##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064050_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 658103 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.264145582074537 32.0 32.0 32.0 32.0 32.0 2 31.38592287225556 32.0 32.0 32.0 32.0 32.0 3 31.461496148779144 32.0 32.0 32.0 32.0 32.0 4 31.543062408164072 32.0 32.0 32.0 32.0 32.0 5 31.48434059714057 32.0 32.0 32.0 32.0 32.0 6 35.05314973491991 36.0 36.0 36.0 36.0 36.0 7 35.07478768521037 36.0 36.0 36.0 36.0 36.0 8 35.02823874074423 36.0 36.0 36.0 36.0 36.0 9 35.141442904834044 36.0 36.0 36.0 36.0 36.0 10 34.983520816650284 36.0 36.0 36.0 36.0 36.0 11 35.14016954792791 36.0 36.0 36.0 36.0 36.0 12 35.04218640547148 36.0 36.0 36.0 36.0 36.0 13 35.07426041212394 36.0 36.0 36.0 36.0 36.0 14 35.029493863422594 36.0 36.0 36.0 36.0 36.0 15 34.99815682347596 36.0 36.0 36.0 36.0 36.0 16 35.01785434802759 36.0 36.0 36.0 36.0 36.0 17 34.96860673785107 36.0 36.0 36.0 36.0 36.0 18 34.96929811898745 36.0 36.0 36.0 36.0 36.0 19 34.96441286546331 36.0 36.0 36.0 36.0 36.0 20 34.96354370060614 36.0 36.0 36.0 36.0 36.0 21 34.95734406316336 36.0 36.0 36.0 36.0 36.0 22 34.948381940213004 36.0 36.0 36.0 36.0 36.0 23 34.896807946476464 36.0 36.0 36.0 32.0 36.0 24 34.870717805571466 36.0 36.0 36.0 32.0 36.0 25 34.842744980648924 36.0 36.0 36.0 32.0 36.0 26 34.79160404982199 36.0 36.0 36.0 32.0 36.0 27 34.78689202146169 36.0 36.0 36.0 32.0 36.0 28 34.746911957550715 36.0 36.0 36.0 32.0 36.0 29 34.72731320173286 36.0 36.0 36.0 32.0 36.0 30 34.706384866806566 36.0 36.0 36.0 32.0 36.0 31 34.68234151796907 36.0 36.0 36.0 32.0 36.0 32 34.64900175200538 36.0 36.0 36.0 32.0 36.0 33 34.60423368378506 36.0 36.0 36.0 32.0 36.0 34 34.60135571483491 36.0 36.0 36.0 32.0 36.0 35 34.546026989696145 36.0 36.0 36.0 32.0 36.0 36 34.52571102091922 36.0 36.0 36.0 32.0 36.0 37 34.5093199696704 36.0 36.0 36.0 32.0 36.0 38 34.460877704553845 36.0 36.0 36.0 32.0 36.0 39 34.45921231175059 36.0 36.0 36.0 32.0 36.0 40 34.44700601577565 36.0 36.0 36.0 32.0 36.0 41 34.40989632321992 36.0 36.0 36.0 32.0 36.0 42 34.33335663262438 36.0 36.0 36.0 32.0 36.0 43 34.319032127189814 36.0 36.0 36.0 32.0 36.0 44 34.242071529836515 36.0 36.0 36.0 32.0 36.0 45 34.21658919652395 36.0 36.0 36.0 32.0 36.0 46 34.15988834574527 36.0 36.0 36.0 32.0 36.0 47 34.122901734227014 36.0 36.0 36.0 32.0 36.0 48 34.0596851860575 36.0 36.0 36.0 32.0 36.0 49 34.02028709791628 36.0 36.0 36.0 32.0 36.0 50 33.446185475525866 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 2.0 19 1.0 20 6.0 21 21.0 22 64.0 23 236.0 24 536.0 25 1246.0 26 2684.0 27 4904.0 28 8232.0 29 12375.0 30 17689.0 31 25088.0 32 35668.0 33 56679.0 34 115354.0 35 377317.