##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064051_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1150675 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.297689616963957 32.0 32.0 32.0 32.0 32.0 2 31.390276142264323 32.0 32.0 32.0 32.0 32.0 3 31.465613661546485 32.0 32.0 32.0 32.0 32.0 4 31.553257870380428 32.0 32.0 32.0 32.0 32.0 5 31.496731049166794 32.0 32.0 32.0 32.0 32.0 6 35.079161361809376 36.0 36.0 36.0 36.0 36.0 7 35.08942750993982 36.0 36.0 36.0 36.0 36.0 8 35.03681752015122 36.0 36.0 36.0 36.0 36.0 9 35.153369978490886 36.0 36.0 36.0 36.0 36.0 10 35.006584830642886 36.0 36.0 36.0 36.0 36.0 11 35.14760119060551 36.0 36.0 36.0 36.0 36.0 12 35.05377017837356 36.0 36.0 36.0 36.0 36.0 13 35.102747517761316 36.0 36.0 36.0 36.0 36.0 14 35.04707410867534 36.0 36.0 36.0 36.0 36.0 15 35.01722206530949 36.0 36.0 36.0 36.0 36.0 16 35.027737632259324 36.0 36.0 36.0 36.0 36.0 17 34.99545571077846 36.0 36.0 36.0 36.0 36.0 18 34.99310839289982 36.0 36.0 36.0 36.0 36.0 19 34.98686683902927 36.0 36.0 36.0 36.0 36.0 20 34.97180350663741 36.0 36.0 36.0 36.0 36.0 21 34.96064657700915 36.0 36.0 36.0 36.0 36.0 22 34.947007625958676 36.0 36.0 36.0 36.0 36.0 23 34.89957807373933 36.0 36.0 36.0 32.0 36.0 24 34.877129510939234 36.0 36.0 36.0 32.0 36.0 25 34.840059095748146 36.0 36.0 36.0 32.0 36.0 26 34.79002150911422 36.0 36.0 36.0 32.0 36.0 27 34.77360679601104 36.0 36.0 36.0 32.0 36.0 28 34.746935494383735 36.0 36.0 36.0 32.0 36.0 29 34.712701675103744 36.0 36.0 36.0 32.0 36.0 30 34.693638951050474 36.0 36.0 36.0 32.0 36.0 31 34.68638494796532 36.0 36.0 36.0 32.0 36.0 32 34.643840354574486 36.0 36.0 36.0 32.0 36.0 33 34.61290633758446 36.0 36.0 36.0 32.0 36.0 34 34.6034901253612 36.0 36.0 36.0 32.0 36.0 35 34.555467008495015 36.0 36.0 36.0 32.0 36.0 36 34.51687574684424 36.0 36.0 36.0 32.0 36.0 37 34.49648423751277 36.0 36.0 36.0 32.0 36.0 38 34.45124035891976 36.0 36.0 36.0 32.0 36.0 39 34.43161796336933 36.0 36.0 36.0 32.0 36.0 40 34.41352423577465 36.0 36.0 36.0 32.0 36.0 41 34.39613878810263 36.0 36.0 36.0 32.0 36.0 42 34.328873052773375 36.0 36.0 36.0 32.0 36.0 43 34.31260347187521 36.0 36.0 36.0 32.0 36.0 44 34.231975145023576 36.0 36.0 36.0 32.0 36.0 45 34.20714276402981 36.0 36.0 36.0 32.0 36.0 46 34.14376170508614 36.0 36.0 36.0 32.0 36.0 47 34.11805939991744 36.0 36.0 36.0 32.0 36.0 48 34.06784452603907 36.0 36.0 36.0 32.0 36.0 49 34.035672105503295 36.0 36.0 36.0 32.0 36.0 50 33.432692984552546 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 4.0 19 1.0 20 8.0 21 34.0 22 127.0 23 367.0 24 946.0 25 2090.0 26 4504.0 27 8390.0 28 13987.0 29 21539.0 30 30951.0 31 44160.0 32 62690.0 33 99890.0 34 202562.0 35 658424.