FastQCFastQC Report
Thu 2 Feb 2017
SRR4064051_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4064051_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1150675
Sequences flagged as poor quality0
Sequence length50
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTACGGT300.00574451229.333746
TATTAGG1001.7462298E-924.198232
GTAGGAC10300.021.3595183
TGTAGGA11100.020.4129242
AATCACG5500.020.40116934
GGCGTTA2600.020.3070942
GGCGAGA7550.019.81312219
GATATAC5350.019.738591
GTATCAA25900.019.3670641
GCGAGAA7200.019.2494320
TAGGACC8800.018.750264
CTGTAGG11400.018.7195571
AGGACCT10550.018.3509655
GTGTAGG2050.018.2441561
CGGCGTT2850.017.75463141
ATACGAA2850.017.75463140
TGGCGAG11650.017.74977518
GTCCTAC8250.017.6002431
TAAGGCG750.001290699417.6002435
CACCGGT750.001290699417.6002437
Produced by FastQC (version 0.11.5)