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.970008449180305 18.691380012521808 12.447952441448395 25.89065909684949 2 15.398267740464973 21.24236438231272 37.66220939067011 25.697158486552198 3 17.68740664426889 25.409473621830088 29.520544718819757 27.382575015081272 4 11.959678044318292 16.771842705473155 36.69380021060533 34.574679039603225 5 13.68721917389831 37.77098721628681 33.594133441117876 14.947660168696997 6 32.72552389374883 36.8210958500291 17.27683136782956 13.176548888392512 7 28.830745339255405 31.36089639463731 21.69158931048787 18.11676895561941 8 27.6891307287765 33.28126448291529 19.945965905033102 19.08363888327511 9 27.592772406163906 14.069069685103383 18.935584700549622 39.40257320818309 10 15.602961891404407 27.623147488272938 32.26610828560705 24.50778233471561 11 36.561602059252124 21.468068068372276 22.98758704944363 18.98274282293197 12 24.273859866920528 24.32096495533374 29.582755282987616 21.822419894758116 13 29.438231271843186 20.119282783771464 25.530770399635315 24.911715544750038 14 23.304933437268748 20.04737874581561 26.347171634749074 30.300516182166565 15 24.724195989520968 27.851190440009972 23.181820944693317 24.242792625775746 16 24.72591509788041 26.128591594881623 24.830458639201698 24.31503466803627 17 23.196672861239044 26.322171453404707 26.04835413301565 24.432801552340592 18 23.94169301765833 25.492666041637857 27.265336884955698 23.30030405574811 19 25.000037987974526 25.23951417939137 26.388726384775634 23.371721447858466 20 25.535940045221366 24.588965743599715 25.927372298266516 23.9477219129124 21 26.523811622192877 24.490543273621302 25.32703847270108 23.658606631484737 22 25.121941583523526 24.807704580748883 25.954335346192536 24.116018489535058 23 23.99722229397794 24.626612794162565 26.393525574497378 24.982639337362123 24 24.30360127640176 25.24358000303905 26.290837258775262 24.161981461783924 25 24.25336959990275 24.961327478004527 26.42465316294124 24.360649759151485 26 24.01176175605753 25.81279964745124 26.593421622484104 23.58201697400713 27 24.60345440675442 25.290931802363925 25.896045637314646 24.20956815356701 28 23.979594937939922 25.338564777106455 26.485703691997227 24.196136592956393 29 23.952644487194682 25.268126050394628 26.342909589324194 24.436319873086497 30 23.84389550079627 25.675458004595242 26.46670880997824 24.013937684630253 31 24.414213574410336 25.384053114747125 25.69147796433993 24.510255346502603 32 24.201727153509392 25.488962537818523 25.691066546923842 24.618243761748246 33 23.98186813520791 25.225508610052454 26.116298011755624 24.676325242984007 34 24.536874527985074 25.292098413118104 26.129986643022235 24.041040415874594 35 24.875167532313604 25.181360377582124 26.20752429028601 23.73594779981826 36 24.02887318592812 25.91748347390016 25.83177570093458 24.22186763923714 37 24.72761587532177 25.679174809065188 25.718987718781054 23.874221596831987 38 24.239932891005633 25.5895592021081 26.023883264390594 24.146624642495677 39 24.733424610489173 25.378493744576936 25.59534030625968 24.29274133867421 40 24.87626978277882 25.539557959838017 26.012597156902224 23.571575100480942 41 23.972276968944552 25.861558075677614 26.351315415579542 23.814849539798292 42 24.83041678569909 26.154867767640607 25.634265534491036 23.38044991216927 43 24.299181872333182 25.41833311046547 25.864929918187237 24.417555099014113 