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.29055197426687 18.550312494839556 12.156748906420159 26.002386624473417 2 15.187678755639139 21.01240762934065 38.598790436470104 25.201123178550105 3 18.338643264730063 25.15647351030787 29.043586628358685 27.46129659660338 4 11.943685228235601 16.504399591544093 36.848806135529145 34.70310904469116 5 13.511460664392638 37.803202468116545 33.791730940534904 14.893605926955916 6 33.01204253865787 36.70753847103125 17.1446051912319 13.13581379907897 7 28.9795989310622 30.905164360049536 21.446889868989942 18.66834683989832 8 27.070719360375435 34.4427401307928 19.791687487778912 18.69485302105286 9 27.469886847548363 13.997010411416058 18.752020579493507 39.781082161542066 10 15.44577739461737 27.578511190060695 32.19010936294174 24.78560205238019 11 36.84440597423771 21.153862866459136 23.401502076174484 18.60022908312867 12 24.676841572852084 23.779106853896064 30.057948645750233 21.486102927501623 13 29.765267192157612 20.062919864079188 25.67825701547794 24.49355592828526 14 23.03556266637003 20.436909530335726 25.990702832168655 30.536824971125593 15 24.37418467798637 28.757477496895152 22.716815905177995 24.151521919940482 16 24.464571883462476 26.216510757229717 25.299912746335174 24.019004612972637 17 23.08045277771743 26.554152997153846 26.22191322484629 24.143481000282442 18 23.807827078437644 25.520826091188454 27.880403798823643 22.79094303155026 19 25.417016461656385 24.82049650900255 26.059074942164333 23.703412087176734 20 25.494081279531684 25.0038455822733 25.86238811962759 23.639685018567427 21 26.272666043843827 24.45738370956178 25.043735198904994 24.2262150476894 22 25.33089302443611 25.25719708622946 25.78158540125179 23.63032448808264 23 23.870672820799836 25.065114633911058 26.427372740759026 24.636839804530084 24 24.579267958838003 25.263302432576413 26.36639601346343 23.791033595122162 25 24.417594107023984 25.22495824128455 26.39559278256441 23.961854869127055 26 23.417783676062495 26.263126652917524 26.969530260720987 23.349559410298994 27 24.305586939819854 25.563265462206196 26.13087643793042 24.000271160043525 28 23.535843035281605 25.808515002242256 26.432435157148966 24.223206805327177 29 23.836158835302797 25.264654530348473 26.082191733201466 24.816994901147265 30 23.508272431861183 25.800670763556283 26.561124393701185 24.129932410881352 31 24.643007997663798 25.242702414248043 25.707595955452266 24.406693632635893 32 24.032489914255965 25.90902059212573 25.642558798019177 24.415930695599123 33 23.636776062950517 25.5058585907747 26.425277546501096 24.432087799773686 34 24.326356087238025 25.65639271886638 26.57952713478093 23.43772405911467 35 24.72204719961413 25.670819409983096 26.327494579127357 23.279638811275415 36 23.631585031240686 26.104939843540187 26.113196527325712 24.150278597893415 37 24.49334497907677 25.954277420728555 25.410403820499116 24.141973779695558 38 24.12474121612343 25.950960129465816 25.837973046496792 24.086325607913963 39 24.788052551669114 25.2451029384542 25.585435571017495 24.381408938859188 40 25.38150341764836 25.583737816615898 25.932846360084994 23.101912405650744 41 24.12591666854969 25.55747527015541 26.80921996047396 23.50738810082094 42 24.94839895537759 26.593461984695672 25.75289726286333 22.70524179706341 43 23.961010236724803 25.6733303727162 26.36745314215047 23.998206248408525 44 23.57557464996085 