157620946766 24.474539043985896 24.38991965782325 25.403965088723197 40 25.82470109389865 24.775423057760577 25.07008095289288 24.329794895447886 41 24.64326173907012 25.147966615032484 25.757057313943545 24.451714331953852 42 26.05592611002578 25.331129272775616 24.948732472516674 23.664212144681933 43 25.108140537616265 24.230763006341625 25.35054642471546 25.310550031326656 44 24.658181902251815 24.9812734082397 24.909141351088916 25.45140333841957 45 24.86654444318573 25.279106489327024 24.856025209170923 24.998323858316322 46 24.728350079298657 24.82371654082147 24.930642573437957 25.517290806441917 47 25.14819575711617 24.720138901733037 25.320666950265412 24.810998390885384 48 25.752314279637112 25.29096113119954 24.24837931066372 24.708345278499625 49 24.826924521867795 25.430564626597384 24.78218903344758 24.960321818087237 50 25.001271558699774 25.410019882554213 24.446525176862256 25.142183381883754 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2.0 1 3.5 2 5.0 3 25.0 4 45.0 5 53.0 6 61.0 7 60.5 8 60.0 9 76.5 10 93.0 11 152.5 12 212.0 13 414.5 14 617.0 15 829.0 16 1041.0 17 1111.5 18 1182.0 19 1263.0 20 1344.0 21 1657.5 22 1971.0 23 2342.5 24 2714.0 25 3699.5 26 4685.0 27 6365.0 28 8045.0 29 9598.5 30 11152.0 31 12752.0 32 14352.0 33 16679.5 34 19007.0 35 22436.5 36 25866.0 37 30905.5 38 35945.0 39 38535.5 40 41126.0 41 44371.0 42 47616.0 43 47759.0 44 47902.0 45 52447.5 46 56993.0 47 59849.5 48 62706.0 49 65590.0 50 68474.0 51 65209.0 52 61944.0 53 61645.5 54 61347.0 55 61650.0 56 61953.0 57 60239.0 58 58525.0 59 53218.5 60 47912.0 61 41942.0 62 35972.0 63 31032.5 64 26093.0 65 22058.0 66 18023.0 67 15630.5 68 13238.0 69 12090.5 70 10943.0 71 8168.0 72 5393.0 73 4711.5 74 4030.0 75 3068.0 76 2106.0 77 1886.0 78 1666.0 79 1399.0 80 1132.0 81 917.0 82 702.0 83 570.5 84 439.0 85 332.5 86 226.0 87 155.0 88 84.0 89 66.5 90 49.0 91 42.0 92 35.0 93 28.0 94 21.0 95 20.5 96 20.0 97 15.5 98 11.0 99 11.5 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008322814220915232 2 8.091624937000921E-4 3 5.7797320978578E-4 4 0.0 5 0.0 6 0.0 7 2.31189283914312E-4 8 0.0 9 0.002080703555228808 10 0.0012715410615287159 11 0.0 12 3.46783925871468E-4 13 5.7797320978578E-4 14 1.15594641957156E-4 15 0.00520175888807202 16 8.091624937000921E-4 17 0.0 18 1.15594641957156E-4 19 0.0 20 6.93567851742936E-4 21 0.0 22 1.15594641957156E-4 23 0.0012715410615287159 24 5.7797320978578E-4 25 0.0016183249874001842 26 0.005432948171986332 27 0.006704489233515048 28 0.003814623184586148 29 0.0025430821230574318 30 0.0034678392587146802 31 0.006820083875472204 32 0.003583433900671836 33 0.004508191036329084 34 0.003005460690886056 35 0.003814623184586148 36 0.00924757135657248 37 0.003583433900671836 38 0.007976030295043764 39 0.004854974962200552 40 0.002427487481100276 41 0.003699028542628992 42 0.0025430821230574318 43 0.0016183249874001842 44 0.001387135703485872 45 0.00115594641957156 46 9.24757135657248E-4 47 0.00231189283914312 48 0.0032366499748003683 49 8.091624937000921E-4 50 0.001387135703485872 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 865092.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.87488392277966 #Duplication Level Percentage of deduplicated Percentage of total 1 74.24131729607275 37.77018399711955 2 14.334081113555794 14.584894255837183 3 4.954211208492536 7.561347604829752 4 2.1613673699567344 4.398372562441296 5 1.1558993441300247 2.9403122479516077 6 0.7102245310330875 2.1679554345251364 7 0.46173975985031424 1.6443669679441826 8 0.3167186987101089 1.289042162644049 9 0.25034030279300035 1.1462430461208664 >10 1.2305445826441215 11.148154371663738 >50 0.08686441533625411 3.0676180578510333 >100 0.08686223032126947 8.57632159539751 >500 0.008914807838493645 3.184779832200251 >1k 9.143392654865275E-4 