44 24.076803617720266 25.822298942096417 25.441654231766282 24.659243208417035 45 24.09894680218997 26.14547228270862 25.476415875615988 24.27916503948542 46 23.894495154940106 25.75213533649499 25.53560059140577 24.817768917159125 47 24.4113249291888 25.64170749200715 25.785457264074108 24.161510314729945 48 24.844778069868863 26.107371332188606 24.903280706286374 24.144569891656158 49 24.190391675378667 26.16320415258564 25.101808854635188 24.5445953174005 50 24.240610004041976 26.312046607323573 25.057514579984012 24.389828808650435 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 112.0 1 71.0 2 30.0 3 86.5 4 143.0 5 154.0 6 165.0 7 170.5 8 176.0 9 240.5 10 305.0 11 454.5 12 604.0 13 1101.0 14 1598.0 15 2172.0 16 2746.0 17 2996.5 18 3247.0 19 3271.5 20 3296.0 21 3543.0 22 3790.0 23 4374.0 24 4958.0 25 5322.0 26 5686.0 27 6692.0 28 7698.0 29 8909.0 30 10120.0 31 11555.0 32 12990.0 33 14865.0 34 16740.0 35 18887.5 36 21035.0 37 23876.5 38 26718.0 39 28526.5 40 30335.0 41 32760.5 42 35186.0 43 36158.0 44 37130.0 45 40282.0 46 43434.0 47 45875.5 48 48317.0 49 49503.5 50 50690.0 51 48993.5 52 47297.0 53 46218.5 54 45140.0 55 44539.5 56 43939.0 57 42339.5 58 40740.0 59 36525.0 60 32310.0 61 28408.0 62 24506.0 63 21200.5 64 17895.0 65 15164.0 66 12433.0 67 10652.0 68 8871.0 69 7904.5 70 6938.0 71 5335.0 72 3732.0 73 3176.5 74 2621.0 75 2090.0 76 1559.0 77 1354.5 78 1150.0 79 952.0 80 754.0 81 598.0 82 442.0 83 363.0 84 284.0 85 213.0 86 142.0 87 91.5 88 41.0 89 29.5 90 18.0 91 15.5 92 13.0 93 12.0 94 11.0 95 10.0 96 9.0 97 8.0 98 7.0 99 4.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0077495468034638965 2 4.558556943214056E-4 3 3.039037962142704E-4 4 0.0 5 0.0 6 3.039037962142704E-4 7 0.0 8 0.0 9 0.0021273265734998927 10 0.001519518981071352 11 0.0 12 0.0 13 4.558556943214056E-4 14 3.039037962142704E-4 15 0.004102701248892651 16 6.078075924285408E-4 17 0.0 18 0.0 19 0.0 20 0.0010636632867499463 21 0.0 22 1.519518981071352E-4 23 9.117113886428112E-4 24 4.558556943214056E-4 25 0.0019753746753927576 26 0.005774172128071138 27 0.006837835414821084 28 0.004710508841321192 29 0.0025831822678212984 30 0.004710508841321192 31 0.00850930629399957 32 0.003950749350785515 33 0.005318316433749732 34 0.003039037962142704 35 0.003190989860249839 36 0.008053450599678167 37 0.00379879745267838 38 0.01048468096939233 39 0.005166364535642597 40 0.0027351341659284335 41 0.0033429417583569748 42 0.002887086064035569 43 0.002279278471607028 44 0.0013675670829642167 45 0.0018234227772856225 46 0.001519518981071352 47 0.002279278471607028 48 0.0019753746753927576 49 0.0010636632867499463 50 0.0013675670829642167 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 658103.