##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064049_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1270606 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.262506237181313 32.0 32.0 32.0 32.0 32.0 2 31.25694825933452 32.0 32.0 32.0 32.0 32.0 3 31.374315090594568 32.0 32.0 32.0 32.0 32.0 4 31.482598854404905 32.0 32.0 32.0 32.0 32.0 5 31.406076313192287 32.0 32.0 32.0 32.0 32.0 6 34.96876608484455 36.0 36.0 36.0 36.0 36.0 7 34.9981961363318 36.0 36.0 36.0 36.0 36.0 8 34.92686560586051 36.0 36.0 36.0 36.0 36.0 9 35.07148636162587 36.0 36.0 36.0 36.0 36.0 10 34.88615589726477 36.0 36.0 36.0 32.0 36.0 11 35.06869241920784 36.0 36.0 36.0 36.0 36.0 12 34.964990720963065 36.0 36.0 36.0 36.0 36.0 13 35.0179646562349 36.0 36.0 36.0 36.0 36.0 14 34.95812785395315 36.0 36.0 36.0 32.0 36.0 15 34.91673107163039 36.0 36.0 36.0 32.0 36.0 16 34.94005616217773 36.0 36.0 36.0 36.0 36.0 17 34.89694208905042 36.0 36.0 36.0 32.0 36.0 18 34.89810767460566 36.0 36.0 36.0 32.0 36.0 19 34.89933858332166 36.0 36.0 36.0 32.0 36.0 20 34.89468647243913 36.0 36.0 36.0 32.0 36.0 21 34.88730259419521 36.0 36.0 36.0 32.0 36.0 22 34.8679126338141 36.0 36.0 36.0 32.0 36.0 23 34.81567063275319 36.0 36.0 36.0 32.0 36.0 24 34.789955344142875 36.0 36.0 36.0 32.0 36.0 25 34.756951407438656 36.0 36.0 36.0 32.0 36.0 26 34.699542580469476 36.0 36.0 36.0 32.0 36.0 27 34.68807561116507 36.0 36.0 36.0 32.0 36.0 28 34.67144732513462 36.0 36.0 36.0 32.0 36.0 29 34.635651807090476 36.0 36.0 36.0 32.0 36.0 30 34.618112931939564 36.0 36.0 36.0 32.0 36.0 31 34.610083692348375 36.0 36.0 36.0 32.0 36.0 32 34.574553402077434 36.0 36.0 36.0 32.0 36.0 33 34.55285981649701 36.0 36.0 36.0 32.0 36.0 34 34.53841080555262 36.0 36.0 36.0 32.0 36.0 35 34.50649611287842 36.0 36.0 36.0 32.0 36.0 36 34.47822771181625 36.0 36.0 36.0 32.0 36.0 37 34.47594061416363 36.0 36.0 36.0 32.0 36.0 38 34.43058036873744 36.0 36.0 36.0 32.0 36.0 39 34.42741101490155 36.0 36.0 36.0 32.0 36.0 40 34.406831858184205 36.0 36.0 36.0 32.0 36.0 41 34.394204812506786 36.0 36.0 36.0 32.0 36.0 42 34.325252674707976 36.0 36.0 36.0 32.0 36.0 43 34.329534883354874 36.0 36.0 36.0 32.0 36.0 44 34.25808472492653 36.0 36.0 36.0 32.0 36.0 45 34.23466125612503 36.0 36.0 36.0 32.0 36.0 46 34.2130432250438 36.0 36.0 36.0 32.0 36.0 47 34.18854231760278 36.0 36.0 36.0 32.0 36.0 48 34.15161977827903 36.0 36.0 36.0 32.0 36.0 49 34.13482228165143 36.0 36.0 36.0 32.0 36.0 50 33.49692587631414 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 1.0 19 6.0 20 12.0 21 31.0 22 119.0 23 364.0 24 979.0 25 2315.0 26 4770.0 27 9013.0 28 15259.0 29 23759.0 30 35106.0 31 50291.0 32 74650.0 33 120443.0 34 244136.0 35 689350.