##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064048_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 44244 Sequences flagged as poor quality 0 Sequence length 25 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.326733568393454 32.0 32.0 32.0 32.0 32.0 2 30.99037157580689 32.0 32.0 32.0 32.0 32.0 3 30.93895217430612 32.0 32.0 32.0 32.0 32.0 4 30.996926136877317 32.0 32.0 32.0 32.0 32.0 5 30.965690263086522 32.0 32.0 32.0 32.0 32.0 6 34.599561522466324 36.0 36.0 36.0 32.0 36.0 7 34.50137871801826 36.0 36.0 36.0 32.0 36.0 8 34.50619293011482 36.0 36.0 36.0 32.0 36.0 9 34.60663592803544 36.0 36.0 36.0 32.0 36.0 10 34.313692252056775 36.0 36.0 36.0 32.0 36.0 11 34.632424735557365 36.0 36.0 36.0 32.0 36.0 12 34.4485579965645 36.0 36.0 36.0 32.0 36.0 13 34.487455926227284 36.0 36.0 36.0 32.0 36.0 14 34.44688545339481 36.0 36.0 36.0 32.0 36.0 15 34.3753955338577 36.0 36.0 36.0 32.0 36.0 16 34.397274206672094 36.0 36.0 36.0 32.0 36.0 17 34.319274929934004 36.0 36.0 36.0 32.0 36.0 18 34.32040502667029 36.0 36.0 36.0 32.0 36.0 19 34.31342102884007 36.0 36.0 36.0 32.0 36.0 20 34.29393816110659 36.0 36.0 36.0 32.0 36.0 21 34.329943043124494 36.0 36.0 36.0 32.0 36.0 22 34.3349832745683 36.0 36.0 36.0 32.0 36.0 23 34.23506012114637 36.0 36.0 36.0 32.0 36.0 24 34.22391736732664 36.0 36.0 36.0 32.0 36.0 25 33.83505108037248 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 5 1.0 6 1.0 7 1.0 8 2.0 9 5.0 10 7.0 11 2.0 12 3.0 13 5.0 14 1.0 15 7.0 16 13.0 17 16.0 18 11.0 19 24.0 20 36.0 21 53.0 22 83.0 23 132.0 24 168.0 25 286.0 26 467.0 27 559.0 28 814.0 29 1098.0 30 1395.0 31 2012.0 32 2751.0 33 3955.0 34 9008.0 35 21328.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.99099934417332 19.72229132273457 13.727130871344897 24.559578461747215 2 15.337145957187099 21.851759759488235 39.13515224123511 23.67594204208956 3 17.634428045114483 26.112605383902537 30.334742219108108 25.918224351874876 4 11.936621310067357 18.3264771032051 38.698521766647076 31.038379820080465 5 12.922110212015731 38.68948058406039 34.833416210840376 13.554992993083495 6 28.743557283660365 39.483678451939596 19.1246948186997 12.648069445700335 7 28.358276438938372 32.2625129990505 22.338020527196274 17.04119003481485 8 27.460202604920404 32.94591172214182 21.422756874095512 18.171128798842258 9 27.65100974694136 15.314683733236844 20.317058278115745 36.71724824170605 10 14.772007599746676 29.458065683524836 33.956844295666336 21.813082421062155 11 32.58622639375777 24.523351803686534 24.132081872667648 18.758339929888045 12 22.737246917769482 27.490102929532856 30.82230516909852 18.95034498359914 13 28.80182768214617 22.38232034201181 26.57829853649709 22.23755343934493 14 22.490668476416694 21.230630019228595 28.397240131206875 27.881461373147836 15 24.247359254484177 29.080997941688718 24.107122661781005 22.564520142046096 16 22.763050755451008 27.763955487198043 26.63982629150457 22.833167465846376 17 22.08273958969487 28.90683314107349 26.934473321119178 22.075953948112463 18 22.11085972850679 29.00678733031674 27.665158371040725 21.217194570135746 19 24.286231392244694 26.406044975340482 27.90145242296729 21.406271209447535 20 24.35178062355763 26.600751165211094 27.073623240870624 21.973844970360652 21 24.269296896208488 26.712514704551626 27.28033662112026 21.737851778119627 22 24.40497737556561 26.64932126696832 27.762443438914026 21.183257918552037 23 24.11077925604127 27.35315413159562 26.375690107702056 22.160376504661055 24 22.525396502183305 28.389782574266388 26.9983483789226 22.086472544627707 25 23.988145064591297 26.897581502680936 27.524264156919525 21.59000927580824 