26.339560790052985 25.55270597580339 24.532158584182774 45 23.762598237354833 26.45332188480147 25.702098887852763 24.081980989990935 46 23.835471673189016 25.6378301477675 25.595245854766702 24.931452324276783 47 24.50421543978148 25.65339099344632 25.876308281138243 23.96608528563396 48 24.608093803719264 25.998168004741633 25.024898797036133 24.368839394502974 49 24.223973858708405 26.213249671930267 25.318292820704457 24.24448364865687 50 24.135602529685215 26.807988827252604 24.835289751854813 24.22111889120737 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 22.0 1 21.0 2 20.0 3 69.0 4 118.0 5 146.0 6 174.0 7 192.5 8 211.0 9 309.0 10 407.0 11 600.5 12 794.0 13 1396.5 14 1999.0 15 2795.5 16 3592.0 17 3991.5 18 4391.0 19 4403.5 20 4416.0 21 4816.0 22 5216.0 23 5965.0 24 6714.0 25 7720.0 26 8726.0 27 11586.5 28 14447.0 29 17305.5 30 20164.0 31 23049.5 32 25935.0 33 30686.0 34 35437.0 35 41567.0 36 47697.0 37 51787.5 38 55878.0 39 57201.0 40 58524.0 41 60634.5 42 62745.0 43 62734.0 44 62723.0 45 67250.0 46 71777.0 47 75325.5 48 78874.0 49 81584.5 50 84295.0 51 80544.0 52 76793.0 53 75526.0 54 74259.0 55 74452.0 56 74645.0 57 72451.0 58 70257.0 59 63331.0 60 56405.0 61 49259.0 62 42113.0 63 36390.0 64 30667.0 65 25954.0 66 21241.0 67 18554.5 68 15868.0 69 14203.0 70 12538.0 71 9838.0 72 7138.0 73 6012.5 74 4887.0 75 3864.5 76 2842.0 77 2538.5 78 2235.0 79 1837.5 80 1440.0 81 1152.0 82 864.0 83 743.0 84 622.0 85 444.0 86 266.0 87 191.5 88 117.0 89 90.5 90 64.0 91 48.0 92 32.0 93 30.5 94 29.0 95 23.5 96 18.0 97 20.5 98 23.0 99 19.5 100 16.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008342929150281356 2 0.0010428661437851695 3 8.690551198209746E-5 4 0.0 5 0.0 6 3.4762204792838984E-4 7 0.0 8 0.0 9 0.001303582679731462 10 9.559606318030722E-4 11 8.690551198209746E-5 12 8.690551198209746E-5 13 4.3452755991048737E-4 14 1.7381102396419492E-4 15 0.004866708670997458 16 6.083385838746823E-4 17 0.0 18 2.6071653594629237E-4 19 8.690551198209746E-5 20 3.4762204792838984E-4 21 0.0 22 8.690551198209746E-5 23 0.0010428661437851695 24 1.7381102396419492E-4 25 0.0014773937036956569 26 0.005040519694961653 27 0.00547504725487214 28 0.0040845590631585806 29 0.002085732287570339 30 0.003997653551176483 31 0.0077345905664066746 32 0.0035631259912659963 33 0.004953614182979555 34 0.002607165359462924 35 0.002607165359462924 36 0.007995307102352966 37 0.003476220479283899 38 0.008777456710191844 39 0.0031285984313555084 40 0.002607165359462924 41 0.0035631259912659963 42 0.0017381102396419495 43 0.0012166771677493645 44 0.0015642992156777542 45 0.0015642992156777542 46 0.0013904881917135594 47 0.002085732287570339 48 0.0014773937036956569 49 4.3452755991048737E-4 50 0.0015642992156777542 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1150675.