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.29062832792469 18.274788095071308 11.94664458610357 26.487938990900428 2 15.817699011964406 20.459514466371058 37.073607628509954 26.649178893154584 3 17.987601162597603 24.34458284767154 29.05628272560351 28.61153326412735 4 12.102571528861032 16.035655427410227 36.26836328492074 35.593409758808 5 14.071317151028722 37.15290184368719 33.65024248272084 15.12553852256325 6 34.40033244031972 35.995636720803645 16.519702440728974 13.084328398147651 7 29.886762694336404 30.668279545350803 20.969442927233146 18.475514833079647 8 27.933206674610382 33.58853964171427 19.19879175763376 19.279461926041588 9 27.308086734713953 13.888856095647132 18.358365070632708 40.444692099006204 10 15.3482602922901 27.230406103635563 32.25847580685148 25.16285779722286 11 37.35532493943835 20.954095919584827 22.631169693831133 19.059409447145693 12 24.358553602417746 23.594744236013554 29.381908618335363 22.66479354323334 13 29.54074489159067 19.577507022267415 25.223811408931677 25.657936677210238 14 23.190527347208615 19.652527732851674 25.51304299920117 31.64390192073855 15 24.93010955799018 27.68306888301221 22.289462913990683 25.097358645006928 16 25.521092397292616 25.882889973240992 23.93813946167165 24.657878167794742 17 23.942276362617523 26.153347300422002 25.342238270557516 24.562138066402962 18 24.609475838186682 25.299779631670077 26.269557689280653 23.821186840862584 19 25.441010037730027 25.098811118474178 25.38371454250964 24.07646430128616 20 25.6872748107584 24.725995161333483 25.013418878354916 24.573311149553202 21 26.52718466621439 24.388205313055344 24.578901720911126 24.505708299819144 22 25.514911782251932 24.741029083760033 25.05883019598522 24.685228938002812 23 24.457736502439793 24.375255784668663 25.545726428458998 25.621281284432552 24 24.78773807649929 25.192192664882736 25.301038879269637 24.71903037934834 25 24.913897861141017 24.757040856802856 25.36424195488059 24.964819327175537 26 24.572190451004374 25.465431288379293 25.728783464064943 24.233594796551394 27 24.974892328228893 25.0970462673786 25.056826768083823 24.871234636308685 28 24.449021610977223 24.904884310672948 25.70870436453904 24.93738971381078 29 24.583928208825302 25.023572023353225 25.502410721453455 24.89008904636802 30 24.58272041027869 25.239600771633725 25.609519019700898 24.568159798386684 31 25.02081834596077 24.853878036763074 25.024202802960062 25.101100814316098 32 24.73305225147513 25.163490000920845 24.83584100641682 25.267616741187204 33 24.48450971163397 24.82106005487439 25.411990825933582 25.282439407558062 34 25.069378092106405 24.895283549010134 25.47431318443475 24.561025174448716 35 25.449482595240568 24.881155888843765 25.44775109163432 24.221610424281348 36 24.548388950237975 25.4512568604502 25.123828518851138 24.87652567046069 37 25.288573996621956 25.101254724302237 24.952894712401953 24.657276566673854 38 24.691204493345538 25.02422272788451 25.327488919725365 24.95708385904458 39 25.27147585110444 24.87755351008024 24.848196260689225 25.002774378126098 40 25.479527740633557 25.066407046269674 25.2719048807113 24.182160332385465 41 24.577057572115667 25.189305843157715 25.700811372596245 24.532825212130373 42 25.505379830770064 25.55338943898805 24.991834431389155 23.949396298852726 43 24.86557404918038 24.90264350048954 25.336300988203885 24.895481462126195 44 24.68977035096266 25.280361658472316 