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 66.46424992433654 #Duplication Level Percentage of deduplicated Percentage of total 1 81.51679704954606 54.17952772132447 2 12.317534386806352 16.373513678726134 3 3.265576879533473 6.511323536053433 4 1.1543701203397834 3.068973767337992 5 0.5338322908538606 1.7740381398496048 6 0.2738116369262942 1.0919211041316548 7 0.17827439220737473 0.8294211631146103 8 0.11439463609242669 0.6082522946600462 9 0.08455451243442892 0.5057867022005075 >10 0.45194038991840074 5.728430209918587 >50 0.06249910645536669 2.994510974578964 >100 0.04503594743421323 5.7976482817538555 >500 0.0013786514519994134 0.5366524263502234 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 715 0.10864560714660167 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 663 0.10074410844503064 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 1.519518981071352E-4 9 0.0 0.0 0.0 0.0 1.519518981071352E-4 10 0.0 0.0 0.0 0.0 1.519518981071352E-4 11 0.0 0.0 0.0 0.0 1.519518981071352E-4 12 0.0 0.0 0.0 1.519518981071352E-4 4.558556943214056E-4 13 0.0 0.0 0.0 1.519518981071352E-4 4.558556943214056E-4 14 0.0 0.0 0.0 1.519518981071352E-4 4.558556943214056E-4 15 0.0 0.0 0.0 1.519518981071352E-4 9.117113886428112E-4 16 0.0 0.0 0.0 1.519518981071352E-4 9.117113886428112E-4 17 0.0 0.0 0.0 1.519518981071352E-4 9.117113886428112E-4 18 0.0 0.0 0.0 1.519518981071352E-4 9.117113886428112E-4 19 0.0 0.0 0.0 1.519518981071352E-4 9.117113886428112E-4 20 0.0 0.0 0.0 1.519518981071352E-4 0.0010636632867499463 21 0.0 0.0 0.0 4.558556943214056E-4 0.0010636632867499463 22 0.0 0.0 0.0 0.0010636632867499463 0.0010636632867499463 23 0.0 0.0 0.0 0.0019753746753927576 0.0010636632867499463 24 0.0 0.0 0.0 0.003039037962142704 0.0010636632867499463 25 0.0 0.0 0.0 0.0031909898602498392 0.0010636632867499463 26 0.0 0.0 0.0 0.004102701248892651 0.0013675670829642167 27 0.0 0.0 0.0 0.005470268331856867 0.0013675670829642167 28 0.0 0.0 0.0 0.009117113886428113 0.0013675670829642167 29 0.0 0.0 0.0 0.014283478422070709 0.0013675670829642167 30 0.0 0.0 0.0 0.023552544206605956 0.001519518981071352 31 0.0 0.0 0.0 0.04680118461699764 0.0016714708791784872 32 0.0 0.0 0.0 0.06959396933306793 0.0016714708791784872 33 0.0 0.0 0.0 0.08949966798510263 0.0016714708791784872 34 0.0 0.0 0.0 0.11669905774627984 0.0016714708791784872 35 0.0 0.0 0.0 0.15119213861659953 0.0016714708791784872 36 0.0 0.0 0.0 0.1937386700865974 0.0016714708791784872 37 0.0 0.0 0.0 0.24950501669191602 0.0016714708791784872 38 0.0 0.0 0.0 0.334901983428126 0.0016714708791784872 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTTCGT 90 4.0735176E-7 22.001368 42 GTATAGA 105 7.739982E-8 20.950499 1 GATTTCG 95 6.852424E-7 20.843401 41 TGCACCG 65 4.931866E-4 20.305868 5 CGTCTTA 55 0.0044798655 20.001244 32 GTATTAG 215 0.0 19.440115 1 CATCGTT 190 1.8189894E-12 18.528875 28 AGTGTGC 230 0.0 18.172281 8 GGTCGGA 185 2.1827873E-11 17.837591 38 ACGCCGC 210 0.0 17.807924 6 CTATAAC 100 2.4821424E-5 17.59842 3 AACGCCG 215 0.0 17.393787 5 CCAGTCG 205 5.456968E-12 17.170494 20 GTATTAT 90 2.2149607E-4 17.109575 1 GTTATAT 90 2.2149607E-4 17.109575 1 ATCGCCA 220 1.8189894E-12 16.998474 16 ATACCGT 170 2.4629117E-9 16.822018 6 TAACGCC 210 9.094947E-12 16.760399 4 AATAACG 210 9.094947E-12 16.760399 2 GTATCAA 1825 0.0 16.634123 1 >>END_MODULE