0.5204078634738962 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1189 0.13744202928705848 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1178 0.13617048822552977 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1088 0.12576697044938573 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 1020 0.11790653479629913 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 983 0.11362953304388435 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 977 0.11293596519214141 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 931 0.10761861166211223 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA 928 0.10727182773624076 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 924 0.10680944916841215 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 889 0.10276363669991168 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 877 0.10137650099642581 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA 868 0.10033614921881141 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.15594641957156E-4 1.15594641957156E-4 2 0.0 0.0 0.0 1.15594641957156E-4 1.15594641957156E-4 3 0.0 0.0 0.0 1.15594641957156E-4 1.15594641957156E-4 4 0.0 0.0 0.0 1.15594641957156E-4 1.15594641957156E-4 5 0.0 0.0 0.0 1.15594641957156E-4 1.15594641957156E-4 6 0.0 0.0 0.0 1.15594641957156E-4 1.15594641957156E-4 7 0.0 0.0 0.0 1.15594641957156E-4 1.15594641957156E-4 8 0.0 0.0 0.0 1.15594641957156E-4 1.15594641957156E-4 9 0.0 0.0 0.0 1.15594641957156E-4 1.15594641957156E-4 10 0.0 0.0 0.0 1.15594641957156E-4 1.15594641957156E-4 11 0.0 0.0 0.0 2.31189283914312E-4 1.15594641957156E-4 12 0.0 0.0 0.0 2.31189283914312E-4 2.31189283914312E-4 13 0.0 0.0 0.0 3.46783925871468E-4 3.46783925871468E-4 14 0.0 0.0 0.0 3.46783925871468E-4 3.46783925871468E-4 15 0.0 0.0 0.0 3.46783925871468E-4 4.62378567828624E-4 16 0.0 0.0 0.0 4.62378567828624E-4 4.62378567828624E-4 17 0.0 0.0 0.0 4.62378567828624E-4 4.62378567828624E-4 18 0.0 0.0 0.0 4.62378567828624E-4 4.62378567828624E-4 19 0.0 0.0 0.0 4.62378567828624E-4 4.62378567828624E-4 20 0.0 0.0 0.0 6.93567851742936E-4 4.62378567828624E-4 21 0.0 0.0 0.0 6.93567851742936E-4 4.62378567828624E-4 22 0.0 0.0 0.0 0.00115594641957156 4.62378567828624E-4 23 0.0 0.0 0.0 0.001271541061528716 4.62378567828624E-4 24 0.0 0.0 0.0 0.001387135703485872 4.62378567828624E-4 25 0.0 0.0 0.0 0.001502730345443028 4.62378567828624E-4 26 0.0 0.0 0.0 0.001849514271314496 4.62378567828624E-4 27 0.0 0.0 0.0 0.002196298197185964 4.62378567828624E-4 28 0.0 0.0 0.0 0.004277001752414772 4.62378567828624E-4 29 0.0 0.0 0.0 0.007166867801343672 4.62378567828624E-4 30 0.0 0.0 0.0 0.015374087380301748 4.62378567828624E-4 31 0.0 0.0 0.0 0.026702362292103037 4.62378567828624E-4 32 0.0 0.0 0.0 0.04138288182066185 5.7797320978578E-4 33 0.0 0.0 0.0 0.05363591386812038 5.7797320978578E-4 34 0.0 0.0 0.0 0.06808524411276488 5.7797320978578E-4 35 0.0 0.0 0.0 0.08634919754199553 5.7797320978578E-4 36 0.0 0.0 0.0 0.11594142588302747 5.7797320978578E-4 37 0.0 0.0 0.0 0.1584802541232609 5.7797320978578E-4 38 0.0 0.0 0.0 0.2233288482612254 5.7797320978578E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1135 0.0 25.780888 1 ATTTCGT 105 1.1277734E-10 25.141075 42 GTCCTAA 190 0.0 24.316875 1 GGTATCA 510 0.0 23.72655 1 CTAGGAC 110 5.2496034E-9 21.999712 3 GATCGTA 60 2.872119E-4 21.99971 12 GTCTTAG 145 1.2732926E-11 21.242327 1 GATTTCG 125 9.968062E-10 21.1185 41 ATAATAC 75 5.4708835E-5 20.533064 3 TATATGC 75 5.4708835E-5 20.533064 4 TCTATAC 75 5.4708835E-5 20.533064 3 GTATAAA 110 1.2639975E-7 20.000893 1 GGCGTTA 330 0.0 19.99858 42 GTAACGG 55 0.0044844393 19.99858 16 ATAGGGG 80 8.985713E-5 19.249746 3 CGCAATA 275 0.0 19.199747 36 ATACACT 300 0.0 19.066416 4 CGTGATT 70 8.1246486E-4 18.855804 28 CGAATGC 270 0.0 18.73941 43 CATTAGG 60 0.0074085337 18.334152 1 >>END_MODULE