24.904080069825774 25.125787920739246 45 24.704724022128286 25.45823164181078 25.041732548081956 24.79531178797898 46 24.638593663426185 25.179207802347253 24.941365914471366 25.2408326197552 47 24.90335092115702 25.026916925866693 25.329771694097797 24.739960458878492 48 25.454732913525387 25.465987607244244 24.51335255288722 24.565926926343145 49 24.765917123997617 25.531069253272282 24.742306175758326 24.960707446971778 50 24.859435159154657 25.672051050379824 24.65818975151662 24.8103240389489 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 13.0 1 15.0 2 17.0 3 63.0 4 109.0 5 139.5 6 170.0 7 164.0 8 158.0 9 215.0 10 272.0 11 396.0 12 520.0 13 1032.5 14 1545.0 15 2054.5 16 2564.0 17 2706.0 18 2848.0 19 2964.5 20 3081.0 21 3571.5 22 4062.0 23 4802.0 24 5542.0 25 6891.0 26 8240.0 27 10233.0 28 12226.0 29 14401.5 30 16577.0 31 18941.5 32 21306.0 33 24707.0 34 28108.0 35 32375.5 36 36643.0 37 43090.0 38 49537.0 39 53449.0 40 57361.0 41 62276.5 42 67192.0 43 69603.0 44 72014.0 45 78080.5 46 84147.0 47 89411.0 48 94675.0 49 97051.5 50 99428.0 51 97729.0 52 96030.0 53 94525.0 54 93020.0 55 92464.0 56 91908.0 57 88453.5 58 84999.0 59 76823.5 60 68648.0 61 60418.5 62 52189.0 63 44674.0 64 37159.0 65 31401.5 66 25644.0 67 21449.0 68 17254.0 69 15374.5 70 13495.0 71 10501.5 72 7508.0 73 6454.5 74 5401.0 75 4271.5 76 3142.0 77 2688.0 78 2234.0 79 1881.0 80 1528.0 81 1206.0 82 884.0 83 749.0 84 614.0 85 453.0 86 292.0 87 203.0 88 114.0 89 90.5 90 67.0 91 55.0 92 43.0 93 33.5 94 24.0 95 25.0 96 26.0 97 19.0 98 12.0 99 14.0 100 16.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008421178555744268 2 3.148104132988511E-4 3 2.3610780997413835E-4 4 0.0 5 0.0 6 1.5740520664942555E-4 7 0.0 8 0.0 9 0.0014953494631695426 10 0.0014953494631695426 11 0.0 12 7.870260332471277E-5 13 3.9351301662356387E-4 14 7.870260332471277E-5 15 0.0036203197529367875 16 4.722156199482767E-4 17 0.0 18 4.722156199482767E-4 19 0.0 20 6.296208265977022E-4 21 0.0 22 0.0 23 4.722156199482767E-4 24 4.722156199482767E-4 25 0.0017314572731436811 26 0.0050369666127816175 27 0.006138803059327597 28 0.0037777249595862135 29 0.0025184833063908087 30 0.004328643182859203 31 0.007240639505873575 32 0.0030694015296637983 33 0.005351777026080469 34 0.0025184833063908087 35 0.0026758885130402344 36 0.007791557729146565 37 0.0037777249595862135 38 0.008263773349094842 39 0.004013832769560351 40 0.0025971859097155218 41 0.003384211942962649 42 0.002124970289767245 43 0.00141664685984483 44 0.0011805390498706915 45 0.0011805390498706915 46 0.0011018364465459787 47 0.002361078099741383 48 0.001967565083117819 49 7.08323429922415E-4 50 0.00141664685984483 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1270606.