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.30830871911704 #Duplication Level Percentage of deduplicated Percentage of total 1 77.53685514362655 45.210428868240356 2 13.652569531105103 15.921164780577746 3 4.254703683422975 7.442537276441737 4 1.707750769786762 3.983042364001452 5 0.8386394281125235 2.4449823339204393 6 0.49053016517797887 1.716119058434224 7 0.3082368647636228 1.2580939188475033 8 0.201126685837237 0.9381885511560384 9 0.15562758689142012 0.8166943243508523 >10 0.7184366829501104 7.470599488644644 >50 0.06470819931440398 2.6885498792706195 >100 0.06451390551332235 7.465828191126836 >500 0.005851256819607434 2.3664553910816424 >1k 4.5009667843134103E-4 0.2773155739059113 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 1.7381102396419492E-4 6 0.0 0.0 0.0 0.0 1.7381102396419492E-4 7 0.0 0.0 0.0 0.0 1.7381102396419492E-4 8 0.0 0.0 0.0 8.690551198209746E-5 1.7381102396419492E-4 9 0.0 0.0 0.0 8.690551198209746E-5 1.7381102396419492E-4 10 0.0 0.0 0.0 3.4762204792838984E-4 1.7381102396419492E-4 11 0.0 0.0 0.0 3.4762204792838984E-4 1.7381102396419492E-4 12 0.0 0.0 0.0 3.4762204792838984E-4 2.6071653594629237E-4 13 0.0 0.0 0.0 3.4762204792838984E-4 3.4762204792838984E-4 14 0.0 0.0 0.0 3.4762204792838984E-4 3.4762204792838984E-4 15 0.0 0.0 0.0 3.4762204792838984E-4 4.345275599104873E-4 16 0.0 0.0 0.0 3.4762204792838984E-4 4.345275599104873E-4 17 0.0 0.0 0.0 3.4762204792838984E-4 4.345275599104873E-4 18 0.0 0.0 0.0 3.4762204792838984E-4 4.345275599104873E-4 19 0.0 0.0 0.0 3.4762204792838984E-4 4.345275599104873E-4 20 0.0 0.0 0.0 6.083385838746823E-4 4.345275599104873E-4 21 0.0 0.0 0.0 6.083385838746823E-4 4.345275599104873E-4 22 0.0 0.0 0.0 8.690551198209746E-4 4.345275599104873E-4 23 0.0 0.0 0.0 0.0010428661437851695 4.345275599104873E-4 24 0.0 0.0 0.0 0.0015642992156777544 4.345275599104873E-4 25 0.0 0.0 0.0 0.0016512047276598517 4.345275599104873E-4 26 0.0 0.0 0.0 0.0019988267755882416 5.214330718925847E-4 27 0.0 0.0 0.0 0.0027809763834271187 5.214330718925847E-4 28 0.0 0.0 0.0 0.004345275599104873 5.214330718925847E-4 29 0.0 0.0 0.0 0.008342929150281356 6.083385838746823E-4 30 0.0 0.0 0.0 0.01442631498902818 6.083385838746823E-4 31 0.0 0.0 0.0 0.0308514567536446 6.083385838746823E-4 32 0.0 0.0 0.0 0.04684207095835053 6.083385838746823E-4 33 0.0 0.0 0.0 0.061876724531253396 6.083385838746823E-4 34 0.0 0.0 0.0 0.07899711039172659 6.083385838746823E-4 35 0.0 0.0 0.0 0.10002824429139417 6.083385838746823E-4 36 0.0 0.0 0.0 0.12844634670954005 6.083385838746823E-4 37 0.0 0.0 0.0 0.17224672474851718 6.083385838746823E-4 38 0.0 0.0 0.0 0.23029960675255828 6.083385838746823E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACGGT 30 0.005744512 29.33374 6 TATTAGG 100 1.7462298E-9 24.19823 2 GTAGGAC 1030 0.0 21.359518 3 TGTAGGA 1110 0.0 20.412924 2 AATCACG 550 0.0 20.401169 34 GGCGTTA 260 0.0 20.30709 42 GGCGAGA 755 0.0 19.813122 19 GATATAC 535 0.0 19.73859 1 GTATCAA 2590 0.0 19.367064 1 GCGAGAA 720 0.0 19.24943 20 TAGGACC 880 0.0 18.75026 4 CTGTAGG 1140 0.0 18.719557 1 AGGACCT 1055 0.0 18.350965 5 GTGTAGG 205 0.0 18.244156 1 CGGCGTT 285 0.0 17.754631 41 ATACGAA 285 0.0 17.754631 40 TGGCGAG 1165 0.0 17.749775 18 GTCCTAC 825 0.0 17.600243 1 TAAGGCG 75 0.0012906994 17.600243 5 CACCGGT 75 0.0012906994 17.600243 7 >>END_MODULE