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 3.0 1 3.0 2 6.0 3 9.0 4 9.0 5 9.0 6 16.5 7 24.0 8 24.0 9 24.0 10 57.5 11 91.0 12 91.0 13 91.0 14 108.5 15 126.0 16 126.0 17 126.0 18 329.5 19 533.0 20 533.0 21 533.0 22 822.5 23 1112.0 24 1112.0 25 1112.0 26 1640.0 27 2168.0 28 2168.0 29 2168.0 30 2624.5 31 3081.0 32 3081.0 33 3081.0 34 3669.0 35 4257.0 36 4257.0 37 4257.0 38 4833.0 39 5409.0 40 5409.0 41 5409.0 42 5608.0 43 5807.0 44 5807.0 45 5807.0 46 5848.0 47 5889.0 48 5889.0 49 5889.0 50 5689.0 51 5489.0 52 5489.0 53 5489.0 54 4744.0 55 3999.0 56 3999.0 57 3999.0 58 3301.0 59 2603.0 60 2603.0 61 2603.0 62 2172.5 63 1742.0 64 1742.0 65 1742.0 66 1322.5 67 903.0 68 903.0 69 903.0 70 628.5 71 354.0 72 354.0 73 354.0 74 303.5 75 253.0 76 253.0 77 253.0 78 173.0 79 93.0 80 93.0 81 93.0 82 69.0 83 45.0 84 45.0 85 45.0 86 26.0 87 7.0 88 7.0 89 7.0 90 5.5 91 4.0 92 4.0 93 4.0 94 3.5 95 3.0 96 3.0 97 3.0 98 121.5 99 240.0 100 240.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.056504836814031276 2 0.011300967362806256 3 0.002260193472561251 4 0.004520386945122502 5 0.004520386945122502 6 0.01808154778049001 7 0.02260193472561251 8 0.04520386945122502 9 0.056504836814031276 10 0.07232619112196004 11 0.0655456107042763 12 0.0881475454298888 13 0.0791067715396438 14 0.0881475454298888 15 0.07458638459452128 16 0.07232619112196004 17 0.07458638459452128 18 0.09944851279269505 19 0.09492812584757254 20 0.10396889973781755 21 0.09040773890245005 22 0.09944851279269505 23 0.10848928668294007 24 0.10170870626525631 25 0.0971883193201338 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 44244.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.22366874604466 #Duplication Level Percentage of deduplicated Percentage of total 1 57.88146279949559 23.86086248982913 2 16.694994243105434 13.76457824789802 3 8.229617851855913 10.177651206943313 4 5.181205109929272 8.54353132628153 5 3.0429299851965568 6.272036886357473 6 2.4453095016174133 6.048277732573908 7 1.4693788036624815 4.2401229545249075 8 0.964965184494764 3.1823524093662416 9 0.8553100498930863 3.173311635475997 >10 3.1964471736389055 19.299792062200524 >50 0.02741378365041943 0.6644968809330078 >100 0.010965513460167772 0.772986167615948 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGGGGGGGGGGGGGGGGGGGGGGGG 231 0.522104692161649 No Hit GTATCAACGCAGAGTACTTTTTTTT 111 0.25088147545429884 No Hit TATCAACGCAGAGTACTTTTTTTTT 75 0.16951451044209384 No Hit TCCTAACACTCCTCGTCCCCATTCT 62 0.14013199529879758 No Hit GTATCAACGCAGAGTACATGGGGTG 54 0.12205044751830757 No Hit GTATAGGGGTCCTAGGAAGATAATA 52 0.11753006057318507 No Hit GTATCAACGCAGAGTACATGGGGAG 51 0.11526986710062381 No Hit GTATCAACGCAGAGTACATGGGGGG 50 0.11300967362806255 No Hit GTGTAGGGACACATCAGTGCATAGC 49 0.1107494801555013 No Hit GGTATCAACGCAGAGTACATGGGGA 49 0.1107494801555013 No Hit CATCTAGCCTATCAGTTTACTCCAT 45 0.10170870626525631 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 110 0.0 16.377829 1 ACTTTTT 35 0.0021204972 16.291544 16 AGTACTT 40 0.005160003 14.255102 13 GAGTACT 40 0.005160003 14.255102 12 TACTTTT 40 0.005160003 14.255102 15 CTTTTTT 40 0.005160003 14.255102 17 TATCAAC 150 1.0913936E-11 12.024009 2 ATCAACG 155 2.1827873E-11 11.636138 3 TCAACGC 160 3.8198777E-11 11.272509 4 AACGCAG 170 9.094947E-12 11.180472 6 CAACGCA 170 9.094947E-12 11.16781 5 ACGCAGA 175 1.6370905E-11 10.86103 7 CAGAGTA 175 1.6370905E-11 10.86103 10 AGAGTAC 175 1.6370905E-11 10.86103 11 CGCAGAG 175 1.6370905E-11 10.86103 8 GCAGAGT 180 2.910383E-11 10.559336 9 AGTACAT 140 9.577634E-7 9.503401 13 GAGTACA 140 9.577634E-7 9.503401 12 CATGGGG 100 0.002782053 8.553061 17 ACATGGG 220 5.5025946E-5 6.4795914 16 >>END_MODULE