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.48790534975166 #Duplication Level Percentage of deduplicated Percentage of total 1 80.30227454710037 49.376186567218795 2 12.288606528166584 15.112013501684945 3 3.37941803648006 6.2338000909298845 4 1.4176167161525106 3.486651298600454 5 0.7082868789557247 2.177553828685031 6 0.45211790091061255 1.667986961887209 7 0.2870084049397864 1.235328194626455 8 0.1845114454956212 0.9076177837264495 9 0.14078880201028438 0.7791127679081964 >10 0.7246805768321258 7.88132105887383 >50 0.057010499960600765 2.430864468515423 >100 0.05252970841905095 6.402241848882853 >500 0.004119963661419992 1.6440191374392856 >1k 0.001029990915354998 0.6653024910213203 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.5740520664942555E-4 2 0.0 0.0 0.0 0.0 1.5740520664942555E-4 3 0.0 0.0 0.0 0.0 1.5740520664942555E-4 4 0.0 0.0 0.0 0.0 1.5740520664942555E-4 5 0.0 0.0 0.0 0.0 1.5740520664942555E-4 6 0.0 0.0 0.0 0.0 2.3610780997413832E-4 7 0.0 0.0 0.0 0.0 3.148104132988511E-4 8 0.0 0.0 0.0 0.0 3.148104132988511E-4 9 0.0 0.0 0.0 0.0 3.148104132988511E-4 10 0.0 0.0 0.0 0.0 3.148104132988511E-4 11 0.0 0.0 0.0 0.0 3.148104132988511E-4 12 0.0 0.0 0.0 0.0 7.870260332471277E-4 13 0.0 0.0 0.0 0.0 7.870260332471277E-4 14 0.0 0.0 0.0 7.870260332471277E-5 7.870260332471277E-4 15 0.0 0.0 0.0 7.870260332471277E-5 0.001023133843221266 16 0.0 0.0 0.0 7.870260332471277E-5 0.001023133843221266 17 0.0 0.0 0.0 7.870260332471277E-5 0.001023133843221266 18 0.0 0.0 0.0 7.870260332471277E-5 0.001023133843221266 19 0.0 0.0 0.0 7.870260332471277E-5 0.001023133843221266 20 0.0 0.0 0.0 7.870260332471277E-5 0.0011805390498706915 21 0.0 0.0 0.0 7.870260332471277E-5 0.0011805390498706915 22 0.0 0.0 0.0 7.870260332471277E-5 0.0011805390498706915 23 0.0 0.0 0.0 7.870260332471277E-5 0.0011805390498706915 24 0.0 0.0 0.0 2.3610780997413832E-4 0.0011805390498706915 25 0.0 0.0 0.0 2.3610780997413832E-4 0.0011805390498706915 26 0.0 0.0 0.0 2.3610780997413832E-4 0.0011805390498706915 27 0.0 0.0 0.0 2.3610780997413832E-4 0.0011805390498706915 28 0.0 0.0 0.0 5.509182232729895E-4 0.0011805390498706915 29 0.0 0.0 0.0 0.0011805390498706915 0.0011805390498706915 30 0.0 0.0 0.0 0.0029906989263390853 0.0011805390498706915 31 0.0 0.0 0.0 0.00708323429922415 0.0011805390498706915 32 0.0 0.0 0.0 0.01219890351533048 0.0011805390498706915 33 0.0 0.0 0.0 0.018495111781307503 0.0011805390498706915 34 0.0 0.0 0.0 0.025971859097155214 0.0011805390498706915 35 0.0 0.0 0.0 0.033684714222977065 0.0011805390498706915 36 0.0 0.0 0.0 0.044781781291761566 0.0011805390498706915 37 0.0 0.0 0.0 0.06508705294953747 0.0011805390498706915 38 0.0 0.0 0.0 0.09160983026996566 0.0012592416531954044 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1935 0.0 23.87554 1 GTACGTA 50 0.0025819575 21.997875 11 GTATAAA 185 0.0 20.215855 1 TAGGACG 255 0.0 18.979305 4 ACGTAGT 70 8.128914E-4 18.85532 13 AACGCAG 2455 0.0 18.45923 6 CGCAATA 240 0.0 18.334448 36 CGTAGTC 60 0.0074164364 18.331562 14 GGATAGT 125 4.855865E-7 17.598991 6 TCAACGC 2685 0.0 16.632195 4 CGTTTAG 120 6.398559E-6 16.502302 29 ATCAACG 2710 0.0 16.478113 3 CAACGCA 2735 0.0 16.408566 5 TATCAAC 2790 0.0 16.399849 2 TAAGACT 205 1.05501385E-10 16.09664 4 TAGCGTA 260 0.0 16.076002 7 CGTATAT 265 0.0 15.772682 10 ATAGCGT 265 0.0 15.772682 6 CGTAAAC 140 1.5865808E-6 15.7140045 40 AAGACGG 550 0.0 15.599108 5 >>END_MODULE